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The map label for this gene is scpA [H]

Identifier: 92112977

GI number: 92112977

Start: 949132

End: 950046

Strand: Direct

Name: scpA [H]

Synonym: Csal_0849

Alternate gene names: 92112977

Gene position: 949132-950046 (Clockwise)

Preceding gene: 92112976

Following gene: 92112978

Centisome position: 25.68

GC content: 66.12

Gene sequence:

>915_bases
GTGAGCGATACAGCCCAGCCCACCGATGCCGATACGGCGCCGGCCGTTGCCCAGGCGTCGGTGTTGGCGCGCCTGCACGA
CCAGCCCATCACCGAGCTGCCGGAAGATCTCTACATTCCGCCCGAGGCGCTGCGTGTCTTTCTCGAGACCTTCGAGGGGC
CGCTCGACCTGCTGCTATACCTGATTCGGCGTCAGAATCTCGATATCCTGAGCATCGACGTGGCGGCCATCACCCATCAG
TACATCGAGTACGTCGAGCTGATGCGGGCCCTGGAGATCGATCTGGCGGGCGAGTACCTGCTGATGGCGGCCATGCTGGC
GGAGATCAAGTCGCGCTCGTTGCTGCCACGACCGCCCAAGGGCGACGACGAGGACGACGAGGACCCGCGTGCCGAGCTGA
TTCGCCGCCTGCAGGAGTACGAACAGTTGAAGCTGGCCGCCGAGGGGCTCGACGCACTGCCGCGCGAGGGGCGCGACTGG
GTGGTGGCGCAAGCCGCGCTGCCGTCCCTGGAGACGCGCGTGATCCACCCCGAGGTCGAGCTGGACGAGCTCTTGCATGC
CTTGTCGGGCCTGCTCAAGCGCGCCGAGTTTCAGCAGTCGCACCAGATCAGTCGTGAGGTGCTGTCCACGCGCGAGCGCA
TGCTGCGCATCATGGAACGGCTCGAGGGGCAGCGTTACGTGCCCTTCGAGGCACTGTTCACGCTCGAGGAGGGGCGCGCC
GGCGTGGTGGTGACCTTCATGGCGATTCTCGAGCTGGCCAAGGAAGCCATGATCGATATCACGCAGAACGCTCCGCTGTC
GCCGATCCACGTGCGCGCGCGTCTGACGCCGGACGTCGACGACGACGGCAGCGGGGCGGAGGACGACGATGGCGGAGAAA
GTGCCTTCGCCGATGCCGAAGAGGAACCGCAATGA

Upstream 100 bases:

>100_bases
GCCTCGCGCCACGCGGGCGTGTTCGCTCCCCGGCGGCCTTGCTACACTGCGCGTTTGTCGAAGGTCGCGCCGTGAGGCGC
AGTCGAGGAGAGGGTCCCGC

Downstream 100 bases:

>100_bases
ACGAGGCGCCCACGTCTCTCGACGAGGTCTGCGAAGCCGCGTTGCTGGCTGCCGGCGAGCCGCTGACGCCGGAGCGTCTG
GAAACCCTGTTCGACGAGCG

Product: condensin subunit ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MSDTAQPTDADTAPAVAQASVLARLHDQPITELPEDLYIPPEALRVFLETFEGPLDLLLYLIRRQNLDILSIDVAAITHQ
YIEYVELMRALEIDLAGEYLLMAAMLAEIKSRSLLPRPPKGDDEDDEDPRAELIRRLQEYEQLKLAAEGLDALPREGRDW
VVAQAALPSLETRVIHPEVELDELLHALSGLLKRAEFQQSHQISREVLSTRERMLRIMERLEGQRYVPFEALFTLEEGRA
GVVVTFMAILELAKEAMIDITQNAPLSPIHVRARLTPDVDDDGSGAEDDDGGESAFADAEEEPQ

Sequences:

>Translated_304_residues
MSDTAQPTDADTAPAVAQASVLARLHDQPITELPEDLYIPPEALRVFLETFEGPLDLLLYLIRRQNLDILSIDVAAITHQ
YIEYVELMRALEIDLAGEYLLMAAMLAEIKSRSLLPRPPKGDDEDDEDPRAELIRRLQEYEQLKLAAEGLDALPREGRDW
VVAQAALPSLETRVIHPEVELDELLHALSGLLKRAEFQQSHQISREVLSTRERMLRIMERLEGQRYVPFEALFTLEEGRA
GVVVTFMAILELAKEAMIDITQNAPLSPIHVRARLTPDVDDDGSGAEDDDGGESAFADAEEEPQ
>Mature_303_residues
SDTAQPTDADTAPAVAQASVLARLHDQPITELPEDLYIPPEALRVFLETFEGPLDLLLYLIRRQNLDILSIDVAAITHQY
IEYVELMRALEIDLAGEYLLMAAMLAEIKSRSLLPRPPKGDDEDDEDPRAELIRRLQEYEQLKLAAEGLDALPREGRDWV
VAQAALPSLETRVIHPEVELDELLHALSGLLKRAEFQQSHQISREVLSTRERMLRIMERLEGQRYVPFEALFTLEEGRAG
VVVTFMAILELAKEAMIDITQNAPLSPIHVRARLTPDVDDDGSGAEDDDGGESAFADAEEEPQ

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 34054; Mature: 33923

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTAQPTDADTAPAVAQASVLARLHDQPITELPEDLYIPPEALRVFLETFEGPLDLLLY
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCHHCCCCHHHHHHHHHHHCCHHHHHHH
LIRRQNLDILSIDVAAITHQYIEYVELMRALEIDLAGEYLLMAAMLAEIKSRSLLPRPPK
HHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCC
GDDEDDEDPRAELIRRLQEYEQLKLAAEGLDALPREGRDWVVAQAALPSLETRVIHPEVE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHCCCHHHEEECCCCC
LDELLHALSGLLKRAEFQQSHQISREVLSTRERMLRIMERLEGQRYVPFEALFTLEEGRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
GVVVTFMAILELAKEAMIDITQNAPLSPIHVRARLTPDVDDDGSGAEDDDGGESAFADAE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHCCCCC
EEPQ
CCCC
>Mature Secondary Structure 
SDTAQPTDADTAPAVAQASVLARLHDQPITELPEDLYIPPEALRVFLETFEGPLDLLLY
CCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCHHCCCCHHHHHHHHHHHCCHHHHHHH
LIRRQNLDILSIDVAAITHQYIEYVELMRALEIDLAGEYLLMAAMLAEIKSRSLLPRPPK
HHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCC
GDDEDDEDPRAELIRRLQEYEQLKLAAEGLDALPREGRDWVVAQAALPSLETRVIHPEVE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHCCCHHHEEECCCCC
LDELLHALSGLLKRAEFQQSHQISREVLSTRERMLRIMERLEGQRYVPFEALFTLEEGRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
GVVVTFMAILELAKEAMIDITQNAPLSPIHVRARLTPDVDDDGSGAEDDDGGESAFADAE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHCCCCC
EEPQ
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]