| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is katE [H]
Identifier: 92113227
GI number: 92113227
Start: 1248082
End: 1250232
Strand: Direct
Name: katE [H]
Synonym: Csal_1100
Alternate gene names: 92113227
Gene position: 1248082-1250232 (Clockwise)
Preceding gene: 92113226
Following gene: 92113229
Centisome position: 33.76
GC content: 61.46
Gene sequence:
>2151_bases ATGGCCAAGAACCCCCATACGCATTCCAATAGCGATGAGGCGCACGATACGGCCCACAAGACGACCGAGTCGAGCAAGTC CGATCGCCTGGAAGCGTTTCGCAGCGATGCAAAAGGGCACGACCTGCGTACCAATCAGGGTACTCGGATCGCCGACAACC ACAATTCGCTGAAGGCCGGCGAGCGTGGCCCGACCTTGATGGAAGATTTCATCTTCCGCGAAAAGCTCAACCATTTCGAC AACGAACGCATTCCCGAGCGCATCGTTCACGCTCGCGGCGCGGCGGCGCACGGCTATTTCCAGCCTTATGCGGCGGCCGC CCAGTACTCCAAGGCAGGGTTGTTTCAGGACCCGGACAAGAAAACGCCCGTCTTCGTGCGGTTCTCCACGGTGCAGGGGC CGCGCGGTTCCAACGATACGGTGCGCGACGTGCGGGGCTTCGCCACCAAGTTCTACACCGACGAAGGCAACTGGGACCTG GTCGGCAACGACATGCCGGTGTTCTTCATTCAGGATGCGATCAAGTTTCCCGACTTCGTGCATGCCGTGAAGCCCGAGCC GCACAACGAGATTCCGCAGGGGCAGTCGGCTCACGACACCTTCTGGGATTTCGTCTCGCTGATGCCGGAAAGCGCTCACA TGGTGCTCTGGACCATGTCGGATCGCGCCTTCCCGCGTCATTACCGCAACATGGAAGGTTTCGGCGTGCATACCTTCCGG CTGGTCGACAAGCAGGGCAAGGCACGGTTCGTGAAGTTCCACTGGAAGCCGCTGGCGGGCACTTGTTCGTTGATCTGGGA CGAGGCGCAGAAACTCTGGGGGCGCGATCCGGACTTCAATCGCCGCAATATGTGGGACGATATCGAGAGCGGCGATTACC TCGAATACGAGTTTGGCATTCAGGTCATCGAGGAAGAGGACGAGCACAAGTTCGACTTCGATATACTCGATCCGACCAAG CTCATCCCCGAGGAGCAGGTGCCGGTCACCCCCATCGGCAAGATGGTGCTCGATCGCAACCCTGACAATTTCTTCGCCGA GACCGAGCAGGTGGCATTCAATCCGGGCAATGTCGTGCCGGGTATCGACTTCACCAATGACCCGCTGTTGCAGGGACGCC TGTTCTCCTACCTGGACACCCAGATGCTGCGTCTGGGCGGGCCCAACTTCCACGAAATCCCGATCAACCAGCCGGTGTGC CCGTTCCACAACAACCAGCGCGATTCCATGCATCGCCAGACCATCAACAAGGGGCAGGCATCCTACGAGCCCAATTCGAT CGATGACGGCTACCCGAGCGAAACGCCGCCGGCACCGGAAAATGGCGGCTTCGAGACGGTCAACGAGCGCGTCGATGCCA ACAAGATCCGTGCGCGTAGCGCGTCGTTCGGCGATCACTATTCGCAGGCCACGCTGTTCTGGAATTCGCAGACCGACGTC GAGAAGGAACACATCATCGCCGCCTACACCTTCGAATTGTCCAAGGTGGAACGGCCGTGGATCCGCGAACGGGTGATCCA GAAGATCCTGCCCAACATCGACCTTGAACTGGCGCGGCGAGTCGGTGAAAACCACGGTATCGAAACGCCTGCCGAGAAAC CGGCCCCCGCCGAGGAACTGGGCAATGGCTCGCAACAGGCTTCCGAGGCGCTGAGCCTGATGGCGCGCCTGCCGCATGAC ATCAAGTACCGCAAGGTGGCGTTACTGGTGGCCGACGGCGTCGATGGCGATCAGGTGGAAGCCCTCAAGGCCAAGCTCGA GGCCGAGGGAGCCAAGGGCATTGTCATTGCACCGAGCATGGCGCCGGTCAAGGCGACCAACGGGCAGCAGGTCGTCCCCG ATGCCATGCTCAACGGCTTGCCGTCGGTGACACTGGATGCGGTGATCGTGGTCGGCGGCGCCGAAAGCGCCAAGGCGCTG TCGCAGTCCGGGCTGGGACTGTATTACGTCCAGGAGGCCTACAAGCACCTCAAGGCGATCGCCGCCATCGGCGAGGGTCG GGATCTGCTGTCCGCCGCGGGCGTGCCCACCCAGGAAGACGGTATCTTCCTGGGAGCCACGGTGGACGATGTCTTCACTC CGTTCACCGAGGCGATGGGCCAGCATCGAGTCTGGCCGCGCGATGCCAGGGCCAACAGCATGCCGGCCTGA
Upstream 100 bases:
>100_bases CAGCGTTGTCGAACGGGCAGGCCAGGGAACCGATAGGCCGCGTTCGAATGACGTCTTGCAAGTGCGCGGGGGCCATTCTG CAAACGAGGAGAGTTTGACC
Downstream 100 bases:
>100_bases ACGCGTCGCCGGTCGCCGGCCGGTAACGCCCCCGCACGTCTTGCGGCAGCACGGCAATGTGTCGCCACCGAAACCCGACG GATACGTCCGGCGGGTTTTT
Product: catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 716; Mature: 715
Protein sequence:
>716_residues MAKNPHTHSNSDEAHDTAHKTTESSKSDRLEAFRSDAKGHDLRTNQGTRIADNHNSLKAGERGPTLMEDFIFREKLNHFD NERIPERIVHARGAAAHGYFQPYAAAAQYSKAGLFQDPDKKTPVFVRFSTVQGPRGSNDTVRDVRGFATKFYTDEGNWDL VGNDMPVFFIQDAIKFPDFVHAVKPEPHNEIPQGQSAHDTFWDFVSLMPESAHMVLWTMSDRAFPRHYRNMEGFGVHTFR LVDKQGKARFVKFHWKPLAGTCSLIWDEAQKLWGRDPDFNRRNMWDDIESGDYLEYEFGIQVIEEEDEHKFDFDILDPTK LIPEEQVPVTPIGKMVLDRNPDNFFAETEQVAFNPGNVVPGIDFTNDPLLQGRLFSYLDTQMLRLGGPNFHEIPINQPVC PFHNNQRDSMHRQTINKGQASYEPNSIDDGYPSETPPAPENGGFETVNERVDANKIRARSASFGDHYSQATLFWNSQTDV EKEHIIAAYTFELSKVERPWIRERVIQKILPNIDLELARRVGENHGIETPAEKPAPAEELGNGSQQASEALSLMARLPHD IKYRKVALLVADGVDGDQVEALKAKLEAEGAKGIVIAPSMAPVKATNGQQVVPDAMLNGLPSVTLDAVIVVGGAESAKAL SQSGLGLYYVQEAYKHLKAIAAIGEGRDLLSAAGVPTQEDGIFLGATVDDVFTPFTEAMGQHRVWPRDARANSMPA
Sequences:
>Translated_716_residues MAKNPHTHSNSDEAHDTAHKTTESSKSDRLEAFRSDAKGHDLRTNQGTRIADNHNSLKAGERGPTLMEDFIFREKLNHFD NERIPERIVHARGAAAHGYFQPYAAAAQYSKAGLFQDPDKKTPVFVRFSTVQGPRGSNDTVRDVRGFATKFYTDEGNWDL VGNDMPVFFIQDAIKFPDFVHAVKPEPHNEIPQGQSAHDTFWDFVSLMPESAHMVLWTMSDRAFPRHYRNMEGFGVHTFR LVDKQGKARFVKFHWKPLAGTCSLIWDEAQKLWGRDPDFNRRNMWDDIESGDYLEYEFGIQVIEEEDEHKFDFDILDPTK LIPEEQVPVTPIGKMVLDRNPDNFFAETEQVAFNPGNVVPGIDFTNDPLLQGRLFSYLDTQMLRLGGPNFHEIPINQPVC PFHNNQRDSMHRQTINKGQASYEPNSIDDGYPSETPPAPENGGFETVNERVDANKIRARSASFGDHYSQATLFWNSQTDV EKEHIIAAYTFELSKVERPWIRERVIQKILPNIDLELARRVGENHGIETPAEKPAPAEELGNGSQQASEALSLMARLPHD IKYRKVALLVADGVDGDQVEALKAKLEAEGAKGIVIAPSMAPVKATNGQQVVPDAMLNGLPSVTLDAVIVVGGAESAKAL SQSGLGLYYVQEAYKHLKAIAAIGEGRDLLSAAGVPTQEDGIFLGATVDDVFTPFTEAMGQHRVWPRDARANSMPA >Mature_715_residues AKNPHTHSNSDEAHDTAHKTTESSKSDRLEAFRSDAKGHDLRTNQGTRIADNHNSLKAGERGPTLMEDFIFREKLNHFDN ERIPERIVHARGAAAHGYFQPYAAAAQYSKAGLFQDPDKKTPVFVRFSTVQGPRGSNDTVRDVRGFATKFYTDEGNWDLV GNDMPVFFIQDAIKFPDFVHAVKPEPHNEIPQGQSAHDTFWDFVSLMPESAHMVLWTMSDRAFPRHYRNMEGFGVHTFRL VDKQGKARFVKFHWKPLAGTCSLIWDEAQKLWGRDPDFNRRNMWDDIESGDYLEYEFGIQVIEEEDEHKFDFDILDPTKL IPEEQVPVTPIGKMVLDRNPDNFFAETEQVAFNPGNVVPGIDFTNDPLLQGRLFSYLDTQMLRLGGPNFHEIPINQPVCP FHNNQRDSMHRQTINKGQASYEPNSIDDGYPSETPPAPENGGFETVNERVDANKIRARSASFGDHYSQATLFWNSQTDVE KEHIIAAYTFELSKVERPWIRERVIQKILPNIDLELARRVGENHGIETPAEKPAPAEELGNGSQQASEALSLMARLPHDI KYRKVALLVADGVDGDQVEALKAKLEAEGAKGIVIAPSMAPVKATNGQQVVPDAMLNGLPSVTLDAVIVVGGAESAKALS QSGLGLYYVQEAYKHLKAIAAIGEGRDLLSAAGVPTQEDGIFLGATVDDVFTPFTEAMGQHRVWPRDARANSMPA
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family. HPII subfamily [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=413, Percent_Identity=46.4891041162228, Blast_Score=364, Evalue=1e-100, Organism=Escherichia coli, GI48994891, Length=697, Percent_Identity=58.3931133428981, Blast_Score=820, Evalue=0.0, Organism=Caenorhabditis elegans, GI71998444, Length=443, Percent_Identity=43.5665914221219, Blast_Score=362, Evalue=1e-100, Organism=Caenorhabditis elegans, GI25151141, Length=407, Percent_Identity=45.945945945946, Blast_Score=360, Evalue=2e-99, Organism=Caenorhabditis elegans, GI25147792, Length=392, Percent_Identity=46.4285714285714, Blast_Score=355, Evalue=7e-98, Organism=Saccharomyces cerevisiae, GI6320462, Length=379, Percent_Identity=41.4248021108179, Blast_Score=292, Evalue=1e-79, Organism=Saccharomyces cerevisiae, GI6321525, Length=344, Percent_Identity=40.1162790697674, Blast_Score=271, Evalue=3e-73, Organism=Drosophila melanogaster, GI17981717, Length=488, Percent_Identity=40.9836065573771, Blast_Score=353, Evalue=2e-97, Organism=Drosophila melanogaster, GI19920968, Length=489, Percent_Identity=38.241308793456, Blast_Score=342, Evalue=6e-94,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 - InterPro: IPR002818 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel; PF01965 DJ-1_PfpI [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 80023; Mature: 79892
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS00437 CATALASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKNPHTHSNSDEAHDTAHKTTESSKSDRLEAFRSDAKGHDLRTNQGTRIADNHNSLKAG CCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCC ERGPTLMEDFIFREKLNHFDNERIPERIVHARGAAAHGYFQPYAAAAQYSKAGLFQDPDK CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCC KTPVFVRFSTVQGPRGSNDTVRDVRGFATKFYTDEGNWDLVGNDMPVFFIQDAIKFPDFV CCCEEEEEEECCCCCCCCCHHHHHHHHHHHEEECCCCEEEECCCCCEEEEHHHHCCCHHH HAVKPEPHNEIPQGQSAHDTFWDFVSLMPESAHMVLWTMSDRAFPRHYRNMEGFGVHTFR HHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHCCCCCCCEEEEE LVDKQGKARFVKFHWKPLAGTCSLIWDEAQKLWGRDPDFNRRNMWDDIESGDYLEYEFGI EECCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCE QVIEEEDEHKFDFDILDPTKLIPEEQVPVTPIGKMVLDRNPDNFFAETEQVAFNPGNVVP EEEECCCCCCCCEECCCHHHCCCCCCCCCCCCCHHHHCCCCCHHHHCCHHEEECCCCCCC GIDFTNDPLLQGRLFSYLDTQMLRLGGPNFHEIPINQPVCPFHNNQRDSMHRQTINKGQA CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHCCCC SYEPNSIDDGYPSETPPAPENGGFETVNERVDANKIRARSASFGDHYSQATLFWNSQTDV CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHCCCCCCCCCCCEEEEECCCCCC EKEHIIAAYTFELSKVERPWIRERVIQKILPNIDLELARRVGENHGIETPAEKPAPAEEL CHHHEEEEEEEEHHHCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHH GNGSQQASEALSLMARLPHDIKYRKVALLVADGVDGDQVEALKAKLEAEGAKGIVIAPSM CCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEECCCC APVKATNGQQVVPDAMLNGLPSVTLDAVIVVGGAESAKALSQSGLGLYYVQEAYKHLKAI CCEECCCCCEECHHHHHCCCCCCCEEEEEEECCCHHHHHHHHCCCEEHHHHHHHHHHHHH AAIGEGRDLLSAAGVPTQEDGIFLGATVDDVFTPFTEAMGQHRVWPRDARANSMPA HHHCCCHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure AKNPHTHSNSDEAHDTAHKTTESSKSDRLEAFRSDAKGHDLRTNQGTRIADNHNSLKAG CCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCC ERGPTLMEDFIFREKLNHFDNERIPERIVHARGAAAHGYFQPYAAAAQYSKAGLFQDPDK CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCC KTPVFVRFSTVQGPRGSNDTVRDVRGFATKFYTDEGNWDLVGNDMPVFFIQDAIKFPDFV CCCEEEEEEECCCCCCCCCHHHHHHHHHHHEEECCCCEEEECCCCCEEEEHHHHCCCHHH HAVKPEPHNEIPQGQSAHDTFWDFVSLMPESAHMVLWTMSDRAFPRHYRNMEGFGVHTFR HHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHCCCCCCCEEEEE LVDKQGKARFVKFHWKPLAGTCSLIWDEAQKLWGRDPDFNRRNMWDDIESGDYLEYEFGI EECCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCE QVIEEEDEHKFDFDILDPTKLIPEEQVPVTPIGKMVLDRNPDNFFAETEQVAFNPGNVVP EEEECCCCCCCCEECCCHHHCCCCCCCCCCCCCHHHHCCCCCHHHHCCHHEEECCCCCCC GIDFTNDPLLQGRLFSYLDTQMLRLGGPNFHEIPINQPVCPFHNNQRDSMHRQTINKGQA CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHCCCC SYEPNSIDDGYPSETPPAPENGGFETVNERVDANKIRARSASFGDHYSQATLFWNSQTDV CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHCCCCCCCCCCCEEEEECCCCCC EKEHIIAAYTFELSKVERPWIRERVIQKILPNIDLELARRVGENHGIETPAEKPAPAEEL CHHHEEEEEEEEHHHCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHH GNGSQQASEALSLMARLPHDIKYRKVALLVADGVDGDQVEALKAKLEAEGAKGIVIAPSM CCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEECCCC APVKATNGQQVVPDAMLNGLPSVTLDAVIVVGGAESAKALSQSGLGLYYVQEAYKHLKAI CCEECCCCCEECHHHHHCCCCCCCEEEEEEECCCHHHHHHHHCCCEEHHHHHHHHHHHHH AAIGEGRDLLSAAGVPTQEDGIFLGATVDDVFTPFTEAMGQHRVWPRDARANSMPA HHHCCCHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]