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The map label for this gene is nusG [H]

Identifier: 92112542

GI number: 92112542

Start: 463141

End: 463674

Strand: Direct

Name: nusG [H]

Synonym: Csal_0409

Alternate gene names: 92112542

Gene position: 463141-463674 (Clockwise)

Preceding gene: 92112541

Following gene: 92112543

Centisome position: 12.53

GC content: 59.93

Gene sequence:

>534_bases
ATGTCCAAGCGTTGGTACGTCGTCCACGCCTACTCCGGCTTCGAAAAGCATGTGATGCGCTCCCTGATGGAGCGCGTCAA
GATGTATGGCATGGAAGACCAGTTTGGCGAAATTCTGGTGCCGACCGAAGAAGTCGTCGAGATGCGTGATGGCAAGCGCC
GCAAGAGCGAGCGCAAGTTCTATCCCGGGTACGTGCTGGTCGAGATGGAAATGACCGATGCGTCCTGGCACCTGGTGAAC
GAAACGCCACGCGTGATGGGGTTCATCGGCGGTACGCCGGAAAAGCCGGCGCCGATCACGCAGAAGGAAGCCGATGGCAT
TCTGCGTCGTGTGCAGGATGGCACGGACAAGCCGCGCCCCAAGACGTTGTTCGATCCGGGCGAGACCGTGCGTGTCGTGG
ATGGCCCCTTTGCCGACTTCAACGGCGTCGTGGAAGAGGTCAACTACGAGAAGAGCCGTCTGCAGGTCAGTGTGCTGATC
TTCGGGCGTTCCACGCCAGTGGAGCTCGAGTTCGCGCAGGTCGAGAAAGACTGA

Upstream 100 bases:

>100_bases
CCATCGTCCTGGTCGCCGTGCTGCTGGTCGGCATCATGCTGTGGCTGATCGATACGCTTCTCGGCTGGATCATGTCCGGC
ATCATAGGTTAGGAGTTTTC

Downstream 100 bases:

>100_bases
ATTCAATGCGCCGGCTTTCGTGAGCCGGTGCATGTCGTGGAGGCCTCCGGGCCTCGCTGAACCGGGGAGCCGCAAGGCGC
TAACACCCAACTGGAGTTAA

Product: transcription antitermination protein NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MSKRWYVVHAYSGFEKHVMRSLMERVKMYGMEDQFGEILVPTEEVVEMRDGKRRKSERKFYPGYVLVEMEMTDASWHLVN
ETPRVMGFIGGTPEKPAPITQKEADGILRRVQDGTDKPRPKTLFDPGETVRVVDGPFADFNGVVEEVNYEKSRLQVSVLI
FGRSTPVELEFAQVEKD

Sequences:

>Translated_177_residues
MSKRWYVVHAYSGFEKHVMRSLMERVKMYGMEDQFGEILVPTEEVVEMRDGKRRKSERKFYPGYVLVEMEMTDASWHLVN
ETPRVMGFIGGTPEKPAPITQKEADGILRRVQDGTDKPRPKTLFDPGETVRVVDGPFADFNGVVEEVNYEKSRLQVSVLI
FGRSTPVELEFAQVEKD
>Mature_176_residues
SKRWYVVHAYSGFEKHVMRSLMERVKMYGMEDQFGEILVPTEEVVEMRDGKRRKSERKFYPGYVLVEMEMTDASWHLVNE
TPRVMGFIGGTPEKPAPITQKEADGILRRVQDGTDKPRPKTLFDPGETVRVVDGPFADFNGVVEEVNYEKSRLQVSVLIF
GRSTPVELEFAQVEKD

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=174, Percent_Identity=72.9885057471264, Blast_Score=266, Evalue=5e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 20393; Mature: 20261

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRWYVVHAYSGFEKHVMRSLMERVKMYGMEDQFGEILVPTEEVVEMRDGKRRKSERKF
CCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHCCCCCCCCCCC
YPGYVLVEMEMTDASWHLVNETPRVMGFIGGTPEKPAPITQKEADGILRRVQDGTDKPRP
CCCEEEEEEEECCCEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
KTLFDPGETVRVVDGPFADFNGVVEEVNYEKSRLQVSVLIFGRSTPVELEFAQVEKD
CCCCCCCCEEEEECCCCCCHHHHHHHCCCCCHHEEEEEEEEECCCCCEEEEEEECCC
>Mature Secondary Structure 
SKRWYVVHAYSGFEKHVMRSLMERVKMYGMEDQFGEILVPTEEVVEMRDGKRRKSERKF
CCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHCCCCCCCCCCC
YPGYVLVEMEMTDASWHLVNETPRVMGFIGGTPEKPAPITQKEADGILRRVQDGTDKPRP
CCCEEEEEEEECCCEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
KTLFDPGETVRVVDGPFADFNGVVEEVNYEKSRLQVSVLIFGRSTPVELEFAQVEKD
CCCCCCCCEEEEECCCCCCHHHHHHHCCCCCHHEEEEEEEEECCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]