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The map label for this gene is ycjN [C]

Identifier: 92112766

GI number: 92112766

Start: 710603

End: 711913

Strand: Direct

Name: ycjN [C]

Synonym: Csal_0633

Alternate gene names: 92112766

Gene position: 710603-711913 (Clockwise)

Preceding gene: 92112765

Following gene: 92112767

Centisome position: 19.22

GC content: 63.16

Gene sequence:

>1311_bases
ATGCGCCTTACCTACGCTCTACCCCTGGCCGGAGCCGCGACACTGGCTTCGTTCGCCGCTCACGCCGAGACCATCACCGT
GGCCACGGTGAACAACAACGACATGATCATCATGCAGGGCCTGACCGACGAATTCGAAAAGGCTCACCCGGACATCGACC
TGGAATGGGTGGTGCTCGAGGAAAACGTGTTGCGTCAGCGTCTGACCACCGACATCGCCACCGACGGCGGCCAGTTCGAT
GTCATGACCATCGGGACGTACGAGGTGCCGATCTGGGCCAAGCAGGATTGGCTGGTCGAGCTCGACGACCTGCCCGAGAG
CTACAACGAGCAGGATCTGCTCAAGCCGATCCGCGACGGCCTGAGCCAGGACGGTTCGCTCTATGCGCTGCCGTTCTACG
GTGAAAGCTCGATGATGTACTACCGCACCGACCTGTTCGAGCAGGCCGGCATCGAGATGCCCGAACAGCCGACCTGGGAG
CAGGTCGAGGACTGGGCGAGCCAGATCAACGATCCCGACAACGGCGTGTATGGCATCTGCCTGCGTGGCAAGCCGGGCTG
GGGCGAGAACATGGCGTTCGTCAGCACCCTGGTCAATACCTTCGGCGGTCGCTGGTTCGACGAGGAATGGCATCCGGAAA
TCAACTCGCCGGAGTGGAAGGAAGCGGTCGGTTTCTATGTCGACCTGATGAACAACTATGGCCCGCCGGGTGCGACCTCC
AACGGCTTCAACGAGAATCAGGCGCTGTTCTCCAGCGGCAAGTGCGGCATGTGGGTCGATGCCACGTCCGCTGCCGGACG
TCTCTACAATCCCGACGAGTCGCAGGTCGCCGACAAGCTCGGCTTCGCCCCGGCGCCGATCGCCGAGACCCCGAAGGGCG
CCAACTGGCTGTGGTCGTGGACGCTGGCGATTCCCGCCTCGTCGGATGCCAAGGACGCCGCCAGGACCTTCATTACCTGG
GCGACCTCGCAGGACTACATCGAGCTGGTAGGGGAAACCGAAGGCTGGACCAGTGTGCCGCCGGGCACCCGTGAGTCCAC
CTACGAGAATCCCAAGTACCAGGAAGCTGCGCCGTTCGCCGACTTCGTGCTCAACGCCATCCAGACCGCCGATCCCACCG
ATTCGACGCTCAAGCCGAGTCCCTACATCGGCGTGCAGACCGTCAACATCCCCGAGTTCCAGGCGGTAGGCACCCAGGTG
GGACAGATGATCGGGGCTGCACTTGCCGGTCAACAGTCCGTCGATGCCGCGCTCGACCAGGCCCAGCGTTCGGTCGATCG
CACCATGCGCCAGGCGGGATACTACGACTAA

Upstream 100 bases:

>100_bases
GTGAGGGGTTTGCTTTTTTTGGCGCTGCAAATGATCATTTGAATACTCGATGAGTAGATTGATCAAAACAAATTCAATGA
TCTTCTCCCAGGAGCACGCC

Downstream 100 bases:

>100_bases
GCGATAGCCTCCCGCCGCGGCCGGATCGTCATGATCCGGCCGCCTTTTCCGACCTGTTTCCTTCAATGGGGCATTCCCAT
GCGCGAGAGAACGTCCGGAC

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MRLTYALPLAGAATLASFAAHAETITVATVNNNDMIIMQGLTDEFEKAHPDIDLEWVVLEENVLRQRLTTDIATDGGQFD
VMTIGTYEVPIWAKQDWLVELDDLPESYNEQDLLKPIRDGLSQDGSLYALPFYGESSMMYYRTDLFEQAGIEMPEQPTWE
QVEDWASQINDPDNGVYGICLRGKPGWGENMAFVSTLVNTFGGRWFDEEWHPEINSPEWKEAVGFYVDLMNNYGPPGATS
NGFNENQALFSSGKCGMWVDATSAAGRLYNPDESQVADKLGFAPAPIAETPKGANWLWSWTLAIPASSDAKDAARTFITW
ATSQDYIELVGETEGWTSVPPGTRESTYENPKYQEAAPFADFVLNAIQTADPTDSTLKPSPYIGVQTVNIPEFQAVGTQV
GQMIGAALAGQQSVDAALDQAQRSVDRTMRQAGYYD

Sequences:

>Translated_436_residues
MRLTYALPLAGAATLASFAAHAETITVATVNNNDMIIMQGLTDEFEKAHPDIDLEWVVLEENVLRQRLTTDIATDGGQFD
VMTIGTYEVPIWAKQDWLVELDDLPESYNEQDLLKPIRDGLSQDGSLYALPFYGESSMMYYRTDLFEQAGIEMPEQPTWE
QVEDWASQINDPDNGVYGICLRGKPGWGENMAFVSTLVNTFGGRWFDEEWHPEINSPEWKEAVGFYVDLMNNYGPPGATS
NGFNENQALFSSGKCGMWVDATSAAGRLYNPDESQVADKLGFAPAPIAETPKGANWLWSWTLAIPASSDAKDAARTFITW
ATSQDYIELVGETEGWTSVPPGTRESTYENPKYQEAAPFADFVLNAIQTADPTDSTLKPSPYIGVQTVNIPEFQAVGTQV
GQMIGAALAGQQSVDAALDQAQRSVDRTMRQAGYYD
>Mature_436_residues
MRLTYALPLAGAATLASFAAHAETITVATVNNNDMIIMQGLTDEFEKAHPDIDLEWVVLEENVLRQRLTTDIATDGGQFD
VMTIGTYEVPIWAKQDWLVELDDLPESYNEQDLLKPIRDGLSQDGSLYALPFYGESSMMYYRTDLFEQAGIEMPEQPTWE
QVEDWASQINDPDNGVYGICLRGKPGWGENMAFVSTLVNTFGGRWFDEEWHPEINSPEWKEAVGFYVDLMNNYGPPGATS
NGFNENQALFSSGKCGMWVDATSAAGRLYNPDESQVADKLGFAPAPIAETPKGANWLWSWTLAIPASSDAKDAARTFITW
ATSQDYIELVGETEGWTSVPPGTRESTYENPKYQEAAPFADFVLNAIQTADPTDSTLKPSPYIGVQTVNIPEFQAVGTQV
GQMIGAALAGQQSVDAALDQAQRSVDRTMRQAGYYD

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1787569, Length=429, Percent_Identity=22.3776223776224, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 48151; Mature: 48151

Theoretical pI: Translated: 3.87; Mature: 3.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTYALPLAGAATLASFAAHAETITVATVNNNDMIIMQGLTDEFEKAHPDIDLEWVVLE
CEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCCEEEECCCCHHHHHHCCCCCEEEEEEC
ENVLRQRLTTDIATDGGQFDVMTIGTYEVPIWAKQDWLVELDDLPESYNEQDLLKPIRDG
HHHHHHHHHHHHCCCCCCEEEEEECEEECCEEECCCCEEEECCCCCCCCHHHHHHHHHHH
LSQDGSLYALPFYGESSMMYYRTDLFEQAGIEMPEQPTWEQVEDWASQINDPDNGVYGIC
HCCCCCEEEEEEECCCCEEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEE
LRGKPGWGENMAFVSTLVNTFGGRWFDEEWHPEINSPEWKEAVGFYVDLMNNYGPPGATS
EECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
NGFNENQALFSSGKCGMWVDATSAAGRLYNPDESQVADKLGFAPAPIAETPKGANWLWSW
CCCCCCCHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEE
TLAIPASSDAKDAARTFITWATSQDYIELVGETEGWTSVPPGTRESTYENPKYQEAAPFA
EEEECCCCCHHHHHHEEEEECCCCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
DFVLNAIQTADPTDSTLKPSPYIGVQTVNIPEFQAVGTQVGQMIGAALAGQQSVDAALDQ
HHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
AQRSVDRTMRQAGYYD
HHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRLTYALPLAGAATLASFAAHAETITVATVNNNDMIIMQGLTDEFEKAHPDIDLEWVVLE
CEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCCEEEECCCCHHHHHHCCCCCEEEEEEC
ENVLRQRLTTDIATDGGQFDVMTIGTYEVPIWAKQDWLVELDDLPESYNEQDLLKPIRDG
HHHHHHHHHHHHCCCCCCEEEEEECEEECCEEECCCCEEEECCCCCCCCHHHHHHHHHHH
LSQDGSLYALPFYGESSMMYYRTDLFEQAGIEMPEQPTWEQVEDWASQINDPDNGVYGIC
HCCCCCEEEEEEECCCCEEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEE
LRGKPGWGENMAFVSTLVNTFGGRWFDEEWHPEINSPEWKEAVGFYVDLMNNYGPPGATS
EECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
NGFNENQALFSSGKCGMWVDATSAAGRLYNPDESQVADKLGFAPAPIAETPKGANWLWSW
CCCCCCCHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEE
TLAIPASSDAKDAARTFITWATSQDYIELVGETEGWTSVPPGTRESTYENPKYQEAAPFA
EEEECCCCCHHHHHHEEEEECCCCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
DFVLNAIQTADPTDSTLKPSPYIGVQTVNIPEFQAVGTQVGQMIGAALAGQQSVDAALDQ
HHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
AQRSVDRTMRQAGYYD
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]