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The map label for this gene is yfdH [C]

Identifier: 92113372

GI number: 92113372

Start: 1422665

End: 1423693

Strand: Direct

Name: yfdH [C]

Synonym: Csal_1246

Alternate gene names: 92113372

Gene position: 1422665-1423693 (Clockwise)

Preceding gene: 92113371

Following gene: 92113373

Centisome position: 38.49

GC content: 63.46

Gene sequence:

>1029_bases
ATGGAGGGTCCCACGGTAGTGTCTGAACATGAAGGTCATGAGGCGTCCCCGCATCGCGCAGCGGGCGATTGGCTGCTATC
CATCGTGGTGCCGGTCATGAACGAGGAGGGCGCCATCGGCGCGTTTCTTGCGGCCGTCGACAAGGCGCTCGATGGGCACG
TCGCACGCTGGGAGGTCGTGTTCGTCGACGATGGCTCACGCGATGCGACGCTGGCGACCCTGCGCGACGCCAGCCGAGCG
GATGCGCGCGTGCGCTATCTGTCGCTGACGCGCAATTTCGGCAAGGAAGCCGCCCTGACGGCGGGACTGGCGCACGCGCA
CGGCGACGCCATCGTGCCCATGGACGTCGACCTGCAGGATCCCCCGCACGTGATCCTCGAATTCGTGCGCCTGTGGCGTG
AAGAAGGATTCGACATGGTGTACGGCGTTCGTGGCACGCGGGAGGAGGATACGCATACCAAGCGTGCCACCGCCGGCTTG
TTCTATCGCTTCTTCAACCGCCTGTCGGATACACCGATTCCGCACAATGCCGGGGACTTTCGGCTCATGGACCGGCGAGT
GGTGGATGCGCTCAATCGCCTGCCCGAGCGCAGTCGGTTCATGAAAGGATTGTTTTCCTGGCCCGGGTATCGCACCACCG
GCGTGCGCTACGCGCGTCCTTCCCGCGAGACGGGCAGCAGCAAGTTCAACTACTGGAAACTTTGGAACTTCGCCCTCGAT
GGCGTCGTGAGCTTTTCCACCTGGCCACTGCGCATCTGGTCATACTGCGGCGCGGTGATCGCCCTGATTGCCTTCCTGTA
CATCGTGCTGCTGGTAGGACGCGTGGTGCTGTTCGGCAGCGATGTGCCCGGCTATGCCTCGCTGATGACCGCGATTCTGT
TTTTCGGCGGCATGCAACTGCTATCGATCGGCATCCTGGGCGAGTACGTGGGGCGGTTGTTCATCGAGACCAAGCAGCGT
CCGTTGTACCTGGTGGCCGAAGACAGCGAGACGCTGCATGCCCCCCGCCGTGAAGGTCCCGCTGCATGA

Upstream 100 bases:

>100_bases
CAAAGGACCTTCATGGTTGCGGCCGCCCTGGTGCTGGGGAGGCATGGCGGTGTTGGTGGCATGGCTGTTTTGGGTGAGCT
AGCACAAGCGGAGGAGTGAC

Downstream 100 bases:

>100_bases
GGCGATTGGCGGGCGAGGCCGGTACCGCGGCCCGTTTCGGGCTGGTGGGCATCGCCGCCACCGGCGTGCACCTGCTGGTG
GCCGGCGTGCTGCTCGGGAC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MEGPTVVSEHEGHEASPHRAAGDWLLSIVVPVMNEEGAIGAFLAAVDKALDGHVARWEVVFVDDGSRDATLATLRDASRA
DARVRYLSLTRNFGKEAALTAGLAHAHGDAIVPMDVDLQDPPHVILEFVRLWREEGFDMVYGVRGTREEDTHTKRATAGL
FYRFFNRLSDTPIPHNAGDFRLMDRRVVDALNRLPERSRFMKGLFSWPGYRTTGVRYARPSRETGSSKFNYWKLWNFALD
GVVSFSTWPLRIWSYCGAVIALIAFLYIVLLVGRVVLFGSDVPGYASLMTAILFFGGMQLLSIGILGEYVGRLFIETKQR
PLYLVAEDSETLHAPRREGPAA

Sequences:

>Translated_342_residues
MEGPTVVSEHEGHEASPHRAAGDWLLSIVVPVMNEEGAIGAFLAAVDKALDGHVARWEVVFVDDGSRDATLATLRDASRA
DARVRYLSLTRNFGKEAALTAGLAHAHGDAIVPMDVDLQDPPHVILEFVRLWREEGFDMVYGVRGTREEDTHTKRATAGL
FYRFFNRLSDTPIPHNAGDFRLMDRRVVDALNRLPERSRFMKGLFSWPGYRTTGVRYARPSRETGSSKFNYWKLWNFALD
GVVSFSTWPLRIWSYCGAVIALIAFLYIVLLVGRVVLFGSDVPGYASLMTAILFFGGMQLLSIGILGEYVGRLFIETKQR
PLYLVAEDSETLHAPRREGPAA
>Mature_342_residues
MEGPTVVSEHEGHEASPHRAAGDWLLSIVVPVMNEEGAIGAFLAAVDKALDGHVARWEVVFVDDGSRDATLATLRDASRA
DARVRYLSLTRNFGKEAALTAGLAHAHGDAIVPMDVDLQDPPHVILEFVRLWREEGFDMVYGVRGTREEDTHTKRATAGL
FYRFFNRLSDTPIPHNAGDFRLMDRRVVDALNRLPERSRFMKGLFSWPGYRTTGVRYARPSRETGSSKFNYWKLWNFALD
GVVSFSTWPLRIWSYCGAVIALIAFLYIVLLVGRVVLFGSDVPGYASLMTAILFFGGMQLLSIGILGEYVGRLFIETKQR
PLYLVAEDSETLHAPRREGPAA

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788692, Length=300, Percent_Identity=50.3333333333333, Blast_Score=305, Evalue=3e-84,
Organism=Escherichia coli, GI1788588, Length=312, Percent_Identity=33.3333333333333, Blast_Score=166, Evalue=2e-42,
Organism=Drosophila melanogaster, GI24585265, Length=169, Percent_Identity=30.1775147928994, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 38190; Mature: 38190

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGPTVVSEHEGHEASPHRAAGDWLLSIVVPVMNEEGAIGAFLAAVDKALDGHVARWEVV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEE
FVDDGSRDATLATLRDASRADARVRYLSLTRNFGKEAALTAGLAHAHGDAIVPMDVDLQD
EEECCCCCCHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCC
PPHVILEFVRLWREEGFDMVYGVRGTREEDTHTKRATAGLFYRFFNRLSDTPIPHNAGDF
CHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
RLMDRRVVDALNRLPERSRFMKGLFSWPGYRTTGVRYARPSRETGSSKFNYWKLWNFALD
HHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCEEEHHHHHH
GVVSFSTWPLRIWSYCGAVIALIAFLYIVLLVGRVVLFGSDVPGYASLMTAILFFGGMQL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHH
LSIGILGEYVGRLFIETKQRPLYLVAEDSETLHAPRREGPAA
HHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHCCCCCCCCCC
>Mature Secondary Structure
MEGPTVVSEHEGHEASPHRAAGDWLLSIVVPVMNEEGAIGAFLAAVDKALDGHVARWEVV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEE
FVDDGSRDATLATLRDASRADARVRYLSLTRNFGKEAALTAGLAHAHGDAIVPMDVDLQD
EEECCCCCCHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCC
PPHVILEFVRLWREEGFDMVYGVRGTREEDTHTKRATAGLFYRFFNRLSDTPIPHNAGDF
CHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
RLMDRRVVDALNRLPERSRFMKGLFSWPGYRTTGVRYARPSRETGSSKFNYWKLWNFALD
HHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCEEEHHHHHH
GVVSFSTWPLRIWSYCGAVIALIAFLYIVLLVGRVVLFGSDVPGYASLMTAILFFGGMQL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHH
LSIGILGEYVGRLFIETKQRPLYLVAEDSETLHAPRREGPAA
HHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]