| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is ywiE [H]
Identifier: 92112990
GI number: 92112990
Start: 966228
End: 967340
Strand: Direct
Name: ywiE [H]
Synonym: Csal_0862
Alternate gene names: 92112990
Gene position: 966228-967340 (Clockwise)
Preceding gene: 92112988
Following gene: 92112992
Centisome position: 26.14
GC content: 66.31
Gene sequence:
>1113_bases ATGCGCGGACGTTGGCAGGGAGGCAACCGGTTCACGTTGCTGCCGGAGGGGAAGCGATTTCTCCCCGAATTGTTTGCCGC GATCGAATCGGCGCAGCGCACGCTGTATCTCGAGCTGTACCTCATGGAATCCGGCACCCTGGCCACGCGCATGGTCGATG CCTTGTGCGCGGCGGCGCACCGTGGGGTCACGGTGCGCGTGCTGCTCGACGGCTACGGATCGATGAAACTCTCCCACGCC GATCGCCAGCGCCTGCGCGATGCCGGGGTGGCGCTGCGCTTCTTCAATCCCCTGAGCTGGCATCGCCTGGGGGGCAATTT GTCGCGCGATCACCGCAAGCTGCTGGTCGTCGACGACCGGCTGGCCTTCACGGGCGGTTTCGGTGCCGTGGATGCCTTCG TCGATGCCTGGTATGAAGTGGCCGTGCGCATCGAAGGGCCGGTGGTCGCGGACTGGATCGGCCTGTTCGCGCAGCTCTGG GAATCGCCCCTGACCCGTGGGCGCGCGGCGCGGTGTCGCTGGCCCGAACCCGCCCCCATCGCGGCGCTGCCGGACGACAT GCGCGGGCGCATGATCAGCGGGCGGGGCCACCGGTATCAGGCGATTCGCCTATCGTTGCATCAGCGCATCGCCACCGCCG AACGTCGGCTGTGGTTATGTACGCCGTATTTCATGCCGACGTTCAGCCTGCGCCGTCGGCTGGTGCGGGCGGCGCGGCTG GGCGTCGATGTGCGTCTGCTGCTGCCGGGCTCGCGTCACGATCATCCCGGCATCCGTTATGCCGGGCAGCGTTTCTATGC GCGATTGCTGCGTGCGGGCGTGCGCATCTACGAGTTCCAGCCCACCTTCATCCATGCCAAGTTCGTGCTGGCCGACGACT GGACCTCGATCGGTTCGTGCAATTTCGATCACTGGAGCCTGCAGTGGAATCTGGAGGCCAATCAGGAAGTCGAGGACGTA CGCTTCGCGCGCGACGTGGCAGCGCTTTTCGAACGCAACTTCGCCGCGAGCGAAGAGATCCATTGGGCGCAATGGCGTCG CCGTCCCTGGATGCAGCGCTGCCGCGAGTGGGTCTTCGGCACGCTCAACGGGTGGATGACGCGGCTGCGCTGA
Upstream 100 bases:
>100_bases GAGATCGACTCGCCCAACGGCGCCGCTTTTCAAGGGCATGGCAAACGTGCGTCAATACTGAATCACGCGAGCCGCCGAGA TCGGTCACCAAGGAGATACC
Downstream 100 bases:
>100_bases CGATCGCCTAGCGGCGCCCCTTGCCGCCCGCGCCCCCGGCGGGTTTTTTCTTGCGCGGGGTGGGCTTGGGTTTTTCCTCG GGGACCCGGTAGTGCAGGTA
Product: phospholipase D/transphosphatidylase
Products: cardiolipin; glycerol [C]
Alternate protein names: CL synthase 1 [H]
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MRGRWQGGNRFTLLPEGKRFLPELFAAIESAQRTLYLELYLMESGTLATRMVDALCAAAHRGVTVRVLLDGYGSMKLSHA DRQRLRDAGVALRFFNPLSWHRLGGNLSRDHRKLLVVDDRLAFTGGFGAVDAFVDAWYEVAVRIEGPVVADWIGLFAQLW ESPLTRGRAARCRWPEPAPIAALPDDMRGRMISGRGHRYQAIRLSLHQRIATAERRLWLCTPYFMPTFSLRRRLVRAARL GVDVRLLLPGSRHDHPGIRYAGQRFYARLLRAGVRIYEFQPTFIHAKFVLADDWTSIGSCNFDHWSLQWNLEANQEVEDV RFARDVAALFERNFAASEEIHWAQWRRRPWMQRCREWVFGTLNGWMTRLR
Sequences:
>Translated_370_residues MRGRWQGGNRFTLLPEGKRFLPELFAAIESAQRTLYLELYLMESGTLATRMVDALCAAAHRGVTVRVLLDGYGSMKLSHA DRQRLRDAGVALRFFNPLSWHRLGGNLSRDHRKLLVVDDRLAFTGGFGAVDAFVDAWYEVAVRIEGPVVADWIGLFAQLW ESPLTRGRAARCRWPEPAPIAALPDDMRGRMISGRGHRYQAIRLSLHQRIATAERRLWLCTPYFMPTFSLRRRLVRAARL GVDVRLLLPGSRHDHPGIRYAGQRFYARLLRAGVRIYEFQPTFIHAKFVLADDWTSIGSCNFDHWSLQWNLEANQEVEDV RFARDVAALFERNFAASEEIHWAQWRRRPWMQRCREWVFGTLNGWMTRLR >Mature_370_residues MRGRWQGGNRFTLLPEGKRFLPELFAAIESAQRTLYLELYLMESGTLATRMVDALCAAAHRGVTVRVLLDGYGSMKLSHA DRQRLRDAGVALRFFNPLSWHRLGGNLSRDHRKLLVVDDRLAFTGGFGAVDAFVDAWYEVAVRIEGPVVADWIGLFAQLW ESPLTRGRAARCRWPEPAPIAALPDDMRGRMISGRGHRYQAIRLSLHQRIATAERRLWLCTPYFMPTFSLRRRLVRAARL GVDVRLLLPGSRHDHPGIRYAGQRFYARLLRAGVRIYEFQPTFIHAKFVLADDWTSIGSCNFDHWSLQWNLEANQEVEDV RFARDVAALFERNFAASEEIHWAQWRRRPWMQRCREWVFGTLNGWMTRLR
Specific function: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI1787007, Length=337, Percent_Identity=33.5311572700297, Blast_Score=151, Evalue=8e-38, Organism=Escherichia coli, GI1787502, Length=368, Percent_Identity=29.0760869565217, Blast_Score=149, Evalue=3e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022924 - InterPro: IPR001736 [H]
Pfam domain/function: PF00614 PLDc [H]
EC number: 2.7.8.- [C]
Molecular weight: Translated: 42892; Mature: 42892
Theoretical pI: Translated: 11.00; Mature: 11.00
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGRWQGGNRFTLLPEGKRFLPELFAAIESAQRTLYLELYLMESGTLATRMVDALCAAAH CCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHH RGVTVRVLLDGYGSMKLSHADRQRLRDAGVALRFFNPLSWHRLGGNLSRDHRKLLVVDDR CCCEEEEEECCCCCEEECHHHHHHHHHHCEEEEECCCCHHHHCCCCCCCCCCEEEEEECC LAFTGGFGAVDAFVDAWYEVAVRIEGPVVADWIGLFAQLWESPLTRGRAARCRWPEPAPI EEEECCCHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC AALPDDMRGRMISGRGHRYQAIRLSLHQRIATAERRLWLCTPYFMPTFSLRRRLVRAARL CCCCCHHCCCEECCCCCEEHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHHC GVDVRLLLPGSRHDHPGIRYAGQRFYARLLRAGVRIYEFQPTFIHAKFVLADDWTSIGSC CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCEEEEEEEEEECCCCCCCCC NFDHWSLQWNLEANQEVEDVRFARDVAALFERNFAASEEIHWAQWRRRPWMQRCREWVFG CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHH TLNGWMTRLR HHHHHHHHCC >Mature Secondary Structure MRGRWQGGNRFTLLPEGKRFLPELFAAIESAQRTLYLELYLMESGTLATRMVDALCAAAH CCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHH RGVTVRVLLDGYGSMKLSHADRQRLRDAGVALRFFNPLSWHRLGGNLSRDHRKLLVVDDR CCCEEEEEECCCCCEEECHHHHHHHHHHCEEEEECCCCHHHHCCCCCCCCCCEEEEEECC LAFTGGFGAVDAFVDAWYEVAVRIEGPVVADWIGLFAQLWESPLTRGRAARCRWPEPAPI EEEECCCHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC AALPDDMRGRMISGRGHRYQAIRLSLHQRIATAERRLWLCTPYFMPTFSLRRRLVRAARL CCCCCHHCCCEECCCCCEEHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHHC GVDVRLLLPGSRHDHPGIRYAGQRFYARLLRAGVRIYEFQPTFIHAKFVLADDWTSIGSC CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCEEEEEEEEEECCCCCCCCC NFDHWSLQWNLEANQEVEDVRFARDVAALFERNFAASEEIHWAQWRRRPWMQRCREWVFG CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHH TLNGWMTRLR HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2 L-1-phosphatidyl-glycerol [C]
Specific reaction: 2 L-1-phosphatidyl-glycerol = cardiolipin + glycerol [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8846791; 9353933; 9384377 [H]