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The map label for this gene is secY [H]

Identifier: 92112574

GI number: 92112574

Start: 488520

End: 489851

Strand: Direct

Name: secY [H]

Synonym: Csal_0441

Alternate gene names: 92112574

Gene position: 488520-489851 (Clockwise)

Preceding gene: 92112573

Following gene: 92112575

Centisome position: 13.22

GC content: 58.71

Gene sequence:

>1332_bases
ATGGCTAAGTCAGGAAACATGCCGGCCAGTGGAAGTGGTCTGAGTGAACTTTGGGCGCGTCTGCGTTTCGTGTTCATCGC
CATCGTGGTGTACCGCATCGGTGCCCATATCCCGGTGCCTGGCATCAATCCTGACCAGCTCGCTGCCTTGTTCAGGGAAA
ATCAGGGCACCATCCTGGGCATGTTCAACATGTTCTCGGGTGGTGCGCTGTCGCGCATGAGTATTTTCGCGCTGGGGATC
ATGCCTTACATCTCCGCGTCGATCATCATGCAGCTCCTGACGGCGGTCTCGCCTCAGCTGGAACAGCTGAAGAAGGAAGG
TGAGGCTGGCCGGCGCAAGATCAACCAGTATACGCGCTACGGCACGGTGGTGCTGGCATTGATCCAGGCGACCGGCATGG
CAGTCGGTCTGGTCGGACAGGGTGTCGCCTATAGTGGCGATCTCAGCTTCTACTTCACCGCAATCGTGACGTTCGTCGCG
GGTGCCGTGTTCCTCATGTGGCTGGGCGAGCAGATCACCGAGAAGGGGATTGGCAACGGCATTTCCCTTATTATCTTCGC
GGGTATCGTCGCAGGCCTGCCCAGCGCCATCGGCCAGTCGTTTACACTGGCGCGCAACGATGGGGCCTGGAATATCCTGC
CGCTGCTGGCGTTGGCAGTGCTTGGGATCGCTACCGTGGCCTTCGTGGTCTTCATCGAGCGCGGTCAGCGTCGCATCACG
GTGAACTATCCGCGTCGTCAGGTAGGCAACAAGATGTATGCCGGGCAGAGCAGCTATCTGCCGCTGAAGGTGAACATGGC
CGGCGTCATTCCGCCGATCTTCGCTTCCAGCATTCTGCTGTTCCCCGCGTCCATTGGCCAATGGGTCGGTGAAGGCCAGA
ACATGGCCTGGTTGCAGACGGTTTCCCAGGCGATGGGGCCGGGTCAGCCGTTGTACATCTTGCTTTTCGCCGCGGCGGTG
CTATTCTTCTGCTTCTTTTACACGGCGTTGGTCTTCAACCCCAAGGATGTGGCCGACAACCTCAAGAAGTCAGGTGCATT
CCTGCCGGGTATTCGCCCGGGCGAGCAGACGGCCCGCTATGTCGATAAGGTCATGACGCGTCTGACGCTTTTCGGCGCCT
TGTACATCACTGCAGTCTCCCTGATGCCTCAGTTCCTCGTGGTGGCATGGCAAGTGCCCTTCTATTTCGGCGGCACTTCA
TTGCTCATCGTCGTGGTGGTGGTCATGGACTTCATGGCCCAGGTGCAGTCGCACCTGATGTCCAATCAGTATGAGTCGGT
GATGAAAAAGTCCAACCTGAAAGGCTATGGCAGCGGCGGCATCCTGCGCTAA

Upstream 100 bases:

>100_bases
TCTCCGGTGAACTGAACAAAGCAGTCACGGTCCGTGGTCTCAAGGTCACCAAGGGTGCCCGTGACGCGATCGCAGCTGCC
GGTGGCAAGGTAGAGGACTA

Downstream 100 bases:

>100_bases
ACGAGCCCCGCTAGGTTTTTTGGAGAGAACGATGAAAGTTCGAGCTTCCGTCAAGAAAATGTGCCGTAACTGCAAGATCA
TTCGGCGCAATGGCGCGATT

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 442

Protein sequence:

>443_residues
MAKSGNMPASGSGLSELWARLRFVFIAIVVYRIGAHIPVPGINPDQLAALFRENQGTILGMFNMFSGGALSRMSIFALGI
MPYISASIIMQLLTAVSPQLEQLKKEGEAGRRKINQYTRYGTVVLALIQATGMAVGLVGQGVAYSGDLSFYFTAIVTFVA
GAVFLMWLGEQITEKGIGNGISLIIFAGIVAGLPSAIGQSFTLARNDGAWNILPLLALAVLGIATVAFVVFIERGQRRIT
VNYPRRQVGNKMYAGQSSYLPLKVNMAGVIPPIFASSILLFPASIGQWVGEGQNMAWLQTVSQAMGPGQPLYILLFAAAV
LFFCFFYTALVFNPKDVADNLKKSGAFLPGIRPGEQTARYVDKVMTRLTLFGALYITAVSLMPQFLVVAWQVPFYFGGTS
LLIVVVVVMDFMAQVQSHLMSNQYESVMKKSNLKGYGSGGILR

Sequences:

>Translated_443_residues
MAKSGNMPASGSGLSELWARLRFVFIAIVVYRIGAHIPVPGINPDQLAALFRENQGTILGMFNMFSGGALSRMSIFALGI
MPYISASIIMQLLTAVSPQLEQLKKEGEAGRRKINQYTRYGTVVLALIQATGMAVGLVGQGVAYSGDLSFYFTAIVTFVA
GAVFLMWLGEQITEKGIGNGISLIIFAGIVAGLPSAIGQSFTLARNDGAWNILPLLALAVLGIATVAFVVFIERGQRRIT
VNYPRRQVGNKMYAGQSSYLPLKVNMAGVIPPIFASSILLFPASIGQWVGEGQNMAWLQTVSQAMGPGQPLYILLFAAAV
LFFCFFYTALVFNPKDVADNLKKSGAFLPGIRPGEQTARYVDKVMTRLTLFGALYITAVSLMPQFLVVAWQVPFYFGGTS
LLIVVVVVMDFMAQVQSHLMSNQYESVMKKSNLKGYGSGGILR
>Mature_442_residues
AKSGNMPASGSGLSELWARLRFVFIAIVVYRIGAHIPVPGINPDQLAALFRENQGTILGMFNMFSGGALSRMSIFALGIM
PYISASIIMQLLTAVSPQLEQLKKEGEAGRRKINQYTRYGTVVLALIQATGMAVGLVGQGVAYSGDLSFYFTAIVTFVAG
AVFLMWLGEQITEKGIGNGISLIIFAGIVAGLPSAIGQSFTLARNDGAWNILPLLALAVLGIATVAFVVFIERGQRRITV
NYPRRQVGNKMYAGQSSYLPLKVNMAGVIPPIFASSILLFPASIGQWVGEGQNMAWLQTVSQAMGPGQPLYILLFAAAVL
FFCFFYTALVFNPKDVADNLKKSGAFLPGIRPGEQTARYVDKVMTRLTLFGALYITAVSLMPQFLVVAWQVPFYFGGTSL
LIVVVVVMDFMAQVQSHLMSNQYESVMKKSNLKGYGSGGILR

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=436, Percent_Identity=65.8256880733945, Blast_Score=530, Evalue=1e-152,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 47882; Mature: 47751

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKSGNMPASGSGLSELWARLRFVFIAIVVYRIGAHIPVPGINPDQLAALFRENQGTILG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEE
MFNMFSGGALSRMSIFALGIMPYISASIIMQLLTAVSPQLEQLKKEGEAGRRKINQYTRY
EHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
GTVVLALIQATGMAVGLVGQGVAYSGDLSFYFTAIVTFVAGAVFLMWLGEQITEKGIGNG
HHHHHHHHHHHCCCEEHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ISLIIFAGIVAGLPSAIGQSFTLARNDGAWNILPLLALAVLGIATVAFVVFIERGQRRIT
HHHHHHHHHHHHCHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
VNYPRRQVGNKMYAGQSSYLPLKVNMAGVIPPIFASSILLFPASIGQWVGEGQNMAWLQT
EECCHHHHCCCEECCCCCCCEEEECCHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
VSQAMGPGQPLYILLFAAAVLFFCFFYTALVFNPKDVADNLKKSGAFLPGIRPGEQTARY
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHH
VDKVMTRLTLFGALYITAVSLMPQFLVVAWQVPFYFGGTSLLIVVVVVMDFMAQVQSHLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHH
SNQYESVMKKSNLKGYGSGGILR
HHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
AKSGNMPASGSGLSELWARLRFVFIAIVVYRIGAHIPVPGINPDQLAALFRENQGTILG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEE
MFNMFSGGALSRMSIFALGIMPYISASIIMQLLTAVSPQLEQLKKEGEAGRRKINQYTRY
EHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
GTVVLALIQATGMAVGLVGQGVAYSGDLSFYFTAIVTFVAGAVFLMWLGEQITEKGIGNG
HHHHHHHHHHHCCCEEHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ISLIIFAGIVAGLPSAIGQSFTLARNDGAWNILPLLALAVLGIATVAFVVFIERGQRRIT
HHHHHHHHHHHHCHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
VNYPRRQVGNKMYAGQSSYLPLKVNMAGVIPPIFASSILLFPASIGQWVGEGQNMAWLQT
EECCHHHHCCCEECCCCCCCEEEECCHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
VSQAMGPGQPLYILLFAAAVLFFCFFYTALVFNPKDVADNLKKSGAFLPGIRPGEQTARY
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHH
VDKVMTRLTLFGALYITAVSLMPQFLVVAWQVPFYFGGTSLLIVVVVVMDFMAQVQSHLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHH
SNQYESVMKKSNLKGYGSGGILR
HHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]