Click here to switch to the map view.

The map label for this gene is cyoA [H]

Identifier: 92113082

GI number: 92113082

Start: 1072098

End: 1073006

Strand: Direct

Name: cyoA [H]

Synonym: Csal_0954

Alternate gene names: 92113082

Gene position: 1072098-1073006 (Clockwise)

Preceding gene: 92113080

Following gene: 92113083

Centisome position: 29.0

GC content: 58.75

Gene sequence:

>909_bases
ATGAGAATGAAGAAGAACCTGGGATGGCTCGGTATCCTACCCCTGATCGCAGTGTTGCTGAGTGGCTGCGACGCGGCGCT
GGTGGATCCGAAGGGCCAGATCGGGGTGGAACTGAAGTCGCTGATCATCACGGCCTTCTGGCTGATGATGATCGTCGTGA
TTCCCGTCATCGTCATGACCGTGGTCTTTGCCTGGAAGTATCGGCACAGTAACCACGCTGCCAAGTATCTGCCGGACTGG
GCGCACTCGAACAAGATCGAGGCAGTCGTCTGGCTCGTGCCCTGCGTGATCATCCTGTTCCTGGGGATCATCACCTGGAA
AACTTCACACTCGCTGGATCCGCACAAGCCGATCGAGTCGGATGCCGACACCATGGAAGTCCAGGTCGTCGCTCTGGATT
GGAAATGGCTGTTCATCTACCCCGAGCAGGGGATCGCCACGGTCAATGAAGTGGCCATGCCCGTGGATGTGCCGGTCCAC
TTCCGCGTGACCTCGGCCTCGGTGATGAACTCGTTCTTCATTCCCACGCTGGGCAGTCAGATCTATGCCATGGCCGGCAT
GGACAACGACGTGTACCTGGTGGCGAACGAAGCGGGCGTCTACGACGGCAAGTCGTCCAACTACAGTGGCAAGGGCTTCT
CGGAGATGACCTTCGATGCGCGCGCCATGTCCCAGGATGACTTCGAGGCGTGGGTCGACGAAGTCGGACAATCGTCCGAA
ACGCTTTCCTATGACGGGAGCTATCAGGAGTTGGCGGAACCCTCCACGGATCATCCGGTGGAATATTTCTCCGACGTATC
GTCCGGCCTGTACCACGACATCGTCGACAGTTTCCACGGTGGCAATGGGCAAGGTGGACACGGTGGCGGTCATGGCGAGA
CGACCATGAGCGCAGAGGCAGCGGAGTAA

Upstream 100 bases:

>100_bases
GCCTCCCCGCCCGACTGCTGGAGTAACGGGTCGCTAGCGGAGGAAATCATTCAATGAGCAAGCGCTGCAACGTCTTCCCA
TGCTTGAGTGAGGCCATGCA

Downstream 100 bases:

>100_bases
CATTATGTTCGGAAAACTTGGACTCGACGATATTCCCTATCACGAGCCGATCATCGTCGTGACGGCCATCGCCATGGCGC
TCGGTGGCTTGCTCGTCGTC

Product: ubiquinol oxidase, subunit II

Products: NA

Alternate protein names: Cytochrome o subunit 2; Cytochrome o ubiquinol oxidase subunit 2; Ubiquinol oxidase chain B; Oxidase BO(3) subunit 2; Ubiquinol oxidase polypeptide II [H]

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MRMKKNLGWLGILPLIAVLLSGCDAALVDPKGQIGVELKSLIITAFWLMMIVVIPVIVMTVVFAWKYRHSNHAAKYLPDW
AHSNKIEAVVWLVPCVIILFLGIITWKTSHSLDPHKPIESDADTMEVQVVALDWKWLFIYPEQGIATVNEVAMPVDVPVH
FRVTSASVMNSFFIPTLGSQIYAMAGMDNDVYLVANEAGVYDGKSSNYSGKGFSEMTFDARAMSQDDFEAWVDEVGQSSE
TLSYDGSYQELAEPSTDHPVEYFSDVSSGLYHDIVDSFHGGNGQGGHGGGHGETTMSAEAAE

Sequences:

>Translated_302_residues
MRMKKNLGWLGILPLIAVLLSGCDAALVDPKGQIGVELKSLIITAFWLMMIVVIPVIVMTVVFAWKYRHSNHAAKYLPDW
AHSNKIEAVVWLVPCVIILFLGIITWKTSHSLDPHKPIESDADTMEVQVVALDWKWLFIYPEQGIATVNEVAMPVDVPVH
FRVTSASVMNSFFIPTLGSQIYAMAGMDNDVYLVANEAGVYDGKSSNYSGKGFSEMTFDARAMSQDDFEAWVDEVGQSSE
TLSYDGSYQELAEPSTDHPVEYFSDVSSGLYHDIVDSFHGGNGQGGHGGGHGETTMSAEAAE
>Mature_302_residues
MRMKKNLGWLGILPLIAVLLSGCDAALVDPKGQIGVELKSLIITAFWLMMIVVIPVIVMTVVFAWKYRHSNHAAKYLPDW
AHSNKIEAVVWLVPCVIILFLGIITWKTSHSLDPHKPIESDADTMEVQVVALDWKWLFIYPEQGIATVNEVAMPVDVPVH
FRVTSASVMNSFFIPTLGSQIYAMAGMDNDVYLVANEAGVYDGKSSNYSGKGFSEMTFDARAMSQDDFEAWVDEVGQSSE
TLSYDGSYQELAEPSTDHPVEYFSDVSSGLYHDIVDSFHGGNGQGGHGGGHGETTMSAEAAE

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=313, Percent_Identity=54.6325878594249, Blast_Score=343, Evalue=9e-96,
Organism=Saccharomyces cerevisiae, GI6226540, Length=216, Percent_Identity=25, Blast_Score=63, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR010514
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- InterPro:   IPR006333 [H]

Pfam domain/function: PF00116 COX2; PF06481 COX_ARM [H]

EC number: 1.10.3.-

Molecular weight: Translated: 33144; Mature: 33144

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMKKNLGWLGILPLIAVLLSGCDAALVDPKGQIGVELKSLIITAFWLMMIVVIPVIVMT
CCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VVFAWKYRHSNHAAKYLPDWAHSNKIEAVVWLVPCVIILFLGIITWKTSHSLDPHKPIES
HHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DADTMEVQVVALDWKWLFIYPEQGIATVNEVAMPVDVPVHFRVTSASVMNSFFIPTLGSQ
CCCCEEEEEEEEEEEEEEEECCCCCCHHHHHCCCCCCCEEEEECHHHHHHHHCCCCCCCC
IYAMAGMDNDVYLVANEAGVYDGKSSNYSGKGFSEMTFDARAMSQDDFEAWVDEVGQSSE
EEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCC
TLSYDGSYQELAEPSTDHPVEYFSDVSSGLYHDIVDSFHGGNGQGGHGGGHGETTMSAEA
CEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
AE
CC
>Mature Secondary Structure
MRMKKNLGWLGILPLIAVLLSGCDAALVDPKGQIGVELKSLIITAFWLMMIVVIPVIVMT
CCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VVFAWKYRHSNHAAKYLPDWAHSNKIEAVVWLVPCVIILFLGIITWKTSHSLDPHKPIES
HHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DADTMEVQVVALDWKWLFIYPEQGIATVNEVAMPVDVPVHFRVTSASVMNSFFIPTLGSQ
CCCCEEEEEEEEEEEEEEEECCCCCCHHHHHCCCCCCCEEEEECHHHHHHHHCCCCCCCC
IYAMAGMDNDVYLVANEAGVYDGKSSNYSGKGFSEMTFDARAMSQDDFEAWVDEVGQSSE
EEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCC
TLSYDGSYQELAEPSTDHPVEYFSDVSSGLYHDIVDSFHGGNGQGGHGGGHGETTMSAEA
CEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
AE
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]