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The map label for this gene is yajR [H]

Identifier: 92112582

GI number: 92112582

Start: 496253

End: 497635

Strand: Direct

Name: yajR [H]

Synonym: Csal_0449

Alternate gene names: 92112582

Gene position: 496253-497635 (Clockwise)

Preceding gene: 92112580

Following gene: 92112583

Centisome position: 13.42

GC content: 65.87

Gene sequence:

>1383_bases
ATGTCTTCATCTCTACTTCGTACCGAGCGGCGCGCCATTTTCGGCCTCGCCAGCTTATACGCCACGCGCATGCTCGGTCT
GTTCATGGTATTACCGGTCCTGGCGGTCTATGCCGAGGACCTGGATGGCGCCACGCCCCTGCTGGTGGGCATGGCGTTGG
GCGGTTACGGTCTGACGCAGGCGATTCTGCAGATTCCCTTCGGGCTCATGTCGGATCGCTTCGGCCGCAAGCTCATCATC
AGCGTGGGATTGCTCCTGTTTCTGCTGGGCAGCGTGATCGCGGCGCAGGCGACCTCGATCGGCTGGGTCATCGCCGGCCG
CTGTCTGCAAGGCAGCGGCGCGGTCGCCGGTGCGATCATGGCGTTGCTCGCCGACCAGACGCGGGAGGAAGTCCGCACGG
CGGCGATGGCGACCATCGGGCTGTCCATCGGTATCGCCTTCGGCGTGGCGATGGTCGTGGGTCCCCTGGTCGCCGACCCT
TTCGGCCTGGCCGGCGTGTTCTGGTTCACGGCCGTGCTGGCGGTGGTCGGTCTGCTGGTGCTGTGGCGTCTGGTGCCGCG
GGCGCCACGCTTGATGGCACACCGTGACGTCGGACTCGATCGCACGCAGTTGCGCGCGATGCTCGCGCGGCATGATCTGC
TGCGGCTGGATTTCTCGATTTTCGCACTGCATGCCATTCTCACCGCCTGCTTCGTGGCCGTGCCCTTCCGGCTGGAAGCC
CTGGGCATCGCCCCGGCACACCATGGCTGGGTCTATTTGCCGATCATGGCACTGGCCTTCGTGGGCATGGTTCCGCTGGT
GATCGTGGCCGAGAAATACCGCAAGATGAAACCCATCTTTCTCGGGGCAGTGGCCTGGCTGACCCTCTGTCTGGCCGGGC
TGGTGGAGTTTTCCGACGGCCGCTGGAGCCTGTTTGCCCTTCTCTGGGGCTTCTTCGTGGCATTCAACCTGCTCGAGGCG
ACGCTGCCGTCGATGATCAGCAAGCTGGCACCGGCGGGTGCCAAGGGCACGGCGATGGGCGTGTACTCCACCAGCCAGTT
CCTGGGGGCGTTCCTGGGCGGCACCGCGGGCGGTTTCCTCTCGCAGCACTACGGGCTGAGTGCCGTCTTTCTGGGCGCCG
CCCTGCTGGGTGCGGTATGGTTGGCGATTGTCTGGAAGATGCCGGCACCCCGCCATCTCTCGAGCGAGATCGTCGCCCTG
GACGAGCGCTCCCTGGGCACAGTGGATACACTGATGGACCGCTTCGCCGCCGTGGCCGGTGTCGAGGATGTCATGGTAGT
GCCCGACGAGCGTGTCGCCTACCTCAAGGTCGACCGGCAGCGGCTGGACGCGGAGGCGCTGGCCCGCGTTCTGGGTACCG
AACCGGATCACAAGCGCGCCTGA

Upstream 100 bases:

>100_bases
CGATGCGCCGGCTTGTCTGTTCGTCACGGTCCGCTCCTGCGAGCCCTTCGGACCGATTTCGGTATCGAACGTTTCTTTTC
CTCAACGACGCGACTCAATC

Downstream 100 bases:

>100_bases
CGACGGGCGCTTAACTATTTCAAGGAGACTCACATGGCTCGCGGCGTCAACAAGGTCATTCTGATCGGCAACCTCGGTCA
GGACCCGGAAGTTCGCTTTC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 459

Protein sequence:

>460_residues
MSSSLLRTERRAIFGLASLYATRMLGLFMVLPVLAVYAEDLDGATPLLVGMALGGYGLTQAILQIPFGLMSDRFGRKLII
SVGLLLFLLGSVIAAQATSIGWVIAGRCLQGSGAVAGAIMALLADQTREEVRTAAMATIGLSIGIAFGVAMVVGPLVADP
FGLAGVFWFTAVLAVVGLLVLWRLVPRAPRLMAHRDVGLDRTQLRAMLARHDLLRLDFSIFALHAILTACFVAVPFRLEA
LGIAPAHHGWVYLPIMALAFVGMVPLVIVAEKYRKMKPIFLGAVAWLTLCLAGLVEFSDGRWSLFALLWGFFVAFNLLEA
TLPSMISKLAPAGAKGTAMGVYSTSQFLGAFLGGTAGGFLSQHYGLSAVFLGAALLGAVWLAIVWKMPAPRHLSSEIVAL
DERSLGTVDTLMDRFAAVAGVEDVMVVPDERVAYLKVDRQRLDAEALARVLGTEPDHKRA

Sequences:

>Translated_460_residues
MSSSLLRTERRAIFGLASLYATRMLGLFMVLPVLAVYAEDLDGATPLLVGMALGGYGLTQAILQIPFGLMSDRFGRKLII
SVGLLLFLLGSVIAAQATSIGWVIAGRCLQGSGAVAGAIMALLADQTREEVRTAAMATIGLSIGIAFGVAMVVGPLVADP
FGLAGVFWFTAVLAVVGLLVLWRLVPRAPRLMAHRDVGLDRTQLRAMLARHDLLRLDFSIFALHAILTACFVAVPFRLEA
LGIAPAHHGWVYLPIMALAFVGMVPLVIVAEKYRKMKPIFLGAVAWLTLCLAGLVEFSDGRWSLFALLWGFFVAFNLLEA
TLPSMISKLAPAGAKGTAMGVYSTSQFLGAFLGGTAGGFLSQHYGLSAVFLGAALLGAVWLAIVWKMPAPRHLSSEIVAL
DERSLGTVDTLMDRFAAVAGVEDVMVVPDERVAYLKVDRQRLDAEALARVLGTEPDHKRA
>Mature_459_residues
SSSLLRTERRAIFGLASLYATRMLGLFMVLPVLAVYAEDLDGATPLLVGMALGGYGLTQAILQIPFGLMSDRFGRKLIIS
VGLLLFLLGSVIAAQATSIGWVIAGRCLQGSGAVAGAIMALLADQTREEVRTAAMATIGLSIGIAFGVAMVVGPLVADPF
GLAGVFWFTAVLAVVGLLVLWRLVPRAPRLMAHRDVGLDRTQLRAMLARHDLLRLDFSIFALHAILTACFVAVPFRLEAL
GIAPAHHGWVYLPIMALAFVGMVPLVIVAEKYRKMKPIFLGAVAWLTLCLAGLVEFSDGRWSLFALLWGFFVAFNLLEAT
LPSMISKLAPAGAKGTAMGVYSTSQFLGAFLGGTAGGFLSQHYGLSAVFLGAALLGAVWLAIVWKMPAPRHLSSEIVALD
ERSLGTVDTLMDRFAAVAGVEDVMVVPDERVAYLKVDRQRLDAEALARVLGTEPDHKRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=445, Percent_Identity=45.8426966292135, Blast_Score=362, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 49147; Mature: 49016

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSLLRTERRAIFGLASLYATRMLGLFMVLPVLAVYAEDLDGATPLLVGMALGGYGLTQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHH
AILQIPFGLMSDRFGRKLIISVGLLLFLLGSVIAAQATSIGWVIAGRCLQGSGAVAGAIM
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHH
ALLADQTREEVRTAAMATIGLSIGIAFGVAMVVGPLVADPFGLAGVFWFTAVLAVVGLLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LWRLVPRAPRLMAHRDVGLDRTQLRAMLARHDLLRLDFSIFALHAILTACFVAVPFRLEA
HHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGIAPAHHGWVYLPIMALAFVGMVPLVIVAEKYRKMKPIFLGAVAWLTLCLAGLVEFSDG
EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCC
RWSLFALLWGFFVAFNLLEATLPSMISKLAPAGAKGTAMGVYSTSQFLGAFLGGTAGGFL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHCCCHHHHH
SQHYGLSAVFLGAALLGAVWLAIVWKMPAPRHLSSEIVALDERSLGTVDTLMDRFAAVAG
HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEECCCCCCHHHHHHHHHHHHHC
VEDVMVVPDERVAYLKVDRQRLDAEALARVLGTEPDHKRA
CCCEEECCCCCEEHHHHHHHHCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SSSLLRTERRAIFGLASLYATRMLGLFMVLPVLAVYAEDLDGATPLLVGMALGGYGLTQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHH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CCCEEECCCCCEEHHHHHHHHCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]