| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is yaeL [C]
Identifier: 92112703
GI number: 92112703
Start: 631621
End: 632976
Strand: Direct
Name: yaeL [C]
Synonym: Csal_0570
Alternate gene names: 92112703
Gene position: 631621-632976 (Clockwise)
Preceding gene: 92112702
Following gene: 92112704
Centisome position: 17.09
GC content: 66.74
Gene sequence:
>1356_bases ATGGGCGTGATTGAGAACCTGCTGGCGGTCATCGTGGTTCTGGGATTGTTGATCACCTTCCACGAGTTCGGCCATTTCTG GGTCGCGCGGCGTTGCGGCGTCAAGGTGCTGCGTTTCTCGGTGGGGTTCGGCAAGCCGTTATGGTCGCGGTTCGATCGCC ACGGCACGGAATTCGCCGTGGCCGCGATTCCGCTCGGCGGCTATGTCAAGATGCTCGATGAGCGCGAGGGGCCGGTGGCG CCGGAAGAGCAGGCGCATGCCTTCAACCGCAAGAGCGTATGGGCCAGGATCGCCATCGTCTCGGCCGGCCCGCTGGCAAA TTTTCTGCTCGCCTTCGTCGCTTACTGGGCCCTGTTCATCTACGGCACGGCCACGGTGGCGCCGGTGATCGGCGATGTCA CGCCGGATTCGCCGGCCGCTCAGGGCGGTTTGCAGCGCGGCCAGGAAATCGTGGCCGTGCAGGGCGAGCCGACCCCGTCG TGGGGCGAGGTCAACCTCAAGCTGGTGGCGGCCATCGGCGCCGATGGCACCCTCGACGTGACCACGCGGACGTCAGAGGG CGCCACGCCGACGCAGCATCGGGTGCCGGTCAACGACTGGCTGGTACGCCAGAATCCGCCTCAGCCGCTGGCATCGCTGG GCGTGACGCCCTGGCGTCCCGAGCTGCCGGCGGTCCTCGGTGAGGTGCTGGATGACGGTCGCGCGCATCAGGCGGGGCTG CAACGCGGGGATCGTATCGTCAGTGTCGATGGTGTGGCCGTCGACGACTGGATGGCGTTCGTCGAGCGTGTGCGCGCCAA TCCGGAGACGCCCTTGACCCTGCAGGTGACGCGCGATGGCGAGCGCCGCGAGATCACGCTGACGCCCGCCGTGCGCGAAC AGGAAGATGGCTCGACCATCGGTTATATCGGGGCCGGCGTGCAGCCGTCCGAATGGCCCGAGCGCTACCGTCGCGAGATT CGCTACGGCCCACTGGACGCCGTCGGCGAGGCGGTCGCCAAGACAGGGGAGATGAGCCTGCTCACGCTGGACTCGATCCG CAAGATGCTGGTGGGGCTGATTTCCCCCTCCAACCTCTCGGGGCCCGTGACCATCGCCCGCATTGCGGGGGATTCCGCAC GCGATGGCGTGGAGAGCTTCATCAGCTTCCTGGCGTATCTGTCGATCAGCCTGGGGGTGCTCAATCTGTTGCCGATCCCC GTGCTCGATGGCGGGCATCTGGTCTACTACATCATCGAGGCTGTGCGCGGGCGCCCGGTGCCCGAGGCCGTGCAGGCCTT CGGTCTGCGTGTGGGCATCGCGCTGGTGGGCTCGTTGATGCTGATGGCGTTGTACTTCGACCTGATGCGTCTGTAG
Upstream 100 bases:
>100_bases GCGGCTGACGCCACCGCGCGGCGTGTCGCCGAGCGCGAATTGAGCCGGTTCACGTCATGATGTCAGGGCGGTGGCCCGCG CGAGGAAGGAGGACGGTCCC
Downstream 100 bases:
>100_bases CCCTCATTGCGGGGCGGCCCTCGGCCGGGCTTTAATGTGGGCCGACGATGGCCTGGGTAAGCGGTCGTTGACCGCAAGGA TGAGCGACCCGGGGGAACGT
Product: peptidase M50 membrane-associated zinc metallopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MGVIENLLAVIVVLGLLITFHEFGHFWVARRCGVKVLRFSVGFGKPLWSRFDRHGTEFAVAAIPLGGYVKMLDEREGPVA PEEQAHAFNRKSVWARIAIVSAGPLANFLLAFVAYWALFIYGTATVAPVIGDVTPDSPAAQGGLQRGQEIVAVQGEPTPS WGEVNLKLVAAIGADGTLDVTTRTSEGATPTQHRVPVNDWLVRQNPPQPLASLGVTPWRPELPAVLGEVLDDGRAHQAGL QRGDRIVSVDGVAVDDWMAFVERVRANPETPLTLQVTRDGERREITLTPAVREQEDGSTIGYIGAGVQPSEWPERYRREI RYGPLDAVGEAVAKTGEMSLLTLDSIRKMLVGLISPSNLSGPVTIARIAGDSARDGVESFISFLAYLSISLGVLNLLPIP VLDGGHLVYYIIEAVRGRPVPEAVQAFGLRVGIALVGSLMLMALYFDLMRL
Sequences:
>Translated_451_residues MGVIENLLAVIVVLGLLITFHEFGHFWVARRCGVKVLRFSVGFGKPLWSRFDRHGTEFAVAAIPLGGYVKMLDEREGPVA PEEQAHAFNRKSVWARIAIVSAGPLANFLLAFVAYWALFIYGTATVAPVIGDVTPDSPAAQGGLQRGQEIVAVQGEPTPS WGEVNLKLVAAIGADGTLDVTTRTSEGATPTQHRVPVNDWLVRQNPPQPLASLGVTPWRPELPAVLGEVLDDGRAHQAGL QRGDRIVSVDGVAVDDWMAFVERVRANPETPLTLQVTRDGERREITLTPAVREQEDGSTIGYIGAGVQPSEWPERYRREI RYGPLDAVGEAVAKTGEMSLLTLDSIRKMLVGLISPSNLSGPVTIARIAGDSARDGVESFISFLAYLSISLGVLNLLPIP VLDGGHLVYYIIEAVRGRPVPEAVQAFGLRVGIALVGSLMLMALYFDLMRL >Mature_450_residues GVIENLLAVIVVLGLLITFHEFGHFWVARRCGVKVLRFSVGFGKPLWSRFDRHGTEFAVAAIPLGGYVKMLDEREGPVAP EEQAHAFNRKSVWARIAIVSAGPLANFLLAFVAYWALFIYGTATVAPVIGDVTPDSPAAQGGLQRGQEIVAVQGEPTPSW GEVNLKLVAAIGADGTLDVTTRTSEGATPTQHRVPVNDWLVRQNPPQPLASLGVTPWRPELPAVLGEVLDDGRAHQAGLQ RGDRIVSVDGVAVDDWMAFVERVRANPETPLTLQVTRDGERREITLTPAVREQEDGSTIGYIGAGVQPSEWPERYRREIR YGPLDAVGEAVAKTGEMSLLTLDSIRKMLVGLISPSNLSGPVTIARIAGDSARDGVESFISFLAYLSISLGVLNLLPIPV LDGGHLVYYIIEAVRGRPVPEAVQAFGLRVGIALVGSLMLMALYFDLMRL
Specific function: Unknown
COG id: COG0750
COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PDZ (DHR) domain [H]
Homologues:
Organism=Escherichia coli, GI1786373, Length=446, Percent_Identity=45.7399103139013, Blast_Score=374, Evalue=1e-105,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001478 - InterPro: IPR004387 - InterPro: IPR008915 [H]
Pfam domain/function: PF00595 PDZ; PF02163 Peptidase_M50 [H]
EC number: NA
Molecular weight: Translated: 48776; Mature: 48645
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVIENLLAVIVVLGLLITFHEFGHFWVARRCGVKVLRFSVGFGKPLWSRFDRHGTEFAV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHCCCCEEEE AAIPLGGYVKMLDEREGPVAPEEQAHAFNRKSVWARIAIVSAGPLANFLLAFVAYWALFI EEECCCHHHHHHHCCCCCCCCHHHHHHCCCHHHEEEEEEEECCHHHHHHHHHHHHHHHHH YGTATVAPVIGDVTPDSPAAQGGLQRGQEIVAVQGEPTPSWGEVNLKLVAAIGADGTLDV HHHHHHHHHHCCCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEEECCCCEEEE TTRTSEGATPTQHRVPVNDWLVRQNPPQPLASLGVTPWRPELPAVLGEVLDDGRAHQAGL EECCCCCCCCCCCCCCHHHHHCCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHH QRGDRIVSVDGVAVDDWMAFVERVRANPETPLTLQVTRDGERREITLTPAVREQEDGSTI HCCCEEEEECCEEHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCEE GYIGAGVQPSEWPERYRREIRYGPLDAVGEAVAKTGEMSLLTLDSIRKMLVGLISPSNLS EEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCCCC GPVTIARIAGDSARDGVESFISFLAYLSISLGVLNLLPIPVLDGGHLVYYIIEAVRGRPV CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHCCCCC PEAVQAFGLRVGIALVGSLMLMALYFDLMRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GVIENLLAVIVVLGLLITFHEFGHFWVARRCGVKVLRFSVGFGKPLWSRFDRHGTEFAV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHCCCCEEEE AAIPLGGYVKMLDEREGPVAPEEQAHAFNRKSVWARIAIVSAGPLANFLLAFVAYWALFI EEECCCHHHHHHHCCCCCCCCHHHHHHCCCHHHEEEEEEEECCHHHHHHHHHHHHHHHHH YGTATVAPVIGDVTPDSPAAQGGLQRGQEIVAVQGEPTPSWGEVNLKLVAAIGADGTLDV HHHHHHHHHHCCCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEEECCCCEEEE TTRTSEGATPTQHRVPVNDWLVRQNPPQPLASLGVTPWRPELPAVLGEVLDDGRAHQAGL EECCCCCCCCCCCCCCHHHHHCCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHH QRGDRIVSVDGVAVDDWMAFVERVRANPETPLTLQVTRDGERREITLTPAVREQEDGSTI HCCCEEEEECCEEHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCEE GYIGAGVQPSEWPERYRREIRYGPLDAVGEAVAKTGEMSLLTLDSIRKMLVGLISPSNLS EEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCCCC GPVTIARIAGDSARDGVESFISFLAYLSISLGVLNLLPIPVLDGGHLVYYIIEAVRGRPV CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHCCCCC PEAVQAFGLRVGIALVGSLMLMALYFDLMRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]