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The map label for this gene is fadF [H]

Identifier: 92113119

GI number: 92113119

Start: 1112659

End: 1114671

Strand: Direct

Name: fadF [H]

Synonym: Csal_0991

Alternate gene names: 92113119

Gene position: 1112659-1114671 (Clockwise)

Preceding gene: 92113118

Following gene: 92113120

Centisome position: 30.1

GC content: 68.55

Gene sequence:

>2013_bases
ATGCTCGATATCCTCCTGCCGATCCTGATCTTTTCCGCCCTGGCGCTGGCGGCGATCGGCGCCGTGCGGCGCATTCGCCT
GTGGCGTCAGGGGCGGCCATCGCCGGTGCCCGTGCTCCGCGGTCTGGCGGCGGTACCGCGTCGGTATCTGGTCGACCTGC
ACCACGTGGTGGCGCGCGACAAGGTGATGTCCAACACTCACGTCGCCACCGCCGGCGGCTTCGTCGCCGCCATGGGGCTG
GCGATCGTCGTCCATGGCCTGGGCCTTGCCGAGGGCGTCCTGGGCTGGTTGCTGCTGGCGGCGAGCGCGACGATGTTCGC
AGGCAGCCTGTTCGTCGCCCGGCGTCGGCGGAATCCTCCGGCGCGCCTGTCGAAGGGGCCCTGGATGCGTTTGCCCAAGA
GTCTGATGGCGTTCTCGCTGGGCATCTTTGTGGTTACCCTGCCGGCGGTGGGTGTGCTGCCCGCCGACGCCGGTGGCTGG
CTGGTCGCGCTGGTGCTGGCTGCCGTGGTGGCCTGGGGCCTGGCCGAGCTGGTGTTCGGCATGACATGGGGCGGGCCGAT
GAAGCACGCCTTTGCCGGCGCCCTGCACCTGGCCTTCCATCGCCGGCCGGCGCGCTTTTCGGACAAGCGCGGGGGCGAGG
GCCGCTCGACCGGGCTCAAGGCGCTGGACCTGGACGACGCCGACGCGCCGCTGGGCGTCGAGAAGCCCGCCGACTTCACC
TGGAACCAGTTGCTGGGCTTCGACGCCTGCGTGCAGTGCGGTCGCTGCGAGGCGGTGTGTCCGGCCTTCGCCGCCGGCCA
GCCGCTCAATCCCAAGAAACTGGTGCAGGACATGGTGGTGGGCATGGTCGGCGGCAGTGACGCCCGCTACGCCGGCAGTC
CATACCCGGGCAAGCCGGTCGGCGAGCACGCCGGCGACCCCCACGGGCCGATCGTCGCCCGCGAGGGCACCGCCCTGGTC
GACGCCGAGACGCTGTGGTCGTGCACCACCTGTCGCGCCTGCGTCGAGGAGTGCCCGATGATGATCGAGCATGTCGATGC
CATCGTCGACATGCGCCGCCACCTGACCCTGGAAGAAGGCGCGACGCCCGGCAAGGGCGCCGAGGTCATCGACAACCTGA
TCGCCACCGACAACCCGGGCGGTTTCGATCCCGGGGGACGACTCAACTGGGCGGCGGATCTCGACCTGCCGTTGATGGCC
GACGTGGAGCGCGCCGAGGTGCTGCTGTGGCTGGGCGATGGCGTCTTCGACATGCGCAATCAGCGCACGCTGCGTGCCTT
GATCAAGGTGCTGCGTGCTGCCGACGTCGATTTCGCGGTGCTCGGCAATGAAGAGCGCGACAGCGGAGACGTGGCACGCC
GTCTGGGAGACGAGGCCACCTTTCAGTCGCTGGCGCGGCGCAATATCGACACGCTGTCGCGATATCGCTTCGAGAGTATC
GTGACCTGCGATCCGCACAGCTTTCACGTGCTCAAGAACGAATACGGCGCCCTCTATCCGCAAGGGCAAGACGCCGACTA
CCCGGTATGGCATCACAGCACTTTCATCAATCAGTTGATCGAAAGCGGGCGGTTGCCGTTGGCGCCGGGACAGGCGCAGC
GCGTGACCTACCACGACCCCTGCTATCTGGGCCGCTACAACGGTGAATACGAAGCACCGCGCGCGGTGCTGCGCGCCCTG
GGCATGGAGCTGGTCGAGATGCAGCGTTCGGGATACCGCTCGCGTTGCTGCGGCGGCGGCGGTGGCGCGCCGATCACCGA
CGTTCCCGGCAAGCAGCGTATCCCCGACATGCGCATGGGCGACGTGCGCGAGACTCAGGCCGAGCAGGTCGTCGTGGGAT
GTCCGCAATGCACGGCCATGCTCGAAGGCGTTGTCCCACCGGCGGGTAACGAGGCGACCGCCGTCAAGGACATCGCCGAG
ATGGTTGCCGCCGCGCTGGATAACACGCCACCGGCGACACCCGCGTCGCATGACACTGCGGCCTCGCAGGCCACGGAGGA
GGTGCTGTCATGA

Upstream 100 bases:

>100_bases
CGTCGACCTTCGCCTAACCTGGCCGTCGCTCATGACGCTTTCCCACCCAGGAAGCACGAGCCGCACCGATAACAATTCCA
TGTTCGTGAGGTGAGCCGAC

Downstream 100 bases:

>100_bases
GTCAATTACCGCGTCGCGATCCGCGCCAGGAATGGATCGCCCGCAATCGCCTTCACCCTCGCCACGAGGAGGTGCTCGCC
GCGCTGGGCCAGGGGGCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 670; Mature: 670

Protein sequence:

>670_residues
MLDILLPILIFSALALAAIGAVRRIRLWRQGRPSPVPVLRGLAAVPRRYLVDLHHVVARDKVMSNTHVATAGGFVAAMGL
AIVVHGLGLAEGVLGWLLLAASATMFAGSLFVARRRRNPPARLSKGPWMRLPKSLMAFSLGIFVVTLPAVGVLPADAGGW
LVALVLAAVVAWGLAELVFGMTWGGPMKHAFAGALHLAFHRRPARFSDKRGGEGRSTGLKALDLDDADAPLGVEKPADFT
WNQLLGFDACVQCGRCEAVCPAFAAGQPLNPKKLVQDMVVGMVGGSDARYAGSPYPGKPVGEHAGDPHGPIVAREGTALV
DAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEEGATPGKGAEVIDNLIATDNPGGFDPGGRLNWAADLDLPLMA
DVERAEVLLWLGDGVFDMRNQRTLRALIKVLRAADVDFAVLGNEERDSGDVARRLGDEATFQSLARRNIDTLSRYRFESI
VTCDPHSFHVLKNEYGALYPQGQDADYPVWHHSTFINQLIESGRLPLAPGQAQRVTYHDPCYLGRYNGEYEAPRAVLRAL
GMELVEMQRSGYRSRCCGGGGGAPITDVPGKQRIPDMRMGDVRETQAEQVVVGCPQCTAMLEGVVPPAGNEATAVKDIAE
MVAAALDNTPPATPASHDTAASQATEEVLS

Sequences:

>Translated_670_residues
MLDILLPILIFSALALAAIGAVRRIRLWRQGRPSPVPVLRGLAAVPRRYLVDLHHVVARDKVMSNTHVATAGGFVAAMGL
AIVVHGLGLAEGVLGWLLLAASATMFAGSLFVARRRRNPPARLSKGPWMRLPKSLMAFSLGIFVVTLPAVGVLPADAGGW
LVALVLAAVVAWGLAELVFGMTWGGPMKHAFAGALHLAFHRRPARFSDKRGGEGRSTGLKALDLDDADAPLGVEKPADFT
WNQLLGFDACVQCGRCEAVCPAFAAGQPLNPKKLVQDMVVGMVGGSDARYAGSPYPGKPVGEHAGDPHGPIVAREGTALV
DAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEEGATPGKGAEVIDNLIATDNPGGFDPGGRLNWAADLDLPLMA
DVERAEVLLWLGDGVFDMRNQRTLRALIKVLRAADVDFAVLGNEERDSGDVARRLGDEATFQSLARRNIDTLSRYRFESI
VTCDPHSFHVLKNEYGALYPQGQDADYPVWHHSTFINQLIESGRLPLAPGQAQRVTYHDPCYLGRYNGEYEAPRAVLRAL
GMELVEMQRSGYRSRCCGGGGGAPITDVPGKQRIPDMRMGDVRETQAEQVVVGCPQCTAMLEGVVPPAGNEATAVKDIAE
MVAAALDNTPPATPASHDTAASQATEEVLS
>Mature_670_residues
MLDILLPILIFSALALAAIGAVRRIRLWRQGRPSPVPVLRGLAAVPRRYLVDLHHVVARDKVMSNTHVATAGGFVAAMGL
AIVVHGLGLAEGVLGWLLLAASATMFAGSLFVARRRRNPPARLSKGPWMRLPKSLMAFSLGIFVVTLPAVGVLPADAGGW
LVALVLAAVVAWGLAELVFGMTWGGPMKHAFAGALHLAFHRRPARFSDKRGGEGRSTGLKALDLDDADAPLGVEKPADFT
WNQLLGFDACVQCGRCEAVCPAFAAGQPLNPKKLVQDMVVGMVGGSDARYAGSPYPGKPVGEHAGDPHGPIVAREGTALV
DAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEEGATPGKGAEVIDNLIATDNPGGFDPGGRLNWAADLDLPLMA
DVERAEVLLWLGDGVFDMRNQRTLRALIKVLRAADVDFAVLGNEERDSGDVARRLGDEATFQSLARRNIDTLSRYRFESI
VTCDPHSFHVLKNEYGALYPQGQDADYPVWHHSTFINQLIESGRLPLAPGQAQRVTYHDPCYLGRYNGEYEAPRAVLRAL
GMELVEMQRSGYRSRCCGGGGGAPITDVPGKQRIPDMRMGDVRETQAEQVVVGCPQCTAMLEGVVPPAGNEATAVKDIAE
MVAAALDNTPPATPASHDTAASQATEEVLS

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 71818; Mature: 71818

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHC
>Mature Secondary Structure
MLDILLPILIFSALALAAIGAVRRIRLWRQGRPSPVPVLRGLAAVPRRYLVDLHHVVARD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KVMSNTHVATAGGFVAAMGLAIVVHGLGLAEGVLGWLLLAASATMFAGSLFVARRRRNPP
HHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ARLSKGPWMRLPKSLMAFSLGIFVVTLPAVGVLPADAGGWLVALVLAAVVAWGLAELVFG
CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
MTWGGPMKHAFAGALHLAFHRRPARFSDKRGGEGRSTGLKALDLDDADAPLGVEKPADFT
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC
WNQLLGFDACVQCGRCEAVCPAFAAGQPLNPKKLVQDMVVGMVGGSDARYAGSPYPGKPV
HHHHHCCHHHHHCCCCCHHCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
GEHAGDPHGPIVAREGTALVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEEG
CCCCCCCCCCEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCC
ATPGKGAEVIDNLIATDNPGGFDPGGRLNWAADLDLPLMADVERAEVLLWLGDGVFDMRN
CCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHCCCCHHEEEEEECCCHHHHCC
QRTLRALIKVLRAADVDFAVLGNEERDSGDVARRLGDEATFQSLARRNIDTLSRYRFESI
HHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHE
VTCDPHSFHVLKNEYGALYPQGQDADYPVWHHSTFINQLIESGRLPLAPGQAQRVTYHDP
EECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCC
CYLGRYNGEYEAPRAVLRALGMELVEMQRSGYRSRCCGGGGGAPITDVPGKQRIPDMRMG
EEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC
DVRETQAEQVVVGCPQCTAMLEGVVPPAGNEATAVKDIAEMVAAALDNTPPATPASHDTA
CCHHHHHCEEEEECHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
ASQATEEVLS
HHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]