| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is apaH
Identifier: 92113050
GI number: 92113050
Start: 1036192
End: 1037010
Strand: Direct
Name: apaH
Synonym: Csal_0922
Alternate gene names: 92113050
Gene position: 1036192-1037010 (Clockwise)
Preceding gene: 92113049
Following gene: 92113051
Centisome position: 28.03
GC content: 69.47
Gene sequence:
>819_bases ATGTCGACGTATGCCATCGGCGATTTGCAGGGATGCCACGCGGAGTTCGAGGCCTTGCTGGAACGCATCGCCTTCGAGCC GCGCCGTGATCGGTTATGGCTGGTAGGCGACCTGGTCAACCGCGGCCCGGGGTCGCTGGCGTGCTTGCGCGCGGTCAAGG CGCTGGGGGACAGCGCCCGCGTGGTACTGGGCAACCATGACCTGCACCTGCTGGCGGCGGCGTGGGCCGGCGCCCCGCTG AAGCGTTCCGATACGCTGGCGCCGATCCTCGAGGCCGACGACCGCGACGAGCTGCTCGACTGGTTGCGTCGGCAGCCCTT GCTGGTGCGCGATGACGAGCTGGACGCGGTGATGACCCATGCCGGGCTTCCGCCGCATTGGTCGGTGACGCAGGCGGCCG AGCATGCCGCCGAGGTCGAGCGAGCGTTGCGCGGCGAGGCGGTGGGCGACTTCCTGGCGGCGATGTATGGCAACTCGCCG GCCCGCTGGACCGACGAGCTGGAGGGGATCGACCGCCTGCGGGTGATCGTCAATACCTTCACGCGCATGCGCTTCATCGC CGCCGACGGCACGCTCGACTTTGCCGCCAAGGAAGGACTGGACAGTGCGCCCGAAGGTTTCGCGCCCTGGTTCACCTATG CGCGAGACGATGATCCTCGTATCGTGTTCGGTCATTGGGCGGCGCTGCAGGGGGCGACGCCCGGCGCGCGGGTCCGTGCC CTGGCGCTGGACACCGGCTGCGTGTGGGGCGGTGCCTTGACCGCGCTCGACCTGGTCAGCGGCGAGTACCATGTCGAACC GGCCCACGCCTCACGCTGA
Upstream 100 bases:
>100_bases TCAGGTGCATTGATCGGGGGAGGGGGCGGGCCTGCAGGCCACCAGGCATGAAGGGCAGTCCCCGGCTTGTTCCAGCCACC AAGACCGTTCAGGAGAGACT
Downstream 100 bases:
>100_bases CACCTGCCATCCGAGGAGCGTTTTGATGACCCAAGAGACTGCGTTTACCCATCTCGCGCCGAGCACGCTCGTGCATTGGC TCGACACGGCCTGCGAGCTG
Product: diadenosine tetraphosphatase
Products: NA
Alternate protein names: Ap4A hydrolase; Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase; Diadenosine tetraphosphatase
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MSTYAIGDLQGCHAEFEALLERIAFEPRRDRLWLVGDLVNRGPGSLACLRAVKALGDSARVVLGNHDLHLLAAAWAGAPL KRSDTLAPILEADDRDELLDWLRRQPLLVRDDELDAVMTHAGLPPHWSVTQAAEHAAEVERALRGEAVGDFLAAMYGNSP ARWTDELEGIDRLRVIVNTFTRMRFIAADGTLDFAAKEGLDSAPEGFAPWFTYARDDDPRIVFGHWAALQGATPGARVRA LALDTGCVWGGALTALDLVSGEYHVEPAHASR
Sequences:
>Translated_272_residues MSTYAIGDLQGCHAEFEALLERIAFEPRRDRLWLVGDLVNRGPGSLACLRAVKALGDSARVVLGNHDLHLLAAAWAGAPL KRSDTLAPILEADDRDELLDWLRRQPLLVRDDELDAVMTHAGLPPHWSVTQAAEHAAEVERALRGEAVGDFLAAMYGNSP ARWTDELEGIDRLRVIVNTFTRMRFIAADGTLDFAAKEGLDSAPEGFAPWFTYARDDDPRIVFGHWAALQGATPGARVRA LALDTGCVWGGALTALDLVSGEYHVEPAHASR >Mature_271_residues STYAIGDLQGCHAEFEALLERIAFEPRRDRLWLVGDLVNRGPGSLACLRAVKALGDSARVVLGNHDLHLLAAAWAGAPLK RSDTLAPILEADDRDELLDWLRRQPLLVRDDELDAVMTHAGLPPHWSVTQAAEHAAEVERALRGEAVGDFLAAMYGNSPA RWTDELEGIDRLRVIVNTFTRMRFIAADGTLDFAAKEGLDSAPEGFAPWFTYARDDDPRIVFGHWAALQGATPGARVRAL ALDTGCVWGGALTALDLVSGEYHVEPAHASR
Specific function: Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ap4A hydrolase family
Homologues:
Organism=Escherichia coli, GI1786234, Length=274, Percent_Identity=50.7299270072993, Blast_Score=265, Evalue=3e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): APAH_CHRSD (Q1QZ29)
Other databases:
- EMBL: CP000285 - RefSeq: YP_572978.1 - ProteinModelPortal: Q1QZ29 - SMR: Q1QZ29 - STRING: Q1QZ29 - GeneID: 4027429 - GenomeReviews: CP000285_GR - KEGG: csa:Csal_0922 - NMPDR: fig|290398.4.peg.914 - eggNOG: COG0639 - HOGENOM: HBG724457 - OMA: LVFGHWA - ProtClustDB: PRK00166 - BioCyc: CSAL290398:CSAL_0922-MONOMER - HAMAP: MF_00199 - InterPro: IPR004617 - InterPro: IPR004843 - PIRSF: PIRSF000903 - TIGRFAMs: TIGR00668
Pfam domain/function: PF00149 Metallophos
EC number: =3.6.1.41
Molecular weight: Translated: 29679; Mature: 29548
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTYAIGDLQGCHAEFEALLERIAFEPRRDRLWLVGDLVNRGPGSLACLRAVKALGDSAR CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHCCCCCHHHHHHHHHHCCCCCE VVLGNHDLHLLAAAWAGAPLKRSDTLAPILEADDRDELLDWLRRQPLLVRDDELDAVMTH EEECCCCEEEEEEHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCCCEEECCCHHHHHHH AGLPPHWSVTQAAEHAAEVERALRGEAVGDFLAAMYGNSPARWTDELEGIDRLRVIVNTF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH TRMRFIAADGTLDFAAKEGLDSAPEGFAPWFTYARDDDPRIVFGHWAALQGATPGARVRA HHHEEEECCCCEEHHHHCCCCCCCCCCCCCEECCCCCCCCEEEEEHHHHCCCCCCCEEEE LALDTGCVWGGALTALDLVSGEYHVEPAHASR EEEECCCCHHHHHHHHHHHCCCEEECCCCCCC >Mature Secondary Structure STYAIGDLQGCHAEFEALLERIAFEPRRDRLWLVGDLVNRGPGSLACLRAVKALGDSAR CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHCCCCCHHHHHHHHHHCCCCCE VVLGNHDLHLLAAAWAGAPLKRSDTLAPILEADDRDELLDWLRRQPLLVRDDELDAVMTH EEECCCCEEEEEEHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCCCEEECCCHHHHHHH AGLPPHWSVTQAAEHAAEVERALRGEAVGDFLAAMYGNSPARWTDELEGIDRLRVIVNTF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH TRMRFIAADGTLDFAAKEGLDSAPEGFAPWFTYARDDDPRIVFGHWAALQGATPGARVRA HHHEEEECCCCEEHHHHCCCCCCCCCCCCCEECCCCCCCCEEEEEHHHHCCCCCCCEEEE LALDTGCVWGGALTALDLVSGEYHVEPAHASR EEEECCCCHHHHHHHHHHHCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA