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The map label for this gene is yiaN [C]

Identifier: 92113202

GI number: 92113202

Start: 1213144

End: 1214424

Strand: Direct

Name: yiaN [C]

Synonym: Csal_1074

Alternate gene names: 92113202

Gene position: 1213144-1214424 (Clockwise)

Preceding gene: 92113201

Following gene: 92113203

Centisome position: 32.82

GC content: 60.11

Gene sequence:

>1281_bases
ATGATGGTCGTCGTCTTCCTCGCCGTGCTGTTCTCGTTGATGTTGATCGGCATGCCGATCGCCTTCGCCATGCTCAGCTC
CGCCGTGGTGATGATGTGGACCCAGGACATGTTCAATGTCACCACACTGGCCGAGCACTTCATCACCGGGGCCAACAGCT
TTGCCTTGATGGCCATTCCCTTTTTCATCCTGACCGGCGAGATCATGAATGCCGGGGGCGTTTCCAAGCGCATCGTCGAC
TTTGCCTCGTCACTGGTGGGCCATGTGAAAGGCGGCCTGGGCTATGTCGCCATCGTGGCCGGGGTGATCTTTGCCGGGTT
ATCCGGCTCCGCCGTTGCCGATACCGCGGCACTGGGCTCGATCCTCATCCCCATGATGGTGGCGCAAGGCTACGAGAAGA
AGCGCTCGACCGCGCTGGTGGCATCCGTCGGCATCGTGGGCACCGTGATTCCCCCGAGCATTCCCTTGATTCTTTACGGG
GTCGTGGGCGGCGTCTCGATTACCGGGTTGTTCATGGGCGGCATCGTGCCCGGGGTCATCATGGCGATCGGCATGACGTT
CACCTGGTGGCTGGTCGCGCGCAAAGCCGATACCAAGCGGCTCGAGCGTGCCAACTGGCAGGCGCGGCTTCACAGCTTCA
AGCGTGCCTTCTGGGCCTTGCTGCTGCCGCTGATCATCATCGTCGGGCTGCGTGGCGGCGTGTTCACGCCGACAGAAGCG
GGCGTCGTCGCTGCGGTATACGCGCTGTTGATCAGCCTCTGCTATCGAGAAATTCGTCTGACGCAGCTGTTCGATGTGCT
CACCAACACCGCCAAGACCACGGCCATCGTGATGCTGATCGCCTCGGCGGCCATTGTCACGGCGTATGCGATCACGGTAG
CGCAGGTTCCCGCCCAGATCGCGGCAGGGCTCACGAGCATTACCGACAGCCCGACCCTGATGCTCTTGATCATCATGGTC
ATACTGCTGCTGTTCGGCTGCGTGATGGACATGACACCCGCGGTGCTGATTTTCGCGCCCGTGCTGATCCCGGTGGTCGA
GCAGCTCGGTATCGATCCCATCTACTTCGGTGTGGTGATGATCATCAACCTCTCCATCGGCTTGATCACACCGCCGGTGG
GCACGGTGCTCTATGTAGGGTGCAGCATCAGCCGAATCAGCATCATCGACATTTCGCGCGGCATATGGCCGATGCTGTTG
ATGTACGTGGCGATCCTGTTTGCACTGATTCTCTTCCCCGAGATCGTGACCTATCCCTTAAGTATTCTGCACAACGGTTG
A

Upstream 100 bases:

>100_bases
TTCTGATGTCCGCGGTGATGGCGTACCAGGCGTTGAGCTTCGTCCTGACCGGCCGTAATGGCCCCACATGGGCCTACGAT
CGTGACCAGGAGTCGGTGTC

Downstream 100 bases:

>100_bases
ATGATGGAGCTGACATGAAAAGAAGCATGCCGCGCAGACGGCGCTACGATCAGGCACTGAGCATCGCGGAGCTTGCCGAG
ATCGCGCGCCGACGGCTTCC

Product: TRAP dicarboxylate transporter subunit DctM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MMVVVFLAVLFSLMLIGMPIAFAMLSSAVVMMWTQDMFNVTTLAEHFITGANSFALMAIPFFILTGEIMNAGGVSKRIVD
FASSLVGHVKGGLGYVAIVAGVIFAGLSGSAVADTAALGSILIPMMVAQGYEKKRSTALVASVGIVGTVIPPSIPLILYG
VVGGVSITGLFMGGIVPGVIMAIGMTFTWWLVARKADTKRLERANWQARLHSFKRAFWALLLPLIIIVGLRGGVFTPTEA
GVVAAVYALLISLCYREIRLTQLFDVLTNTAKTTAIVMLIASAAIVTAYAITVAQVPAQIAAGLTSITDSPTLMLLIIMV
ILLLFGCVMDMTPAVLIFAPVLIPVVEQLGIDPIYFGVVMIINLSIGLITPPVGTVLYVGCSISRISIIDISRGIWPMLL
MYVAILFALILFPEIVTYPLSILHNG

Sequences:

>Translated_426_residues
MMVVVFLAVLFSLMLIGMPIAFAMLSSAVVMMWTQDMFNVTTLAEHFITGANSFALMAIPFFILTGEIMNAGGVSKRIVD
FASSLVGHVKGGLGYVAIVAGVIFAGLSGSAVADTAALGSILIPMMVAQGYEKKRSTALVASVGIVGTVIPPSIPLILYG
VVGGVSITGLFMGGIVPGVIMAIGMTFTWWLVARKADTKRLERANWQARLHSFKRAFWALLLPLIIIVGLRGGVFTPTEA
GVVAAVYALLISLCYREIRLTQLFDVLTNTAKTTAIVMLIASAAIVTAYAITVAQVPAQIAAGLTSITDSPTLMLLIIMV
ILLLFGCVMDMTPAVLIFAPVLIPVVEQLGIDPIYFGVVMIINLSIGLITPPVGTVLYVGCSISRISIIDISRGIWPMLL
MYVAILFALILFPEIVTYPLSILHNG
>Mature_426_residues
MMVVVFLAVLFSLMLIGMPIAFAMLSSAVVMMWTQDMFNVTTLAEHFITGANSFALMAIPFFILTGEIMNAGGVSKRIVD
FASSLVGHVKGGLGYVAIVAGVIFAGLSGSAVADTAALGSILIPMMVAQGYEKKRSTALVASVGIVGTVIPPSIPLILYG
VVGGVSITGLFMGGIVPGVIMAIGMTFTWWLVARKADTKRLERANWQARLHSFKRAFWALLLPLIIIVGLRGGVFTPTEA
GVVAAVYALLISLCYREIRLTQLFDVLTNTAKTTAIVMLIASAAIVTAYAITVAQVPAQIAAGLTSITDSPTLMLLIIMV
ILLLFGCVMDMTPAVLIFAPVLIPVVEQLGIDPIYFGVVMIINLSIGLITPPVGTVLYVGCSISRISIIDISRGIWPMLL
MYVAILFALILFPEIVTYPLSILHNG

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=425, Percent_Identity=48.7058823529412, Blast_Score=362, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 45242; Mature: 45242

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCC
>Mature Secondary Structure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HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]