| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is 92113221
Identifier: 92113221
GI number: 92113221
Start: 1240411
End: 1241286
Strand: Direct
Name: 92113221
Synonym: Csal_1094
Alternate gene names: NA
Gene position: 1240411-1241286 (Clockwise)
Preceding gene: 92113220
Following gene: 92113226
Centisome position: 33.56
GC content: 57.42
Gene sequence:
>876_bases ATGAGACGGATTGTCTTGGCGACGGACCTATCTGCTCCGGCTCGTCAGGCAGCTGAACGTGCTGCACAACTGAGTCATTC GTTGGCCGTGCCCATGGAGCTGCTGCATATCGTCAATCTTGAGCTCATGCCGAGGCTTCAGAACGCTGTTCCTGCGGCGG TGGCTGCGTCGTTGCCCCTGCGTGTCTTGAAGGCGGCGCAAGAGACGTTGGAAACATGGGCTGCCGACTTGCAGTCACGC TATGCCATAACCCCAACGGCTCGCGTCATCGACGGTGAGCTGTTGCATGAACTACTCGACGCGGTTGGCGACGAGGATGC CGTGGACAGCTTGCTGGTTTGTGGTGCTACCGGGGAAAGTATCGTACGCCATTTTTTCCTGGGCTCGACGGCGGAACGTT TATCAGGCAGGACGACCTGTCCCATGCTCGTCGTTAAAAATCCGGTGACGGGGCCGTATCGACACGTACTCGTTCCCGTG GATTTTTCTCCCTCTTCGTTAGCGGCGATCCAGCATGTTCAGGCGCTGGCACCTCAGGCAGGGCTGACCTTGTTGCATGC GGTGGAGCTTCCATTCCAGGGGCTACTGAGTCTCGCCGGCATCGGTCGTGAGGACATAGATGGCTATCGCGCCACGGTCG AGCAGGAGGCAAACGAGAAGCTGCATGCATTATGTCAACAAGCAGGACTTCCCCCCTCGACCCTGCTTAGGGTGGTTCAG GGCGAGCCAGTAGCCTCCATCCTGGCTCAGGAACAAGGGTGCGATTTGATCGTCATGGGCAAGCATGGCGAAAGCCGGTT CCAAAAGCTATTTATTGGCAAAAACACGAAGAAAGTTCTCGCTGAGTCGCGGCACGATGTGCTCGTGTCAGTATGA
Upstream 100 bases:
>100_bases GGCTGATCATGGGAGCCGGCATGGTCATCATGGTCGTGCTGGAAAGCGAGAAAATATTGATGCGTCGAGTGGGGAAACGC TATCACCGAGGAGATCGACC
Downstream 100 bases:
>100_bases AAGGGGAGGTTGCAAAATAGTTGCCCTGACGCTGATGAGTGAGCTTTCCATCATGGCGTCAGGTGAATGTGACGATGCGT TCCACGGCACGCTCTGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: UspA Domain Protein; UspA Domain-Containing Protein; Universal Stress Family Protein; Universal Stress Protein UspA; UspA Protein; Universal Stress Protein Usp; Universal Stress Protein Family; Universal Stress Family
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MRRIVLATDLSAPARQAAERAAQLSHSLAVPMELLHIVNLELMPRLQNAVPAAVAASLPLRVLKAAQETLETWAADLQSR YAITPTARVIDGELLHELLDAVGDEDAVDSLLVCGATGESIVRHFFLGSTAERLSGRTTCPMLVVKNPVTGPYRHVLVPV DFSPSSLAAIQHVQALAPQAGLTLLHAVELPFQGLLSLAGIGREDIDGYRATVEQEANEKLHALCQQAGLPPSTLLRVVQ GEPVASILAQEQGCDLIVMGKHGESRFQKLFIGKNTKKVLAESRHDVLVSV
Sequences:
>Translated_291_residues MRRIVLATDLSAPARQAAERAAQLSHSLAVPMELLHIVNLELMPRLQNAVPAAVAASLPLRVLKAAQETLETWAADLQSR YAITPTARVIDGELLHELLDAVGDEDAVDSLLVCGATGESIVRHFFLGSTAERLSGRTTCPMLVVKNPVTGPYRHVLVPV DFSPSSLAAIQHVQALAPQAGLTLLHAVELPFQGLLSLAGIGREDIDGYRATVEQEANEKLHALCQQAGLPPSTLLRVVQ GEPVASILAQEQGCDLIVMGKHGESRFQKLFIGKNTKKVLAESRHDVLVSV >Mature_291_residues MRRIVLATDLSAPARQAAERAAQLSHSLAVPMELLHIVNLELMPRLQNAVPAAVAASLPLRVLKAAQETLETWAADLQSR YAITPTARVIDGELLHELLDAVGDEDAVDSLLVCGATGESIVRHFFLGSTAERLSGRTTCPMLVVKNPVTGPYRHVLVPV DFSPSSLAAIQHVQALAPQAGLTLLHAVELPFQGLLSLAGIGREDIDGYRATVEQEANEKLHALCQQAGLPPSTLLRVVQ GEPVASILAQEQGCDLIVMGKHGESRFQKLFIGKNTKKVLAESRHDVLVSV
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31233; Mature: 31233
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRIVLATDLSAPARQAAERAAQLSHSLAVPMELLHIVNLELMPRLQNAVPAAVAASLPL CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVLKAAQETLETWAADLQSRYAITPTARVIDGELLHELLDAVGDEDAVDSLLVCGATGES HHHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHCCCHHHHHHEEEECCCHHH IVRHFFLGSTAERLSGRTTCPMLVVKNPVTGPYRHVLVPVDFSPSSLAAIQHVQALAPQA HHHHHHHCCHHHHHCCCCCCCEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCHH GLTLLHAVELPFQGLLSLAGIGREDIDGYRATVEQEANEKLHALCQQAGLPPSTLLRVVQ HHHHHHHHHCCHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC GEPVASILAQEQGCDLIVMGKHGESRFQKLFIGKNTKKVLAESRHDVLVSV CCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCHHHHHHCCCCCEEEEC >Mature Secondary Structure MRRIVLATDLSAPARQAAERAAQLSHSLAVPMELLHIVNLELMPRLQNAVPAAVAASLPL CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVLKAAQETLETWAADLQSRYAITPTARVIDGELLHELLDAVGDEDAVDSLLVCGATGES HHHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHCCCHHHHHHEEEECCCHHH IVRHFFLGSTAERLSGRTTCPMLVVKNPVTGPYRHVLVPVDFSPSSLAAIQHVQALAPQA HHHHHHHCCHHHHHCCCCCCCEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCHH GLTLLHAVELPFQGLLSLAGIGREDIDGYRATVEQEANEKLHALCQQAGLPPSTLLRVVQ HHHHHHHHHCCHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC GEPVASILAQEQGCDLIVMGKHGESRFQKLFIGKNTKKVLAESRHDVLVSV CCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCHHHHHHCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA