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The map label for this gene is glxA [H]

Identifier: 92112674

GI number: 92112674

Start: 599676

End: 600701

Strand: Direct

Name: glxA [H]

Synonym: Csal_0541

Alternate gene names: 92112674

Gene position: 599676-600701 (Clockwise)

Preceding gene: 92112662

Following gene: 92112675

Centisome position: 16.22

GC content: 68.52

Gene sequence:

>1026_bases
ATGATTTTCGCCATGAGTGAGCTCTCGACCACCGACTGGCCCTATCCACGCCCCGAGCAACCACCGGTCCCTCGGCCCGG
AGAAGCGGCGCATACCGTGGATGTCTGGGTCGTGCCCAATTTCTCGATGCTGACATTGTTCTGCCTGCTCGAACCGCTGC
GCGTGGCCAATCGGTTCGGGCGCACGCTCTTCGCATGGCGGTTGTTGTCGGCGGACGGCGAGGCGGTGGTGGCCAGCAAC
GGGGTGCGCATCGAGGTGGACGGCCCCCTGGATGCGCATTGCCACGGCGAGCTGCTGATGGTGATCTCGTCCTATCAGCC
GGAAGTCAGCGTGACCAGCGCCGAGCGCGCGGTGCTGCGCCACGTCGCGGCCCATGGCGGGCGTGTCGGCGGCCTCGATA
CGGCGCCTTTCATCCTGGCGCGGGCAGGGCTGCTCGATCATCATCGCGTGGCACTGCACTGGGAGAGCGTGCCGGCGTTC
CGGGCGGAGTTTCCCCACATCGCCGTCAGCGAGGCGCGCTTCGAGTTCGCCGGACAGCGCCTGACCGGCTCGGGCGGGGC
GGCAGGCATCGACATGATGCTGCAATGGATCGAGCACGATTACGGGCCGGCGCTGGCCAATGCCGTGGGACGTCAGCTGG
TGCACCAGCGCGTCTCCGAAGAAGAGGCCTGGAAGGCCGGCGCCGCGCGTACCCTGGAGGACTTGCCGCGTAGCGTGGTG
CGGGCGCTGGCGGTGATGGAGGCCCACCTCGACCAGGTACTGCCGATGCCCGAGATCTGCCGCCTGGCGGGACAGTCGCA
GCGTCAGCTGACGCGCCTCTTCGTGGCACATTTCGGAGAAACCCCCAAGCAGTGCTACCTGGGCATGCGCCTGGACTATG
CGCGGCGCCTGCTCGCCGATAGCCGCTGCCGTGTCACCGAGGCCGCGCTGAGCAGCGGCTTCGTGCATCTGGCCCACTTC
TCGCGCGCCTACCAGGCCCGCTTCGGCGAGCGCCCGAGCGTGACGGCCGAGCGCGGTACCGTGTGA

Upstream 100 bases:

>100_bases
GCTGGCATGGATTCGTAACCGCTTGGCTCGCGGGCCAAGACATTTCCCTACCCTAGGCGGGTTGCAGGCAGGGTATTTGC
ACTAAATCGTCATTTAATAG

Downstream 100 bases:

>100_bases
CCCTTGGCGGTGCCCCGAGCCGGGAAGGGCGCCGATCGATATAACCAGGAGTTTTCACGTAGCCCTTGTTTCTCCTCTTG
CAAGTTATGTCGGGTTGGCT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MIFAMSELSTTDWPYPRPEQPPVPRPGEAAHTVDVWVVPNFSMLTLFCLLEPLRVANRFGRTLFAWRLLSADGEAVVASN
GVRIEVDGPLDAHCHGELLMVISSYQPEVSVTSAERAVLRHVAAHGGRVGGLDTAPFILARAGLLDHHRVALHWESVPAF
RAEFPHIAVSEARFEFAGQRLTGSGGAAGIDMMLQWIEHDYGPALANAVGRQLVHQRVSEEEAWKAGAARTLEDLPRSVV
RALAVMEAHLDQVLPMPEICRLAGQSQRQLTRLFVAHFGETPKQCYLGMRLDYARRLLADSRCRVTEAALSSGFVHLAHF
SRAYQARFGERPSVTAERGTV

Sequences:

>Translated_341_residues
MIFAMSELSTTDWPYPRPEQPPVPRPGEAAHTVDVWVVPNFSMLTLFCLLEPLRVANRFGRTLFAWRLLSADGEAVVASN
GVRIEVDGPLDAHCHGELLMVISSYQPEVSVTSAERAVLRHVAAHGGRVGGLDTAPFILARAGLLDHHRVALHWESVPAF
RAEFPHIAVSEARFEFAGQRLTGSGGAAGIDMMLQWIEHDYGPALANAVGRQLVHQRVSEEEAWKAGAARTLEDLPRSVV
RALAVMEAHLDQVLPMPEICRLAGQSQRQLTRLFVAHFGETPKQCYLGMRLDYARRLLADSRCRVTEAALSSGFVHLAHF
SRAYQARFGERPSVTAERGTV
>Mature_341_residues
MIFAMSELSTTDWPYPRPEQPPVPRPGEAAHTVDVWVVPNFSMLTLFCLLEPLRVANRFGRTLFAWRLLSADGEAVVASN
GVRIEVDGPLDAHCHGELLMVISSYQPEVSVTSAERAVLRHVAAHGGRVGGLDTAPFILARAGLLDHHRVALHWESVPAF
RAEFPHIAVSEARFEFAGQRLTGSGGAAGIDMMLQWIEHDYGPALANAVGRQLVHQRVSEEEAWKAGAARTLEDLPRSVV
RALAVMEAHLDQVLPMPEICRLAGQSQRQLTRLFVAHFGETPKQCYLGMRLDYARRLLADSRCRVTEAALSSGFVHLAHF
SRAYQARFGERPSVTAERGTV

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37625; Mature: 37625

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFAMSELSTTDWPYPRPEQPPVPRPGEAAHTVDVWVVPNFSMLTLFCLLEPLRVANRFG
CEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHH
RTLFAWRLLSADGEAVVASNGVRIEVDGPLDAHCHGELLMVISSYQPEVSVTSAERAVLR
HHHHHHHHHCCCCCEEEECCCEEEEECCCCCCCCCCCEEEEEECCCCCEEECHHHHHHHH
HVAAHGGRVGGLDTAPFILARAGLLDHHRVALHWESVPAFRAEFPHIAVSEARFEFAGQR
HHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHCCCCEEHHHHHHHHCCCE
LTGSGGAAGIDMMLQWIEHDYGPALANAVGRQLVHQRVSEEEAWKAGAARTLEDLPRSVV
ECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RALAVMEAHLDQVLPMPEICRLAGQSQRQLTRLFVAHFGETPKQCYLGMRLDYARRLLAD
HHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHC
SRCRVTEAALSSGFVHLAHFSRAYQARFGERPSVTAERGTV
CCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MIFAMSELSTTDWPYPRPEQPPVPRPGEAAHTVDVWVVPNFSMLTLFCLLEPLRVANRFG
CEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHH
RTLFAWRLLSADGEAVVASNGVRIEVDGPLDAHCHGELLMVISSYQPEVSVTSAERAVLR
HHHHHHHHHCCCCCEEEECCCEEEEECCCCCCCCCCCEEEEEECCCCCEEECHHHHHHHH
HVAAHGGRVGGLDTAPFILARAGLLDHHRVALHWESVPAFRAEFPHIAVSEARFEFAGQR
HHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHCCCCEEHHHHHHHHCCCE
LTGSGGAAGIDMMLQWIEHDYGPALANAVGRQLVHQRVSEEEAWKAGAARTLEDLPRSVV
ECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RALAVMEAHLDQVLPMPEICRLAGQSQRQLTRLFVAHFGETPKQCYLGMRLDYARRLLAD
HHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHC
SRCRVTEAALSSGFVHLAHFSRAYQARFGERPSVTAERGTV
CCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]