| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is 92113106
Identifier: 92113106
GI number: 92113106
Start: 1096024
End: 1097931
Strand: Direct
Name: 92113106
Synonym: Csal_0978
Alternate gene names: NA
Gene position: 1096024-1097931 (Clockwise)
Preceding gene: 92113104
Following gene: 92113107
Centisome position: 29.65
GC content: 62.32
Gene sequence:
>1908_bases ATGCAAGCAGAGTTGCTGGAAATTCGTCAGCACATGGGACAGTTCCCGCCCTTCGACCAACTGTCCGATGACCTGCTCGA CGAGCTGGCAGGACAGGTCGAGGTCGGGTACTTCCAGGCTGACACCGATATCTATCGCCATGACGATGCCGTCGAACACC TCCACTATATCCGTAGCGGGGCCATCGACCTGTATCGGCGCAACGGCGACCTCTACAACCGCTTGAGCGAAGGCGATATC TTCGGTCAGTTCGACCTGCTGCGCGATCAGCGCGTGCGTTTTCCGGCGCGTGCCATCGAAGACACGCTCATCTACTTCAT CCCCCATGCCATGTTCCGTCGGCTGTGTGAACTGGACGAAAACTTCGCCGATTTCGTCGAGGTGGAACGTCCGCGCCTGG AGGCGACCGTCGACCAGCAGCGCAAGGGGCACGAGATGCTGGTCACCAAGGTGCGCAAGCTGGCCTCACGTGCTCCGGTG ATGGTGGAGAGCGATGCGACGGTACAGGAGGCGGCACAGCACATGGGCGAGCACAACGCCTCGTCAGTGCTGGTGCTGGC AGCTCCGCAAGCGGATGACGATTCGCACGCCTTCACCCTCGATGATGGCCGCTCACGCCGCATGGTGGGTATTCTCACCG ACCACGATTTGCGCAACCGGGTGCTTGCCGAAGGACTGCCGGCGAGCACGCAGGTGGGGCAACTGATCGACGATCGGCCG ATCACCATCCAGTCCGACGAGTCGGTCTACGAGGCGATGCTGCGCATGCTGCGCAACAACATCCACCACTTGCCGGTACT CTATCGCCGGCGACCGATCGGCGTGCTGCATCTGTCCGATATCGTGCGCCACGAAACCAACAGCAGCCTCTATCTCGTGG ATAACATCTTCCGCCAGCCCAACGTCGAGGCCCTGGCGGCCTTGAAGGGGGACGTGCGGGCCGCATTCGTGCGCATGGTC AACGAGGGCGACAACTCGCAGATGGTGGGCAGCTCGTTGTCGAGCATCGGGCGCAGCTTCACGCGGCGTCTGCTGGAGTT GGCCGAGGAAGAGCTGGGGCCGCCTCCGGTGCCGTATTGTTTCATGGCGCTGGGGTCGATGGCGCGCAACGAGCAATCCA TCGTCACCGACCAGGACAACGCCCTGGTACTCGATGACCGCTTCGACCCGGAGCAGCACGATGCGTACTTCCTGACGCTG GCCCAGCGTGTCAGCGACGGCCTGGCGGCCTGCGGATACAGCTACTGCAAGGGCGACGTCATGGCCACCAACTCGCGCTG GCGGCAACCGCTGCGCGTCTGGCAGCAGTACTTCAGCGACTGGATCGACAACCCCAACGCCGAGCGGCTGCTGCACAGCT CGATTTTCTTCGACCTGGACAGCGTGCACGGCGAAGAGGCTTTCGCCGAGCGCTTGCAGGACCTGGTTGCCGAGCGTGCC TCCCAGCGCCCGCGCTTTCTGGCCGCGATGGCCCGCAATGCCTTGAATCGTACGCCGCCGCTGGGGTTTTTCCGCACCTT CGTGATGGAAAAGGACGGCAAGCAGAACAATACGATCAACTTGAAACGGCGCGGGACGGCACCGCTGGTCGACCTGATTC GCGTACACGCGCTGGCCTGCGGATCTCGCGCACAGAACTCGTTCGAGCGACTCGAGGACATCGCCAAGACACGTCTGCTG GCCGGTCACTCCGGCGAGCGGTTGCGCTATGCGCTGGAGTTCATTGCCATGGTGCGGATTCGCCACCAGGTCATCGATAT CCAGGAAGAACGCGAGCCGGACAATGACATCGAGCCCGAAAACGTCTCGGACAGCGAGCGACACAACCTCAAGGATGCCT TTCAGGTCCTCAGCAACGCGCAGAAGTTCCTCAAGTTCCGTTATCCCATGCCCTCGCAGAAGCGCTGA
Upstream 100 bases:
>100_bases TTTGGAAACGCTGTTTCTTATCCGCGCGTGGCGCTTTACAGAACACACGGCGGCTTTCAGACTACCGGCATTGCCCTTGC CAGTGCCGGAGACCAGTCGC
Downstream 100 bases:
>100_bases TCGCTGAATGAAAAGATCGTCCTCACGCCATTCGAAAACGCCTGCCACCTGGGCGGACTATTTCACCGCACGTCGCGAGC AGACACGCGTGCCGGCACTC
Product: cyclic nucleotide-binding domain-containing protein
Products: NA
Alternate protein names: Signal-Transduction Protein; Nucleotidyltransferase; Signal Transduction Protein; Signal Transduction Protein With CBS Domains; Signal-Transduction Protein With CBS Domains; Nucleotidyltransferase Family; CBS Domain Protein; Signal Protein; Inosine-5-Monophosphate Dehydrogenase; Nucleotidyltransferase Domain Family Protein; DNA Polymerase III Subunit Epsilon; CBS Signal-Transduction Protein; Cyclic-Nucleotide Signal Transduction Protein; Multidomain-Containing Protein; Cyclic Nucleotide-Regulated Nucleotidyltransferase; Methyl-Accepting Chemotaxis Protein A; Nucleotidyltransferases
Number of amino acids: Translated: 635; Mature: 635
Protein sequence:
>635_residues MQAELLEIRQHMGQFPPFDQLSDDLLDELAGQVEVGYFQADTDIYRHDDAVEHLHYIRSGAIDLYRRNGDLYNRLSEGDI FGQFDLLRDQRVRFPARAIEDTLIYFIPHAMFRRLCELDENFADFVEVERPRLEATVDQQRKGHEMLVTKVRKLASRAPV MVESDATVQEAAQHMGEHNASSVLVLAAPQADDDSHAFTLDDGRSRRMVGILTDHDLRNRVLAEGLPASTQVGQLIDDRP ITIQSDESVYEAMLRMLRNNIHHLPVLYRRRPIGVLHLSDIVRHETNSSLYLVDNIFRQPNVEALAALKGDVRAAFVRMV NEGDNSQMVGSSLSSIGRSFTRRLLELAEEELGPPPVPYCFMALGSMARNEQSIVTDQDNALVLDDRFDPEQHDAYFLTL AQRVSDGLAACGYSYCKGDVMATNSRWRQPLRVWQQYFSDWIDNPNAERLLHSSIFFDLDSVHGEEAFAERLQDLVAERA SQRPRFLAAMARNALNRTPPLGFFRTFVMEKDGKQNNTINLKRRGTAPLVDLIRVHALACGSRAQNSFERLEDIAKTRLL AGHSGERLRYALEFIAMVRIRHQVIDIQEEREPDNDIEPENVSDSERHNLKDAFQVLSNAQKFLKFRYPMPSQKR
Sequences:
>Translated_635_residues MQAELLEIRQHMGQFPPFDQLSDDLLDELAGQVEVGYFQADTDIYRHDDAVEHLHYIRSGAIDLYRRNGDLYNRLSEGDI FGQFDLLRDQRVRFPARAIEDTLIYFIPHAMFRRLCELDENFADFVEVERPRLEATVDQQRKGHEMLVTKVRKLASRAPV MVESDATVQEAAQHMGEHNASSVLVLAAPQADDDSHAFTLDDGRSRRMVGILTDHDLRNRVLAEGLPASTQVGQLIDDRP ITIQSDESVYEAMLRMLRNNIHHLPVLYRRRPIGVLHLSDIVRHETNSSLYLVDNIFRQPNVEALAALKGDVRAAFVRMV NEGDNSQMVGSSLSSIGRSFTRRLLELAEEELGPPPVPYCFMALGSMARNEQSIVTDQDNALVLDDRFDPEQHDAYFLTL AQRVSDGLAACGYSYCKGDVMATNSRWRQPLRVWQQYFSDWIDNPNAERLLHSSIFFDLDSVHGEEAFAERLQDLVAERA SQRPRFLAAMARNALNRTPPLGFFRTFVMEKDGKQNNTINLKRRGTAPLVDLIRVHALACGSRAQNSFERLEDIAKTRLL AGHSGERLRYALEFIAMVRIRHQVIDIQEEREPDNDIEPENVSDSERHNLKDAFQVLSNAQKFLKFRYPMPSQKR >Mature_635_residues MQAELLEIRQHMGQFPPFDQLSDDLLDELAGQVEVGYFQADTDIYRHDDAVEHLHYIRSGAIDLYRRNGDLYNRLSEGDI FGQFDLLRDQRVRFPARAIEDTLIYFIPHAMFRRLCELDENFADFVEVERPRLEATVDQQRKGHEMLVTKVRKLASRAPV MVESDATVQEAAQHMGEHNASSVLVLAAPQADDDSHAFTLDDGRSRRMVGILTDHDLRNRVLAEGLPASTQVGQLIDDRP ITIQSDESVYEAMLRMLRNNIHHLPVLYRRRPIGVLHLSDIVRHETNSSLYLVDNIFRQPNVEALAALKGDVRAAFVRMV NEGDNSQMVGSSLSSIGRSFTRRLLELAEEELGPPPVPYCFMALGSMARNEQSIVTDQDNALVLDDRFDPEQHDAYFLTL AQRVSDGLAACGYSYCKGDVMATNSRWRQPLRVWQQYFSDWIDNPNAERLLHSSIFFDLDSVHGEEAFAERLQDLVAERA SQRPRFLAAMARNALNRTPPLGFFRTFVMEKDGKQNNTINLKRRGTAPLVDLIRVHALACGSRAQNSFERLEDIAKTRLL AGHSGERLRYALEFIAMVRIRHQVIDIQEEREPDNDIEPENVSDSERHNLKDAFQVLSNAQKFLKFRYPMPSQKR
Specific function: Unknown
COG id: COG2905
COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72656; Mature: 72656
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAELLEIRQHMGQFPPFDQLSDDLLDELAGQVEVGYFQADTDIYRHDDAVEHLHYIRSG CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCHHHCHHHHHHHHHHHHC AIDLYRRNGDLYNRLSEGDIFGQFDLLRDQRVRFPARAIEDTLIYFIPHAMFRRLCELDE CHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC NFADFVEVERPRLEATVDQQRKGHEMLVTKVRKLASRAPVMVESDATVQEAAQHMGEHNA HHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCC SSVLVLAAPQADDDSHAFTLDDGRSRRMVGILTDHDLRNRVLAEGLPASTQVGQLIDDRP CCEEEEECCCCCCCCCEEEECCCCCCEEEEEECCCHHHHHHHHCCCCCCHHHHHHHCCCC ITIQSDESVYEAMLRMLRNNIHHLPVLYRRRPIGVLHLSDIVRHETNSSLYLVDNIFRQP CEEECCHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEHHHHHHHHCCCCCEEEHHHHHCCC NVEALAALKGDVRAAFVRMVNEGDNSQMVGSSLSSIGRSFTRRLLELAEEELGPPPVPYC CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH FMALGSMARNEQSIVTDQDNALVLDDRFDPEQHDAYFLTLAQRVSDGLAACGYSYCKGDV HHHHHHHHCCCCCCEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCCE MATNSRWRQPLRVWQQYFSDWIDNPNAERLLHSSIFFDLDSVHGEEAFAERLQDLVAERA EECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH SQRPRFLAAMARNALNRTPPLGFFRTFVMEKDGKQNNTINLKRRGTAPLVDLIRVHALAC HCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHH GSRAQNSFERLEDIAKTRLLAGHSGERLRYALEFIAMVRIRHQVIDIQEEREPDNDIEPE CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCC NVSDSERHNLKDAFQVLSNAQKFLKFRYPMPSQKR CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MQAELLEIRQHMGQFPPFDQLSDDLLDELAGQVEVGYFQADTDIYRHDDAVEHLHYIRSG CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCHHHCHHHHHHHHHHHHC AIDLYRRNGDLYNRLSEGDIFGQFDLLRDQRVRFPARAIEDTLIYFIPHAMFRRLCELDE CHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC NFADFVEVERPRLEATVDQQRKGHEMLVTKVRKLASRAPVMVESDATVQEAAQHMGEHNA HHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCC SSVLVLAAPQADDDSHAFTLDDGRSRRMVGILTDHDLRNRVLAEGLPASTQVGQLIDDRP CCEEEEECCCCCCCCCEEEECCCCCCEEEEEECCCHHHHHHHHCCCCCCHHHHHHHCCCC ITIQSDESVYEAMLRMLRNNIHHLPVLYRRRPIGVLHLSDIVRHETNSSLYLVDNIFRQP CEEECCHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEHHHHHHHHCCCCCEEEHHHHHCCC NVEALAALKGDVRAAFVRMVNEGDNSQMVGSSLSSIGRSFTRRLLELAEEELGPPPVPYC CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH FMALGSMARNEQSIVTDQDNALVLDDRFDPEQHDAYFLTLAQRVSDGLAACGYSYCKGDV HHHHHHHHCCCCCCEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCCE MATNSRWRQPLRVWQQYFSDWIDNPNAERLLHSSIFFDLDSVHGEEAFAERLQDLVAERA EECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH SQRPRFLAAMARNALNRTPPLGFFRTFVMEKDGKQNNTINLKRRGTAPLVDLIRVHALAC HCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHH GSRAQNSFERLEDIAKTRLLAGHSGERLRYALEFIAMVRIRHQVIDIQEEREPDNDIEPE CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCC NVSDSERHNLKDAFQVLSNAQKFLKFRYPMPSQKR CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA