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The map label for this gene is qseB [H]

Identifier: 92112763

GI number: 92112763

Start: 707347

End: 708018

Strand: Direct

Name: qseB [H]

Synonym: Csal_0630

Alternate gene names: 92112763

Gene position: 707347-708018 (Clockwise)

Preceding gene: 92112762

Following gene: 92112764

Centisome position: 19.13

GC content: 66.07

Gene sequence:

>672_bases
ATGAAGGTATTGCTGGTCGAGGATGATACCGCGCTGGCGCAAGCCCTCGGCGAAGCCTTCGTCGAGGCCGGACTGCTGTG
GGAGCATGCCGCGAACGGCGAAGCAGCCGATTATCTGGTGCGCGTGGAAGCCTACGATGCCGTGATTCTCGATCTGGGCC
TTCCCGATGGCGATGGCACCCGCTGGCTCGCCGCGTGGCGCGAAGACGGCATCGATCTGCCGGTGCTGGTACTGACGGCG
CGCGAGCGCTGGTCGGACAAGGCGGCCGGCTTCTCCGCCGGGGCCGACGATTACGTCACCAAGCCCTTCGAGACGGCAGA
AGTCCTGTTCCGTCTGCGTGCCCTGGTACGACGCAGCCACGGGCATGCGCATCCGATCCTCAAGCTCGGCGAGCTGGCAC
TGGATACGCATACCGGCAGTGTCACCCTGGCAGGCCGTCCGATCACGCTGACGGCCCAGGAATCGCGCCTGCTGGCGTAT
CTGCTGCATGCCGCCCCGCGCATCGTGACCCGCACCGAGCTTTCGGAGCATGTCTATGACCGGGACCACGAGCCCGACTC
CAACGTCATCGATGTCCAGATCAGCCGCCTGCGTCGCAAGCTGGGCAACCAGCGCATCGAGACCCTGCGCGGCCAGGGCT
ATCGTCTGGTGGCGCTCGAGGAGACGCCATGA

Upstream 100 bases:

>100_bases
TGATCGGCCCGCAGGGGCAGGTGGTCGAATTTGAATTCGATGCCGCCAATGGCGAGCTGATCGGCATCGAAGGGGTCAAT
ATCGAGGGGATGACGCGTCC

Downstream 100 bases:

>100_bases
GGCGACGCGCCTGGCAACAGCGCATCGCGCGTACCTCGATCCGGGCTCGGTTGCTGATCGCCTCGCTGTTGCTGGTCATG
GTCGCGTTGCCACTGGCCGG

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MKVLLVEDDTALAQALGEAFVEAGLLWEHAANGEAADYLVRVEAYDAVILDLGLPDGDGTRWLAAWREDGIDLPVLVLTA
RERWSDKAAGFSAGADDYVTKPFETAEVLFRLRALVRRSHGHAHPILKLGELALDTHTGSVTLAGRPITLTAQESRLLAY
LLHAAPRIVTRTELSEHVYDRDHEPDSNVIDVQISRLRRKLGNQRIETLRGQGYRLVALEETP

Sequences:

>Translated_223_residues
MKVLLVEDDTALAQALGEAFVEAGLLWEHAANGEAADYLVRVEAYDAVILDLGLPDGDGTRWLAAWREDGIDLPVLVLTA
RERWSDKAAGFSAGADDYVTKPFETAEVLFRLRALVRRSHGHAHPILKLGELALDTHTGSVTLAGRPITLTAQESRLLAY
LLHAAPRIVTRTELSEHVYDRDHEPDSNVIDVQISRLRRKLGNQRIETLRGQGYRLVALEETP
>Mature_223_residues
MKVLLVEDDTALAQALGEAFVEAGLLWEHAANGEAADYLVRVEAYDAVILDLGLPDGDGTRWLAAWREDGIDLPVLVLTA
RERWSDKAAGFSAGADDYVTKPFETAEVLFRLRALVRRSHGHAHPILKLGELALDTHTGSVTLAGRPITLTAQESRLLAY
LLHAAPRIVTRTELSEHVYDRDHEPDSNVIDVQISRLRRKLGNQRIETLRGQGYRLVALEETP

Specific function: Member of a two-component regulatory system qseB/qseC [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1790552, Length=222, Percent_Identity=42.3423423423423, Blast_Score=160, Evalue=6e-41,
Organism=Escherichia coli, GI1789402, Length=216, Percent_Identity=40.7407407407407, Blast_Score=154, Evalue=4e-39,
Organism=Escherichia coli, GI1787375, Length=218, Percent_Identity=39.4495412844037, Blast_Score=151, Evalue=4e-38,
Organism=Escherichia coli, GI1786784, Length=223, Percent_Identity=36.7713004484305, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI87082012, Length=225, Percent_Identity=34.6666666666667, Blast_Score=127, Evalue=6e-31,
Organism=Escherichia coli, GI1786599, Length=222, Percent_Identity=29.7297297297297, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI1789809, Length=228, Percent_Identity=31.140350877193, Blast_Score=107, Evalue=7e-25,
Organism=Escherichia coli, GI1790860, Length=224, Percent_Identity=33.4821428571429, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI2367329, Length=230, Percent_Identity=33.4782608695652, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1786911, Length=223, Percent_Identity=33.1838565022422, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1788394, Length=221, Percent_Identity=30.7692307692308, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI1787229, Length=224, Percent_Identity=29.4642857142857, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1790863, Length=230, Percent_Identity=26.9565217391304, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 24704; Mature: 24704

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLLVEDDTALAQALGEAFVEAGLLWEHAANGEAADYLVRVEAYDAVILDLGLPDGDGT
CEEEEEECCHHHHHHHHHHHHHHHHHEECCCCCCCHHEEEEEEECCEEEEEECCCCCCCC
RWLAAWREDGIDLPVLVLTARERWSDKAAGFSAGADDYVTKPFETAEVLFRLRALVRRSH
EEEEEHHCCCCCCEEEEEECCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
GHAHPILKLGELALDTHTGSVTLAGRPITLTAQESRLLAYLLHAAPRIVTRTELSEHVYD
CCCCHHHHHHHEEEECCCCEEEECCCCEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHC
RDHEPDSNVIDVQISRLRRKLGNQRIETLRGQGYRLVALEETP
CCCCCCCCEEHHHHHHHHHHHCHHHHHHHCCCCEEEEEEECCC
>Mature Secondary Structure
MKVLLVEDDTALAQALGEAFVEAGLLWEHAANGEAADYLVRVEAYDAVILDLGLPDGDGT
CEEEEEECCHHHHHHHHHHHHHHHHHEECCCCCCCHHEEEEEEECCEEEEEECCCCCCCC
RWLAAWREDGIDLPVLVLTARERWSDKAAGFSAGADDYVTKPFETAEVLFRLRALVRRSH
EEEEEHHCCCCCCEEEEEECCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
GHAHPILKLGELALDTHTGSVTLAGRPITLTAQESRLLAYLLHAAPRIVTRTELSEHVYD
CCCCHHHHHHHEEEECCCCEEEECCCCEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHC
RDHEPDSNVIDVQISRLRRKLGNQRIETLRGQGYRLVALEETP
CCCCCCCCEEHHHHHHHHHHHCHHHHHHHCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]