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The map label for this gene is yybF [H]

Identifier: 92113420

GI number: 92113420

Start: 1480239

End: 1481441

Strand: Direct

Name: yybF [H]

Synonym: Csal_1294

Alternate gene names: 92113420

Gene position: 1480239-1481441 (Clockwise)

Preceding gene: 92113419

Following gene: 92113422

Centisome position: 40.04

GC content: 65.59

Gene sequence:

>1203_bases
ATGATCGAACCGCGCACGCGTGCCTGGTGGCGTGCGACCCTGGCACTGTGCCTGGGCTCTTTTACCGTCTTCATCAACCT
GTACGTGGCCCAGCCCTTGTTGCCCGCCATTCGCGAGAGCTTTGAGGTCTCGACGCTGGCGGCGGGCAGTGCCATGTCGG
TGAGCATGCTGACCCTGGCGTTGTCGTTGCTGTTCTACGGGCCGCTTTCCGATGCCATCGGGCGTGCCGCCATCATGCGC
GTGACGCTGGTGCTGGCCAGCGTGTGCACGCTGGTCATGGCATTTGCGCCCAACTTCGCCAGTCTGATCGCCCTGCGGGC
TCTGCAGGGATTCTTGCTGGGCGGTTTGCCAGCGGTGGCCATTGCCTGGATGGGGGACGAGTTCGACAAGCCGGCGCTGT
TGCTGGCCGTGGGACTGTACATCAGCGGCAACACGCTCGGCGGCATCGGAGGTCGCGTCATCGGTGGCGCGGTGGCCGAG
CATTGGAACTGGCATGCGAGCTTCATGGTCATCGCATGCCTGAGCCTCGTCTGCACCAGCATCTTCTGGCGAGCCCTGCC
GCCCGCCAGGCAGTTTCGGCCGTCGCCGCTGCGGGTGGGAAAGGCGGTACGCGACATGGGCGGGCACTTGCGCGACCCCC
GACTGATTGCCGCCTATCTCATCGGTGGGTTCAACTTCTTCATCTTCATCAACCAGTACAGCTATGTCACCTTCCGTCTC
AGCGAGGCCCCGTTTTCGCTGACCTCCCAGTGGTTGGGGCTGATCTTTCTGACCTACCTCGGCGGCACCCTGGGGTCGGC
CCTTTCCGGCCGGGTCGCGCAGCGGCTTTCGCAGCCCGTCTGCATGATGCTGGGCATCACGACGCTGATGCTGGGCTCGC
TGGTGACGCTGATGCCATCGTTGATCGCCATCATCGCCGGGCTGACCGTCAATGCCGTGGGCTTCTTCCTGGCGCATTCC
ATGGCCTCGAGCTGGGTCGGGCGCCACGCCCAACGCGCGCGTGGCAGCGCTTCCTCGCTATACCTGGTGTTCTACTATCT
GGGGGCGAGCCTCGGTGGGTTGTATCTGGAGCCTTTCTGGGCGCGCTGGCAGTGGGGCGGCGTGGTCGCCGCCTCCTGGC
TGGTGCTGGCGGGAACGCTGAGCGTCGCGGCCTGGCTGTGGCGCCGCGAACGCCAGTTGATCGAGCGCGGCGCCACGGCA
TGA

Upstream 100 bases:

>100_bases
CTGACGAGCACTGACGGCGTGTCGCAGCTGTGTGCCTCGAGACGGCCTGAGGCATGATCTCACTTTTGCGCGCGATCATG
TTGCGCTAATGGAGGGCATG

Downstream 100 bases:

>100_bases
AACGGTGAGGGCGGCAATCGTCGCCGCCGCATCGAGTGCCTGCCTGTGCCGCGCGTTGAGTCAGGGAGCCCCGCATCGTT
CACGGGGTGCCGGCCGCATC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MIEPRTRAWWRATLALCLGSFTVFINLYVAQPLLPAIRESFEVSTLAAGSAMSVSMLTLALSLLFYGPLSDAIGRAAIMR
VTLVLASVCTLVMAFAPNFASLIALRALQGFLLGGLPAVAIAWMGDEFDKPALLLAVGLYISGNTLGGIGGRVIGGAVAE
HWNWHASFMVIACLSLVCTSIFWRALPPARQFRPSPLRVGKAVRDMGGHLRDPRLIAAYLIGGFNFFIFINQYSYVTFRL
SEAPFSLTSQWLGLIFLTYLGGTLGSALSGRVAQRLSQPVCMMLGITTLMLGSLVTLMPSLIAIIAGLTVNAVGFFLAHS
MASSWVGRHAQRARGSASSLYLVFYYLGASLGGLYLEPFWARWQWGGVVAASWLVLAGTLSVAAWLWRRERQLIERGATA

Sequences:

>Translated_400_residues
MIEPRTRAWWRATLALCLGSFTVFINLYVAQPLLPAIRESFEVSTLAAGSAMSVSMLTLALSLLFYGPLSDAIGRAAIMR
VTLVLASVCTLVMAFAPNFASLIALRALQGFLLGGLPAVAIAWMGDEFDKPALLLAVGLYISGNTLGGIGGRVIGGAVAE
HWNWHASFMVIACLSLVCTSIFWRALPPARQFRPSPLRVGKAVRDMGGHLRDPRLIAAYLIGGFNFFIFINQYSYVTFRL
SEAPFSLTSQWLGLIFLTYLGGTLGSALSGRVAQRLSQPVCMMLGITTLMLGSLVTLMPSLIAIIAGLTVNAVGFFLAHS
MASSWVGRHAQRARGSASSLYLVFYYLGASLGGLYLEPFWARWQWGGVVAASWLVLAGTLSVAAWLWRRERQLIERGATA
>Mature_400_residues
MIEPRTRAWWRATLALCLGSFTVFINLYVAQPLLPAIRESFEVSTLAAGSAMSVSMLTLALSLLFYGPLSDAIGRAAIMR
VTLVLASVCTLVMAFAPNFASLIALRALQGFLLGGLPAVAIAWMGDEFDKPALLLAVGLYISGNTLGGIGGRVIGGAVAE
HWNWHASFMVIACLSLVCTSIFWRALPPARQFRPSPLRVGKAVRDMGGHLRDPRLIAAYLIGGFNFFIFINQYSYVTFRL
SEAPFSLTSQWLGLIFLTYLGGTLGSALSGRVAQRLSQPVCMMLGITTLMLGSLVTLMPSLIAIIAGLTVNAVGFFLAHS
MASSWVGRHAQRARGSASSLYLVFYYLGASLGGLYLEPFWARWQWGGVVAASWLVLAGTLSVAAWLWRRERQLIERGATA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=388, Percent_Identity=37.6288659793814, Blast_Score=246, Evalue=2e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43251; Mature: 43251

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEPRTRAWWRATLALCLGSFTVFINLYVAQPLLPAIRESFEVSTLAAGSAMSVSMLTLA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHH
LSLLFYGPLSDAIGRAAIMRVTLVLASVCTLVMAFAPNFASLIALRALQGFLLGGLPAVA
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHH
IAWMGDEFDKPALLLAVGLYISGNTLGGIGGRVIGGAVAEHWNWHASFMVIACLSLVCTS
HHHCCCCCCCCHHHHHHHHHEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
IFWRALPPARQFRPSPLRVGKAVRDMGGHLRDPRLIAAYLIGGFNFFIFINQYSYVTFRL
HHHHCCCCHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEEECCEEEEEEE
SEAPFSLTSQWLGLIFLTYLGGTLGSALSGRVAQRLSQPVCMMLGITTLMLGSLVTLMPS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LIAIIAGLTVNAVGFFLAHSMASSWVGRHAQRARGSASSLYLVFYYLGASLGGLYLEPFW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHCCHH
ARWQWGGVVAASWLVLAGTLSVAAWLWRRERQLIERGATA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIEPRTRAWWRATLALCLGSFTVFINLYVAQPLLPAIRESFEVSTLAAGSAMSVSMLTLA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHH
LSLLFYGPLSDAIGRAAIMRVTLVLASVCTLVMAFAPNFASLIALRALQGFLLGGLPAVA
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHH
IAWMGDEFDKPALLLAVGLYISGNTLGGIGGRVIGGAVAEHWNWHASFMVIACLSLVCTS
HHHCCCCCCCCHHHHHHHHHEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
IFWRALPPARQFRPSPLRVGKAVRDMGGHLRDPRLIAAYLIGGFNFFIFINQYSYVTFRL
HHHHCCCCHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEEECCEEEEEEE
SEAPFSLTSQWLGLIFLTYLGGTLGSALSGRVAQRLSQPVCMMLGITTLMLGSLVTLMPS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LIAIIAGLTVNAVGFFLAHSMASSWVGRHAQRARGSASSLYLVFYYLGASLGGLYLEPFW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHCCHH
ARWQWGGVVAASWLVLAGTLSVAAWLWRRERQLIERGATA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]