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The map label for this gene is yedQ [H]

Identifier: 92112820

GI number: 92112820

Start: 770903

End: 771994

Strand: Direct

Name: yedQ [H]

Synonym: Csal_0688

Alternate gene names: 92112820

Gene position: 770903-771994 (Clockwise)

Preceding gene: 92112818

Following gene: 92112821

Centisome position: 20.85

GC content: 62.27

Gene sequence:

>1092_bases
ATGAACTCATGGGCCTGGCTACGGCTCTGGCAGTGGTCGTGCGATGCCCCGGGGGGGCTGCCGCTGGAGCGGCGACGCGG
TTACGAGGTCATGTCGCAGATCTTCTTGATCGCGAGCTTGGGACACATGGCATATGCCTGTGTCCTGATCGGCTTGCAGA
TGCCTTGGGTGACCCTCCTGAACCTGGCCTGCGTGGCGGCCAACGCGGTGGCATTGATGCTGCACCGGCGCTTGCAGCTG
AGACGCGCGATGACCGTCAAGATGACGGTCACGCTGGTGGTGCTGTCGCTGAGCATATTCGGGCTCGGCCCTGACGCCGG
GTTCGAGTATTATTTTTTCCTGCTGCTGTGCGAAATGCTGATCAGCGACATGGGGGCGCGTTACAAGGTCGCGATGAGCG
TTTCGATCGGTAGCGTCGCGGTGGCGACCCTGACGCTGGCACCGCTTGCCACTCCCTGGATGGCGGGTGGTGCTGCCTTG
CACCAGGAACTGCAGATCATCAACCTGGTGGCAGTCTTCCTGGTCCTTGGGCTGATCATGTGGCGACTGCACGTGATCAC
CGAGCGCTGCGAACATCATTTCCGGCGCGACGCCACCCATGACTATCTCACCACGGTGCTCAACCGTCGTGCCATCTTCC
ACGAAGCCGACATGCTGTGGCATCAGCAACGCCACTTCACGCTGCTGTTGCTCGACGCCGATCATTTCAAGCAGATCAAC
GACGAATACGGCCATACGGCTGGAGATGAAGTGCTGCGTCACCTGGCGAACACCCTGCGGGGTGCCTTGCGGGAGCATGA
TCGGCTGGGACGTGTCGGCGGAGAGGAGTTCCTGATCGTGCTGCCCGAAAGCGAACGCGAGGAGGTGCTCGCGGTGGCGG
CGCACATTCGGCAGTGTCTGTCGGATCGTCCCTGCCAGCTGGATACGCTGACGCTGCCCGTCACGTTTTCCATGGGGCTT
GCCGCTTCCGACGAAGCGGCCTTGCTATCCGAGGTGATCGATCTGGCCGACCGTCGCCTGTATCGCGCCAAGTCCGCTGG
CCGCGATCAGTTGGTAATGGGCGAGCTGGAGTCCGTCGAGACGACGGCCTGA

Upstream 100 bases:

>100_bases
TGGTGGCGATCCACAACGATCCTTGCCCCGATGCCGGTTCGGAGGTGGGGACATTGCGTTGCCATTGCGCAGCGCGGCGC
GGGCAGAAAGGGATATCCAA

Downstream 100 bases:

>100_bases
GCGGAACCGTGAGTCTAGTACGGATAGCCGAGCGCAACGGTGCATGCAACATGGCGTTTTGCTTATTTGGCGTTTGACGA
ATTTCATGCCGCAAAGTGGC

Product: diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MNSWAWLRLWQWSCDAPGGLPLERRRGYEVMSQIFLIASLGHMAYACVLIGLQMPWVTLLNLACVAANAVALMLHRRLQL
RRAMTVKMTVTLVVLSLSIFGLGPDAGFEYYFFLLLCEMLISDMGARYKVAMSVSIGSVAVATLTLAPLATPWMAGGAAL
HQELQIINLVAVFLVLGLIMWRLHVITERCEHHFRRDATHDYLTTVLNRRAIFHEADMLWHQQRHFTLLLLDADHFKQIN
DEYGHTAGDEVLRHLANTLRGALREHDRLGRVGGEEFLIVLPESEREEVLAVAAHIRQCLSDRPCQLDTLTLPVTFSMGL
AASDEAALLSEVIDLADRRLYRAKSAGRDQLVMGELESVETTA

Sequences:

>Translated_363_residues
MNSWAWLRLWQWSCDAPGGLPLERRRGYEVMSQIFLIASLGHMAYACVLIGLQMPWVTLLNLACVAANAVALMLHRRLQL
RRAMTVKMTVTLVVLSLSIFGLGPDAGFEYYFFLLLCEMLISDMGARYKVAMSVSIGSVAVATLTLAPLATPWMAGGAAL
HQELQIINLVAVFLVLGLIMWRLHVITERCEHHFRRDATHDYLTTVLNRRAIFHEADMLWHQQRHFTLLLLDADHFKQIN
DEYGHTAGDEVLRHLANTLRGALREHDRLGRVGGEEFLIVLPESEREEVLAVAAHIRQCLSDRPCQLDTLTLPVTFSMGL
AASDEAALLSEVIDLADRRLYRAKSAGRDQLVMGELESVETTA
>Mature_363_residues
MNSWAWLRLWQWSCDAPGGLPLERRRGYEVMSQIFLIASLGHMAYACVLIGLQMPWVTLLNLACVAANAVALMLHRRLQL
RRAMTVKMTVTLVVLSLSIFGLGPDAGFEYYFFLLLCEMLISDMGARYKVAMSVSIGSVAVATLTLAPLATPWMAGGAAL
HQELQIINLVAVFLVLGLIMWRLHVITERCEHHFRRDATHDYLTTVLNRRAIFHEADMLWHQQRHFTLLLLDADHFKQIN
DEYGHTAGDEVLRHLANTLRGALREHDRLGRVGGEEFLIVLPESEREEVLAVAAHIRQCLSDRPCQLDTLTLPVTFSMGL
AASDEAALLSEVIDLADRRLYRAKSAGRDQLVMGELESVETTA

Specific function: Involves in the regulation of cellulose production [H]

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI87082007, Length=200, Percent_Identity=37, Blast_Score=114, Evalue=9e-27,
Organism=Escherichia coli, GI1787262, Length=167, Percent_Identity=34.1317365269461, Blast_Score=105, Evalue=5e-24,
Organism=Escherichia coli, GI87081881, Length=182, Percent_Identity=37.9120879120879, Blast_Score=104, Evalue=9e-24,
Organism=Escherichia coli, GI1786584, Length=251, Percent_Identity=30.6772908366534, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1787802, Length=160, Percent_Identity=34.375, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI145693134, Length=195, Percent_Identity=32.8205128205128, Blast_Score=88, Evalue=9e-19,
Organism=Escherichia coli, GI1787816, Length=164, Percent_Identity=32.9268292682927, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788381, Length=164, Percent_Identity=33.5365853658537, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788085, Length=167, Percent_Identity=29.3413173652695, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787056, Length=152, Percent_Identity=31.5789473684211, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787541, Length=175, Percent_Identity=33.1428571428571, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1788956, Length=164, Percent_Identity=35.3658536585366, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI87081977, Length=102, Percent_Identity=35.2941176470588, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI87081974, Length=357, Percent_Identity=23.249299719888, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160 [H]

Pfam domain/function: PF00990 GGDEF [H]

EC number: NA

Molecular weight: Translated: 40770; Mature: 40770

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSWAWLRLWQWSCDAPGGLPLERRRGYEVMSQIFLIASLGHMAYACVLIGLQMPWVTLL
CCCCEEEEEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
NLACVAANAVALMLHRRLQLRRAMTVKMTVTLVVLSLSIFGLGPDAGFEYYFFLLLCEML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
ISDMGARYKVAMSVSIGSVAVATLTLAPLATPWMAGGAALHQELQIINLVAVFLVLGLIM
HHCCCCCEEEEEEEEHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHH
WRLHVITERCEHHFRRDATHDYLTTVLNRRAIFHEADMLWHQQRHFTLLLLDADHFKQIN
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
DEYGHTAGDEVLRHLANTLRGALREHDRLGRVGGEEFLIVLPESEREEVLAVAAHIRQCL
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHH
SDRPCQLDTLTLPVTFSMGLAASDEAALLSEVIDLADRRLYRAKSAGRDQLVMGELESVE
CCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
TTA
CCC
>Mature Secondary Structure
MNSWAWLRLWQWSCDAPGGLPLERRRGYEVMSQIFLIASLGHMAYACVLIGLQMPWVTLL
CCCCEEEEEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
NLACVAANAVALMLHRRLQLRRAMTVKMTVTLVVLSLSIFGLGPDAGFEYYFFLLLCEML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
ISDMGARYKVAMSVSIGSVAVATLTLAPLATPWMAGGAALHQELQIINLVAVFLVLGLIM
HHCCCCCEEEEEEEEHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHH
WRLHVITERCEHHFRRDATHDYLTTVLNRRAIFHEADMLWHQQRHFTLLLLDADHFKQIN
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
DEYGHTAGDEVLRHLANTLRGALREHDRLGRVGGEEFLIVLPESEREEVLAVAAHIRQCL
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHH
SDRPCQLDTLTLPVTFSMGLAASDEAALLSEVIDLADRRLYRAKSAGRDQLVMGELESVE
CCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
TTA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA