| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is hemH [H]
Identifier: 92113025
GI number: 92113025
Start: 1009666
End: 1010652
Strand: Direct
Name: hemH [H]
Synonym: Csal_0897
Alternate gene names: 92113025
Gene position: 1009666-1010652 (Clockwise)
Preceding gene: 92113023
Following gene: 92113032
Centisome position: 27.31
GC content: 65.75
Gene sequence:
>987_bases ATGGGGTCAGCACCCTTTGGTGTCATGCTCGTCAATCTTGGCACGCCCGAGGCCCCCACCACGTCGGCAGTACGTCGCTA TCTGGCAGAGTTCCTGGGTGACCCGCGCGTCATCGACCTGCCGCGCGTCAAATGGTTGCCGATCCTGCACGGGATCATCC TGCGCATACGGCCGCCGCGAGTGGCCAAGGCCTATGCTTCCGTGTGGCAGGACGAAGGCTCGCCGCTGCTCGCCATCGGG CGTCGCCAGCAACGCGCGCTCAAGGCACGCCTGGCGGCGCGGCTGGGGACCGACATTCCCGTCGAGCTGGCGATGACCTA CGGCAAGCCGAGCATGGAGGAGGCCGGCCTGGCGCTGCGCGATGCCGGTGTCGAGCGCATCCTGGTGTTGCCTCTGTACC CGCAGTACTCCGCCACGACGACCGGTGCCGTCTTCGACCGTCTGGCGCGTGCCTTGTCGCCCTGCCCGCATCTGCCGGAG CTGCGTTTCGTGCGGGATTACCACGATCATCCGGCTTACATCGAGGCACTGGCGGAAAGCATTCGCGAGCACTGGGAGAC GCATGGCCGGCAACCACGTCTGTTGTTCTCGTACCACGGCATTCCCAAGCGCTATGCCGAGGCGGGTGATCCTTATCCGC GTCACTGCGAGACGACCAGCCGGCTGGTCGCCGAGGCGTTGGGGCTCGAGCCCGAGGCGTGGCAGCAGACCTATCAATCG CGCTTCGGGCGCGAGGAATGGCTCAAGCCGTATACCGACGACACGCTGAAAGCCTGGGGCGTCGAGGGGCTCGAAGGCGT CGATGTGATCAGCCCGGCCTTCGCCGCCGACTGCCTGGAAACGCTGGAGGAACTGGAGGTGGAGAATCGCGGTTACTTCA CCGAGGCGGGCGGCGGTGACTACCGCTACATCCCTGCGCTCAACGACCGTGCCGCGCATATCGACATGCTGGCTTCACTC GTCGAGCAGCACACTCAAGGCTGGTAG
Upstream 100 bases:
>100_bases CCAGATATTGTACAAATTGTCTTCATAGTATAACGCGATAAGCATAATATGCCCGTCGCTTGTTACACTGCCTGACACGG TCTTTTATAGGAGAGGTTTC
Downstream 100 bases:
>100_bases GTCATCGGAGCTGGCCGGCAACGCGCCCGAGCGGGTCTACCGCTCGGGCGCGTTCACGTGAGGGGTGGGTCAGGGAAGCT TCGAATCGCCCTGCGGGGCT
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MGSAPFGVMLVNLGTPEAPTTSAVRRYLAEFLGDPRVIDLPRVKWLPILHGIILRIRPPRVAKAYASVWQDEGSPLLAIG RRQQRALKARLAARLGTDIPVELAMTYGKPSMEEAGLALRDAGVERILVLPLYPQYSATTTGAVFDRLARALSPCPHLPE LRFVRDYHDHPAYIEALAESIREHWETHGRQPRLLFSYHGIPKRYAEAGDPYPRHCETTSRLVAEALGLEPEAWQQTYQS RFGREEWLKPYTDDTLKAWGVEGLEGVDVISPAFAADCLETLEELEVENRGYFTEAGGGDYRYIPALNDRAAHIDMLASL VEQHTQGW
Sequences:
>Translated_328_residues MGSAPFGVMLVNLGTPEAPTTSAVRRYLAEFLGDPRVIDLPRVKWLPILHGIILRIRPPRVAKAYASVWQDEGSPLLAIG RRQQRALKARLAARLGTDIPVELAMTYGKPSMEEAGLALRDAGVERILVLPLYPQYSATTTGAVFDRLARALSPCPHLPE LRFVRDYHDHPAYIEALAESIREHWETHGRQPRLLFSYHGIPKRYAEAGDPYPRHCETTSRLVAEALGLEPEAWQQTYQS RFGREEWLKPYTDDTLKAWGVEGLEGVDVISPAFAADCLETLEELEVENRGYFTEAGGGDYRYIPALNDRAAHIDMLASL VEQHTQGW >Mature_327_residues GSAPFGVMLVNLGTPEAPTTSAVRRYLAEFLGDPRVIDLPRVKWLPILHGIILRIRPPRVAKAYASVWQDEGSPLLAIGR RQQRALKARLAARLGTDIPVELAMTYGKPSMEEAGLALRDAGVERILVLPLYPQYSATTTGAVFDRLARALSPCPHLPEL RFVRDYHDHPAYIEALAESIREHWETHGRQPRLLFSYHGIPKRYAEAGDPYPRHCETTSRLVAEALGLEPEAWQQTYQSR FGREEWLKPYTDDTLKAWGVEGLEGVDVISPAFAADCLETLEELEVENRGYFTEAGGGDYRYIPALNDRAAHIDMLASLV EQHTQGW
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499021, Length=331, Percent_Identity=27.190332326284, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI60499025, Length=331, Percent_Identity=27.190332326284, Blast_Score=102, Evalue=4e-22, Organism=Escherichia coli, GI1786681, Length=315, Percent_Identity=54.2857142857143, Blast_Score=324, Evalue=4e-90, Organism=Saccharomyces cerevisiae, GI6324750, Length=333, Percent_Identity=24.024024024024, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI17864156, Length=330, Percent_Identity=26.6666666666667, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI24651774, Length=260, Percent_Identity=26.1538461538462, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI45552018, Length=163, Percent_Identity=30.0613496932515, Blast_Score=78, Evalue=9e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 36794; Mature: 36663
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSAPFGVMLVNLGTPEAPTTSAVRRYLAEFLGDPRVIDLPRVKWLPILHGIILRIRPPR CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHCCCCH VAKAYASVWQDEGSPLLAIGRRQQRALKARLAARLGTDIPVELAMTYGKPSMEEAGLALR HHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHCCHHH DAGVERILVLPLYPQYSATTTGAVFDRLARALSPCPHLPELRFVRDYHDHPAYIEALAES HCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHH IREHWETHGRQPRLLFSYHGIPKRYAEAGDPYPRHCETTSRLVAEALGLEPEAWQQTYQS HHHHHHHCCCCCEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH RFGREEWLKPYTDDTLKAWGVEGLEGVDVISPAFAADCLETLEELEVENRGYFTEAGGGD HCCHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC YRYIPALNDRAAHIDMLASLVEQHTQGW EEEECCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GSAPFGVMLVNLGTPEAPTTSAVRRYLAEFLGDPRVIDLPRVKWLPILHGIILRIRPPR CCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHCCCCH VAKAYASVWQDEGSPLLAIGRRQQRALKARLAARLGTDIPVELAMTYGKPSMEEAGLALR HHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHCCHHH DAGVERILVLPLYPQYSATTTGAVFDRLARALSPCPHLPELRFVRDYHDHPAYIEALAES HCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHH IREHWETHGRQPRLLFSYHGIPKRYAEAGDPYPRHCETTSRLVAEALGLEPEAWQQTYQS HHHHHHHCCCCCEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH RFGREEWLKPYTDDTLKAWGVEGLEGVDVISPAFAADCLETLEELEVENRGYFTEAGGGD HCCHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC YRYIPALNDRAAHIDMLASLVEQHTQGW EEEECCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA