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The map label for this gene is nrtC [H]

Identifier: 92113260

GI number: 92113260

Start: 1291995

End: 1293215

Strand: Direct

Name: nrtC [H]

Synonym: Csal_1133

Alternate gene names: 92113260

Gene position: 1291995-1293215 (Clockwise)

Preceding gene: 92113259

Following gene: 92113263

Centisome position: 34.95

GC content: 66.18

Gene sequence:

>1221_bases
ATGAACGATCGCCAGACGCCTCGAGATGCGTGGCCTTCGCCGGAACTCGACACGCTGACGCTGGGCATGCTGCCGCTCAA
CGATGCCGCGCCGTTGGTGGTAGCGCGTGAGCGCGGCTTCTTCGCCGAGCAGGGGCTGGACGTCACGTTGAGCGTGGAGT
CGTCGTGGGCGGGGATACGCGATGCCATGCAGTTGGCACTGCTCGATGGCGCACAGATGCTGCCATTGATGCCACTGGCC
TCGACGCTTGGACTGGACGGTCGACGAACGCCGATGCTCTCGGCGCTGACCCTCAGTCTCGGCGGCAATGCCATCACCGT
GTCCAACGCCTTGTACGACGACATGCTGGCTGCCGATCCCGACGCCATGGCGGCCTCACCGACCTCCGCCCGAGCGCTGG
CGACGGTGGTGAGACAGCGGCGGGAGAAGGGGGCGCCACCGCTGCGTTTCGCCAGCGTGTATCCCTTTTCCTCGCATCGC
TATTTATTGCGCTACTGGCTGGCGGAAGGCGGTGTCGATCCCGATCGCGATCTCGAATTGCGCGTGGTACCGCCGCCTCT
GGTGGCACAGCAGCTCGAGGCCGGATGGCTGGACGGCTATTGCGTGGGCGAGCCCTGGAATACGCTCGCGGCACGCCGCG
AACGTGGGCGTGTGCTGATCGGCAGCCACGCCATCTGGCAGAACGGCCAGGAGAAGGTCTTCGCGGTACGCGAAGAGTGG
GCCCAGGCGTATCCGGCCACGCACCGTGCCGTCCTGCGTGCCTTGTTGAAGGCATGCGCATGGCTCGAGGCTCCGGCGCA
CCGAGGCGAGGCGGCACGCCTGATGTGCGAGCGGGGGTATCTGGATGTCGCGCCCAGCGTGGTCGAGGACAGCATGCTGG
CGGAGGGGGCGTCGCTGACGCATGGCATGAGTGTCTTTCATCGTCATGCCGCGAATTTCCCGTGGCGCTCCCATTTGCTC
TGGTACGCCGGGCAGATGCGGCGCTGGCAGCACCTGGACGTCGACGACGCGGTGCTTGATGAGTGCCTGTCCCGTTGTGT
CCGGCCGGACCTGTTTCGTGAGGCCGCCGATGACCTGGGCATCAATTATCCGTTGGTGGATGCCAAGAGCGAGGGCGAGC
ATGGGGGCGCCTGGGTGATGGAAGGGCGGCATGGTCCGCTCGACATGGGCGGCGACCGGCTTCTGGGCGGTGCCCGATTC
GCACCTTCCCTGCATTCATGA

Upstream 100 bases:

>100_bases
TCAATGGCTGCGCAAGCGTGCCATGAACCGCCGATTGACCATTTTCGAGGTGGCCCAGGCGGTCCTGGCCACCGACGATT
CCGAGTCGTAGGAGACATTG

Downstream 100 bases:

>100_bases
CCCCTGAAAACGCCACGCCCCACCAGAAGGTGGGGCGTGGTGCTGATTGCTCGACGAGCGAGGCCGGGATCAGCCTTCGT
CGCCGCTGTCCTCGTCGAGA

Product: nitrate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MNDRQTPRDAWPSPELDTLTLGMLPLNDAAPLVVARERGFFAEQGLDVTLSVESSWAGIRDAMQLALLDGAQMLPLMPLA
STLGLDGRRTPMLSALTLSLGGNAITVSNALYDDMLAADPDAMAASPTSARALATVVRQRREKGAPPLRFASVYPFSSHR
YLLRYWLAEGGVDPDRDLELRVVPPPLVAQQLEAGWLDGYCVGEPWNTLAARRERGRVLIGSHAIWQNGQEKVFAVREEW
AQAYPATHRAVLRALLKACAWLEAPAHRGEAARLMCERGYLDVAPSVVEDSMLAEGASLTHGMSVFHRHAANFPWRSHLL
WYAGQMRRWQHLDVDDAVLDECLSRCVRPDLFREAADDLGINYPLVDAKSEGEHGGAWVMEGRHGPLDMGGDRLLGGARF
APSLHS

Sequences:

>Translated_406_residues
MNDRQTPRDAWPSPELDTLTLGMLPLNDAAPLVVARERGFFAEQGLDVTLSVESSWAGIRDAMQLALLDGAQMLPLMPLA
STLGLDGRRTPMLSALTLSLGGNAITVSNALYDDMLAADPDAMAASPTSARALATVVRQRREKGAPPLRFASVYPFSSHR
YLLRYWLAEGGVDPDRDLELRVVPPPLVAQQLEAGWLDGYCVGEPWNTLAARRERGRVLIGSHAIWQNGQEKVFAVREEW
AQAYPATHRAVLRALLKACAWLEAPAHRGEAARLMCERGYLDVAPSVVEDSMLAEGASLTHGMSVFHRHAANFPWRSHLL
WYAGQMRRWQHLDVDDAVLDECLSRCVRPDLFREAADDLGINYPLVDAKSEGEHGGAWVMEGRHGPLDMGGDRLLGGARF
APSLHS
>Mature_406_residues
MNDRQTPRDAWPSPELDTLTLGMLPLNDAAPLVVARERGFFAEQGLDVTLSVESSWAGIRDAMQLALLDGAQMLPLMPLA
STLGLDGRRTPMLSALTLSLGGNAITVSNALYDDMLAADPDAMAASPTSARALATVVRQRREKGAPPLRFASVYPFSSHR
YLLRYWLAEGGVDPDRDLELRVVPPPLVAQQLEAGWLDGYCVGEPWNTLAARRERGRVLIGSHAIWQNGQEKVFAVREEW
AQAYPATHRAVLRALLKACAWLEAPAHRGEAARLMCERGYLDVAPSVVEDSMLAEGASLTHGMSVFHRHAANFPWRSHLL
WYAGQMRRWQHLDVDDAVLDECLSRCVRPDLFREAADDLGINYPLVDAKSEGEHGGAWVMEGRHGPLDMGGDRLLGGARF
APSLHS

Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate. Probably responsible for energy coupling to the transport system [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR015168
- InterPro:   IPR005890 [H]

Pfam domain/function: PF00005 ABC_tran; PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 44639; Mature: 44639

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDRQTPRDAWPSPELDTLTLGMLPLNDAAPLVVARERGFFAEQGLDVTLSVESSWAGIR
CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEECCCCHHHCCCCEEEEECCCHHHHH
DAMQLALLDGAQMLPLMPLASTLGLDGRRTPMLSALTLSLGGNAITVSNALYDDMLAADP
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHEEEEECCCCEEEECHHHHHHHHHCCC
DAMAASPTSARALATVVRQRREKGAPPLRFASVYPFSSHRYLLRYWLAEGGVDPDRDLEL
CHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEE
RVVPPPLVAQQLEAGWLDGYCVGEPWNTLAARRERGRVLIGSHAIWQNGQEKVFAVREEW
EECCCHHHHHHHHCCCCCCEEECCCHHHHHHHHHCCCEEEECHHHHCCCCHHHHHHHHHH
AQAYPATHRAVLRALLKACAWLEAPAHRGEAARLMCERGYLDVAPSVVEDSMLAEGASLT
HHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHH
HGMSVFHRHAANFPWRSHLLWYAGQMRRWQHLDVDDAVLDECLSRCVRPDLFREAADDLG
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCC
INYPLVDAKSEGEHGGAWVMEGRHGPLDMGGDRLLGGARFAPSLHS
CCCCEECCCCCCCCCCEEEECCCCCCCCCCCCEEECCCCCCCCCCC
>Mature Secondary Structure
MNDRQTPRDAWPSPELDTLTLGMLPLNDAAPLVVARERGFFAEQGLDVTLSVESSWAGIR
CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEECCCCHHHCCCCEEEEECCCHHHHH
DAMQLALLDGAQMLPLMPLASTLGLDGRRTPMLSALTLSLGGNAITVSNALYDDMLAADP
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHEEEEECCCCEEEECHHHHHHHHHCCC
DAMAASPTSARALATVVRQRREKGAPPLRFASVYPFSSHRYLLRYWLAEGGVDPDRDLEL
CHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEE
RVVPPPLVAQQLEAGWLDGYCVGEPWNTLAARRERGRVLIGSHAIWQNGQEKVFAVREEW
EECCCHHHHHHHHCCCCCCEEECCCHHHHHHHHHCCCEEEECHHHHCCCCHHHHHHHHHH
AQAYPATHRAVLRALLKACAWLEAPAHRGEAARLMCERGYLDVAPSVVEDSMLAEGASLT
HHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHH
HGMSVFHRHAANFPWRSHLLWYAGQMRRWQHLDVDDAVLDECLSRCVRPDLFREAADDLG
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCC
INYPLVDAKSEGEHGGAWVMEGRHGPLDMGGDRLLGGARFAPSLHS
CCCCEECCCCCCCCCCEEEECCCCCCCCCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]