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The map label for this gene is ycjP [C]

Identifier: 92112768

GI number: 92112768

Start: 712895

End: 713716

Strand: Direct

Name: ycjP [C]

Synonym: Csal_0635

Alternate gene names: 92112768

Gene position: 712895-713716 (Clockwise)

Preceding gene: 92112767

Following gene: 92112769

Centisome position: 19.28

GC content: 61.44

Gene sequence:

>822_bases
ATGAATCCTACGATGACCAAGAAACTGCTGCTCACGCTGCTCGCCTGGGGCATCGCGTTGATCGTGTTCTTTCCGATCTT
CTGGATGGTGCTGACCGGCTTCAAGACCGAAGGCGAGGCCGTGGCGACACCGCCGAGCCTGTTCTTCGAGCCGACCCTGG
CGGGCTATCACGAAGTCATGGCGCGTGCCGACTACTTGAAGTTCGCCCTGAACAGCATCGTGATCTCGTTCGGCTCGACC
CTGCTGGCGCTGATCGTGGCGATTCCCTCGGCCTATTCGATGGCCTTCCTGCCGACCAAGCGTACCCGGGGCACGTTGCT
GTGGATGCTGTCCACCAAGATGCTGCCGCCGGTCGGCGTGCTGATGCCGGTGTACCTGCTGTTCCGCGACATGGGCCTGC
TCGACTCCCAGCTCGGTCTGACCATCGTCTACATGCTGATGAACCTGCCGATCGTGGTGTGGATGCTGTACACCTTCTTC
AAGGACATTCCCAAGGACATCCTCGAAGCAGGACGCATGGACGGCGCCGGCACCCTGCAGGAAGTGCTCTACCTGCTGTT
GCCGCTGACCCTGCCGGGGATCGCGTCCACCGGATTGCTGTCGGTCATCCTGAGCTGGAACGAGGCGTTCTGGAGCCTCA
ACCTGACGACCTCGGATGCCGCCCCGCTGACCGCTTTCATCGCTTCCTTCTCGAGTCCCGAAGGGCTGTTCTGGGCCAAG
TTGTCCGCCGCCTCGACGCTGGCCATCGCGCCGATTCTGATCTTCGGCTGGTTGACCCAGAAGCAGATGGTTCGTGGTCT
CACCTTCGGCGCCGTCAAATAA

Upstream 100 bases:

>100_bases
GGCCGGCGGTGTCATCGCCATCATCCTGGCCAACATCGTGGCGATCTTCTTGATCCGCACCGTGGCCAAGAATCTCGAGA
CCTGAGGCGAGGAGCACTGC

Downstream 100 bases:

>100_bases
GGAATTCCGCCATGGCAACGCTACAACTCAACGACATCGTCAAGGACTTCGGCGGCACCCAGGTCATCAAGGGCGTCGAC
CTCGAGGTCAAGGACCGCGA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MNPTMTKKLLLTLLAWGIALIVFFPIFWMVLTGFKTEGEAVATPPSLFFEPTLAGYHEVMARADYLKFALNSIVISFGST
LLALIVAIPSAYSMAFLPTKRTRGTLLWMLSTKMLPPVGVLMPVYLLFRDMGLLDSQLGLTIVYMLMNLPIVVWMLYTFF
KDIPKDILEAGRMDGAGTLQEVLYLLLPLTLPGIASTGLLSVILSWNEAFWSLNLTTSDAAPLTAFIASFSSPEGLFWAK
LSAASTLAIAPILIFGWLTQKQMVRGLTFGAVK

Sequences:

>Translated_273_residues
MNPTMTKKLLLTLLAWGIALIVFFPIFWMVLTGFKTEGEAVATPPSLFFEPTLAGYHEVMARADYLKFALNSIVISFGST
LLALIVAIPSAYSMAFLPTKRTRGTLLWMLSTKMLPPVGVLMPVYLLFRDMGLLDSQLGLTIVYMLMNLPIVVWMLYTFF
KDIPKDILEAGRMDGAGTLQEVLYLLLPLTLPGIASTGLLSVILSWNEAFWSLNLTTSDAAPLTAFIASFSSPEGLFWAK
LSAASTLAIAPILIFGWLTQKQMVRGLTFGAVK
>Mature_273_residues
MNPTMTKKLLLTLLAWGIALIVFFPIFWMVLTGFKTEGEAVATPPSLFFEPTLAGYHEVMARADYLKFALNSIVISFGST
LLALIVAIPSAYSMAFLPTKRTRGTLLWMLSTKMLPPVGVLMPVYLLFRDMGLLDSQLGLTIVYMLMNLPIVVWMLYTFF
KDIPKDILEAGRMDGAGTLQEVLYLLLPLTLPGIASTGLLSVILSWNEAFWSLNLTTSDAAPLTAFIASFSSPEGLFWAK
LSAASTLAIAPILIFGWLTQKQMVRGLTFGAVK

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=262, Percent_Identity=29.3893129770992, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1789860, Length=268, Percent_Identity=26.865671641791, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1790464, Length=210, Percent_Identity=29.0476190476191, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30015; Mature: 30015

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPTMTKKLLLTLLAWGIALIVFFPIFWMVLTGFKTEGEAVATPPSLFFEPTLAGYHEVM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHHHH
ARADYLKFALNSIVISFGSTLLALIVAIPSAYSMAFLPTKRTRGTLLWMLSTKMLPPVGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCEEEEEHHCCCCCHHH
LMPVYLLFRDMGLLDSQLGLTIVYMLMNLPIVVWMLYTFFKDIPKDILEAGRMDGAGTLQ
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
EVLYLLLPLTLPGIASTGLLSVILSWNEAFWSLNLTTSDAAPLTAFIASFSSPEGLFWAK
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHCCCCCCEEEEH
LSAASTLAIAPILIFGWLTQKQMVRGLTFGAVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNPTMTKKLLLTLLAWGIALIVFFPIFWMVLTGFKTEGEAVATPPSLFFEPTLAGYHEVM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHHHH
ARADYLKFALNSIVISFGSTLLALIVAIPSAYSMAFLPTKRTRGTLLWMLSTKMLPPVGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCEEEEEHHCCCCCHHH
LMPVYLLFRDMGLLDSQLGLTIVYMLMNLPIVVWMLYTFFKDIPKDILEAGRMDGAGTLQ
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
EVLYLLLPLTLPGIASTGLLSVILSWNEAFWSLNLTTSDAAPLTAFIASFSSPEGLFWAK
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHCCCCCCEEEEH
LSAASTLAIAPILIFGWLTQKQMVRGLTFGAVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]