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The map label for this gene is yedQ [H]

Identifier: 92112821

GI number: 92112821

Start: 772157

End: 773398

Strand: Direct

Name: yedQ [H]

Synonym: Csal_0689

Alternate gene names: 92112821

Gene position: 772157-773398 (Clockwise)

Preceding gene: 92112820

Following gene: 92112824

Centisome position: 20.89

GC content: 63.77

Gene sequence:

>1242_bases
ATGCAGGGGAAGGTCCGTCGCATGACGTGGCCTAACGCAATGAAAAGGGATTCGTTGATCATGCCACTACGTCTACATCG
CCCATGGGGCGAAGGAGGGCCGCCGCTGCCGCCGCGCTGTCCTTTGCCACCGGAACGCCGTCGCTATTTCGACACTTTCG
CCCATCTTTACGGCATGGCGCTGGTGGCCTATGCCGGCTTGATGATGCCGTTGTTTCTCTGGCTGGGGCATCCTTGGCCG
GTGGGAATCGTGCTGGCCAGTCTGATTGTGACGCTGATCGCACGCGGTCTGCATCTTCGAGGCCACATGGCATGGGGCGC
GGGACTGTTATGGGCGGTGATGGTGGTCCTCATTTGCGAGGCCATCCGTCTCTACGGCGCCGGCGTCGGGTTCGAATTCT
ATGTAGGGCTGGCATTGCTGGTGCTGCATATCAGCGCCCTGCCTCGGGCCTGCAAGATCGTCTTGTCATGCCTGCTGATA
GGTGTGGTAGGCATCTTGCTGATCAGTGTGCACCGCGACATGCCGCCGGCGTCTCTTTCTCCGGCCATGGCCACGGGGCT
GTTATGGATCAATCTGGCCATGATGGGGATGCTGTTCGGCGGTGTGCTCATGGGGCTGGAAGGCGTCACCGAGCGCCTCG
AGCGCACCTACCGCCGTGAGGCGCTGCACGACATGTTGACCGGCGCGCTCAACCGGCGTGCGATCCTGTCCATCGCCGAG
CGCTGGCGTCGCGCGCAGTGTCCCTTCGCGCTGGTGCTGCTGGACGTCGATCATTTCAAGCGCTTCAACGACCTGCATGG
CCATGCCACGGGGGATGCAGCCCTGTGTCACCTGGTGAACTGCTTGCAGCAGGGCCTGCGAGAAGGTGACATGCTGGGCC
GCTACGGTGGCGAGGAATTCATGCTGTTGCTGCCCGGCATGACGCGTGGTGCCGCCATGACGGTGGCGGAGCGTATCGCC
GCGCTGGTACGCGAGCAGCCCCTGGCATTGCCCGACAAGTCGCTTGGCATGACCGTCAGCCAGGGCATCGCGGCCGAGGA
TGAAGCCGCGACGCTTGGCGAGATGATCGAACTGGCCGACCGACGGCTGTACGCCGCCAAGCATGCCGGGCGCGATCGCG
TCATGGCATGGGACGCGTTCGAGACGCTGTCGCCGCTTCCCGATCAGCGAATCGCCGAAGGGGCGGAGGCCTGTGCGTTC
TCGCCCCCTCGGCGGCATGACGATTCAGTGATCAAGGCGTGA

Upstream 100 bases:

>100_bases
TTATTTGGCGTTTGACGAATTTCATGCCGCAAAGTGGCTAAATTCATACACGAATCGTCCTTTTGATACGCCGAGTCTGG
CTAACCTTGCTAGGGAATCG

Downstream 100 bases:

>100_bases
CATCAAGCGGGCGAGCCCATGCTGAAGCCGCTCGCTGAGGCGCGCGGCGCAGGCGGTGCACAGCACCCAGGGGAGCGTCA
GCAGGGCGATGGCCAGGGCC

Product: diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MQGKVRRMTWPNAMKRDSLIMPLRLHRPWGEGGPPLPPRCPLPPERRRYFDTFAHLYGMALVAYAGLMMPLFLWLGHPWP
VGIVLASLIVTLIARGLHLRGHMAWGAGLLWAVMVVLICEAIRLYGAGVGFEFYVGLALLVLHISALPRACKIVLSCLLI
GVVGILLISVHRDMPPASLSPAMATGLLWINLAMMGMLFGGVLMGLEGVTERLERTYRREALHDMLTGALNRRAILSIAE
RWRRAQCPFALVLLDVDHFKRFNDLHGHATGDAALCHLVNCLQQGLREGDMLGRYGGEEFMLLLPGMTRGAAMTVAERIA
ALVREQPLALPDKSLGMTVSQGIAAEDEAATLGEMIELADRRLYAAKHAGRDRVMAWDAFETLSPLPDQRIAEGAEACAF
SPPRRHDDSVIKA

Sequences:

>Translated_413_residues
MQGKVRRMTWPNAMKRDSLIMPLRLHRPWGEGGPPLPPRCPLPPERRRYFDTFAHLYGMALVAYAGLMMPLFLWLGHPWP
VGIVLASLIVTLIARGLHLRGHMAWGAGLLWAVMVVLICEAIRLYGAGVGFEFYVGLALLVLHISALPRACKIVLSCLLI
GVVGILLISVHRDMPPASLSPAMATGLLWINLAMMGMLFGGVLMGLEGVTERLERTYRREALHDMLTGALNRRAILSIAE
RWRRAQCPFALVLLDVDHFKRFNDLHGHATGDAALCHLVNCLQQGLREGDMLGRYGGEEFMLLLPGMTRGAAMTVAERIA
ALVREQPLALPDKSLGMTVSQGIAAEDEAATLGEMIELADRRLYAAKHAGRDRVMAWDAFETLSPLPDQRIAEGAEACAF
SPPRRHDDSVIKA
>Mature_413_residues
MQGKVRRMTWPNAMKRDSLIMPLRLHRPWGEGGPPLPPRCPLPPERRRYFDTFAHLYGMALVAYAGLMMPLFLWLGHPWP
VGIVLASLIVTLIARGLHLRGHMAWGAGLLWAVMVVLICEAIRLYGAGVGFEFYVGLALLVLHISALPRACKIVLSCLLI
GVVGILLISVHRDMPPASLSPAMATGLLWINLAMMGMLFGGVLMGLEGVTERLERTYRREALHDMLTGALNRRAILSIAE
RWRRAQCPFALVLLDVDHFKRFNDLHGHATGDAALCHLVNCLQQGLREGDMLGRYGGEEFMLLLPGMTRGAAMTVAERIA
ALVREQPLALPDKSLGMTVSQGIAAEDEAATLGEMIELADRRLYAAKHAGRDRVMAWDAFETLSPLPDQRIAEGAEACAF
SPPRRHDDSVIKA

Specific function: Involves in the regulation of cellulose production [H]

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI87082007, Length=206, Percent_Identity=34.9514563106796, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI87081881, Length=188, Percent_Identity=38.2978723404255, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI145693134, Length=174, Percent_Identity=33.9080459770115, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1787262, Length=173, Percent_Identity=33.5260115606936, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI1786584, Length=260, Percent_Identity=28.8461538461538, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1788381, Length=190, Percent_Identity=33.6842105263158, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI87081974, Length=199, Percent_Identity=29.6482412060301, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1787816, Length=163, Percent_Identity=31.9018404907975, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1788085, Length=165, Percent_Identity=30.9090909090909, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787802, Length=162, Percent_Identity=31.4814814814815, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1788956, Length=165, Percent_Identity=35.1515151515151, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1787056, Length=190, Percent_Identity=29.4736842105263, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787541, Length=173, Percent_Identity=28.9017341040462, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160 [H]

Pfam domain/function: PF00990 GGDEF [H]

EC number: NA

Molecular weight: Translated: 45524; Mature: 45524

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGKVRRMTWPNAMKRDSLIMPLRLHRPWGEGGPPLPPRCPLPPERRRYFDTFAHLYGMA
CCCCCCCCCCCCCCCCCCEECCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LVAYAGLMMPLFLWLGHPWPVGIVLASLIVTLIARGLHLRGHMAWGAGLLWAVMVVLICE
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHH
AIRLYGAGVGFEFYVGLALLVLHISALPRACKIVLSCLLIGVVGILLISVHRDMPPASLS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PAMATGLLWINLAMMGMLFGGVLMGLEGVTERLERTYRREALHDMLTGALNRRAILSIAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RWRRAQCPFALVLLDVDHFKRFNDLHGHATGDAALCHLVNCLQQGLREGDMLGRYGGEEF
HHHHHCCCEEEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCEE
MLLLPGMTRGAAMTVAERIAALVREQPLALPDKSLGMTVSQGIAAEDEAATLGEMIELAD
EEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHH
RRLYAAKHAGRDRVMAWDAFETLSPLPDQRIAEGAEACAFSPPRRHDDSVIKA
HHHHHHHHCCCCCEEEEHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHCCC
>Mature Secondary Structure
MQGKVRRMTWPNAMKRDSLIMPLRLHRPWGEGGPPLPPRCPLPPERRRYFDTFAHLYGMA
CCCCCCCCCCCCCCCCCCEECCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LVAYAGLMMPLFLWLGHPWPVGIVLASLIVTLIARGLHLRGHMAWGAGLLWAVMVVLICE
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHH
AIRLYGAGVGFEFYVGLALLVLHISALPRACKIVLSCLLIGVVGILLISVHRDMPPASLS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PAMATGLLWINLAMMGMLFGGVLMGLEGVTERLERTYRREALHDMLTGALNRRAILSIAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RWRRAQCPFALVLLDVDHFKRFNDLHGHATGDAALCHLVNCLQQGLREGDMLGRYGGEEF
HHHHHCCCEEEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCEE
MLLLPGMTRGAAMTVAERIAALVREQPLALPDKSLGMTVSQGIAAEDEAATLGEMIELAD
EEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHH
RRLYAAKHAGRDRVMAWDAFETLSPLPDQRIAEGAEACAFSPPRRHDDSVIKA
HHHHHHHHCCCCCEEEEHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA