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The map label for this gene is yrdA [H]

Identifier: 92112534

GI number: 92112534

Start: 447757

End: 448296

Strand: Direct

Name: yrdA [H]

Synonym: Csal_0401

Alternate gene names: 92112534

Gene position: 447757-448296 (Clockwise)

Preceding gene: 92112533

Following gene: 92112535

Centisome position: 12.11

GC content: 65.0

Gene sequence:

>540_bases
ATGACACTGCGGACGTTTCAGGGAATGACGCCGCGCCTGGGCGCACGGGTCTACCTCGACCCCGCCTGCGTGGTGCTGGG
CGACGTTACCCTGGGGGACGACTGTTCGGTATGGCCGATGACCGTGATTCGCGGCGACATGCACCGCATCCGCATCGGTG
CGCGCTGCAGCATCCAGGATGGCAGCGTGCTGCACATCACCCATGCCAGCGACTATAACCCCGAGGGCTATCCGCTGACG
CTCGGTGACGACGTGACGGTGGGTCACAAGGCGCTGCTGCATGGGTGTACCATCGGCAGTCGGGTACTGGTGGGCATGGG
CGCCACGGTCATGGATGGCGTGGTCGTCGAGGATGAGGTGATCATCGCCGCCGGAGCAGTGGTGACACCGGGCAAGCGCC
TGGAAAGCGGGCACGTCTATGCGGGGAACCCCGCGAAGCCGCTGCGCGCGCTCAAGGAGGGCGAGCGCGCGTTCTTCACG
TATACGGCGGGCAATTACGTCAAGCTCAAGGACGACTACTTGGCCCAGCCTTCCGTGTAA

Upstream 100 bases:

>100_bases
CCACTGCTGGTGATCGTACTGCTCTCGGCGCTTTGGTGAGGGGAGCCGCCGCAAGGCATGCCACCCTATTGGCAACGACA
ACAGGACAAGGAGACAGCTG

Downstream 100 bases:

>100_bases
CGCTGCCGGCATGGCCTGCGCGGTCCGTCTTTTCTCGTTCAACGCATTGTTTTGTCTCGTCGCGAAGCCGCATAATCTGG
TTTTTCATCCAGTATTGTCG

Product: anhydrase family 3 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MTLRTFQGMTPRLGARVYLDPACVVLGDVTLGDDCSVWPMTVIRGDMHRIRIGARCSIQDGSVLHITHASDYNPEGYPLT
LGDDVTVGHKALLHGCTIGSRVLVGMGATVMDGVVVEDEVIIAAGAVVTPGKRLESGHVYAGNPAKPLRALKEGERAFFT
YTAGNYVKLKDDYLAQPSV

Sequences:

>Translated_179_residues
MTLRTFQGMTPRLGARVYLDPACVVLGDVTLGDDCSVWPMTVIRGDMHRIRIGARCSIQDGSVLHITHASDYNPEGYPLT
LGDDVTVGHKALLHGCTIGSRVLVGMGATVMDGVVVEDEVIIAAGAVVTPGKRLESGHVYAGNPAKPLRALKEGERAFFT
YTAGNYVKLKDDYLAQPSV
>Mature_178_residues
TLRTFQGMTPRLGARVYLDPACVVLGDVTLGDDCSVWPMTVIRGDMHRIRIGARCSIQDGSVLHITHASDYNPEGYPLTL
GDDVTVGHKALLHGCTIGSRVLVGMGATVMDGVVVEDEVIIAAGAVVTPGKRLESGHVYAGNPAKPLRALKEGERAFFTY
TAGNYVKLKDDYLAQPSV

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=174, Percent_Identity=58.0459770114943, Blast_Score=226, Evalue=9e-61,
Organism=Escherichia coli, GI1787667, Length=169, Percent_Identity=34.9112426035503, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI87081681, Length=169, Percent_Identity=32.5443786982249, Blast_Score=100, Evalue=8e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19155; Mature: 19024

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRTFQGMTPRLGARVYLDPACVVLGDVTLGDDCSVWPMTVIRGDMHRIRIGARCSIQD
CCCCCCCCCCCCCCEEEEECCEEEEEECCEECCCCCCCCCEEEECCCEEEEECCEEEECC
GSVLHITHASDYNPEGYPLTLGDDVTVGHKALLHGCTIGSRVLVGMGATVMDGVVVEDEV
CCEEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHCCCCCEEEEECCCHHHCCEEECCCE
IIAAGAVVTPGKRLESGHVYAGNPAKPLRALKEGERAFFTYTAGNYVKLKDDYLAQPSV
EEEECCEECCCCCCCCCEEEECCCCHHHHHHHCCCEEEEEEECCCEEEECCCCCCCCCC
>Mature Secondary Structure 
TLRTFQGMTPRLGARVYLDPACVVLGDVTLGDDCSVWPMTVIRGDMHRIRIGARCSIQD
CCCCCCCCCCCCCEEEEECCEEEEEECCEECCCCCCCCCEEEECCCEEEEECCEEEECC
GSVLHITHASDYNPEGYPLTLGDDVTVGHKALLHGCTIGSRVLVGMGATVMDGVVVEDEV
CCEEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHCCCCCEEEEECCCHHHCCEEECCCE
IIAAGAVVTPGKRLESGHVYAGNPAKPLRALKEGERAFFTYTAGNYVKLKDDYLAQPSV
EEEECCEECCCCCCCCCEEEECCCCHHHHHHHCCCEEEEEEECCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]