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The map label for this gene is sodC [H]

Identifier: 92112530

GI number: 92112530

Start: 443208

End: 443738

Strand: Direct

Name: sodC [H]

Synonym: Csal_0397

Alternate gene names: 92112530

Gene position: 443208-443738 (Clockwise)

Preceding gene: 92112529

Following gene: 92112533

Centisome position: 11.99

GC content: 66.29

Gene sequence:

>531_bases
ATGCTACGTATCTCGCAGATGGCACTCGGCCTCGGTGGCGCCTTGCTGATGCTGGGCAGTGCCCAGGCAGCGCAACACGA
CATCGAGCTGCATCAGGTCAATGCGCAAGGCACCGGCGACAGCGTCGGCAGCGTCACGCTCGAGGATACCGACTACGGCC
TGCTGTTGACCCCGGATCTGTCAGGTCTCGAACCCGGCATGCACGGGTTCCACGTGCACATGAACCCGAGCTGCCAGCCT
TCGGAGCAGGACGGGGAAACGGTGCCGGGCGGTGCTGCCGGCGGCCACTACGATCCCGAGGACACCGGCACGCACCAGGG
CCCTTACGGCGACGGGCATCTCGGAGATCTGCCGGTCTTGATGGTCGACGACGACGGCAATGCCACGACTCCGGTGCTGG
CGCCACGCCTGGAAGCATCCGATCTCCAGGGCCGTGCGCTGATGGTGCACGTCGGCGGTGACAATTACAGCGATGAACCC
AAGCTGGGCGGCGGCGGCAAGCGTGTCGCCTGCGGCACCTGGTCCCAGTGA

Upstream 100 bases:

>100_bases
GCTCGACAACCTGCGCTGCGATACCTGAGTCATGGCGCCGTTCGCAGCTGTCGTCTAGCCTGACACACGTAGACGTCTCA
CTCATGGACAGGAGAAAGGC

Downstream 100 bases:

>100_bases
AGGCACCTCGGTAATGGCGCAACGCGAAAAGGCTCCCGATCGGGAGCCTTTTTCATTCCATGACGGTGCCGCGCGGCTCG
GCGTCAGTGCGTCTTGCCGT

Product: copper/zinc binding superoxide dismutase

Products: NA

Alternate protein names: Bacteriocuprein [H]

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MLRISQMALGLGGALLMLGSAQAAQHDIELHQVNAQGTGDSVGSVTLEDTDYGLLLTPDLSGLEPGMHGFHVHMNPSCQP
SEQDGETVPGGAAGGHYDPEDTGTHQGPYGDGHLGDLPVLMVDDDGNATTPVLAPRLEASDLQGRALMVHVGGDNYSDEP
KLGGGGKRVACGTWSQ

Sequences:

>Translated_176_residues
MLRISQMALGLGGALLMLGSAQAAQHDIELHQVNAQGTGDSVGSVTLEDTDYGLLLTPDLSGLEPGMHGFHVHMNPSCQP
SEQDGETVPGGAAGGHYDPEDTGTHQGPYGDGHLGDLPVLMVDDDGNATTPVLAPRLEASDLQGRALMVHVGGDNYSDEP
KLGGGGKRVACGTWSQ
>Mature_176_residues
MLRISQMALGLGGALLMLGSAQAAQHDIELHQVNAQGTGDSVGSVTLEDTDYGLLLTPDLSGLEPGMHGFHVHMNPSCQP
SEQDGETVPGGAAGGHYDPEDTGTHQGPYGDGHLGDLPVLMVDDDGNATTPVLAPRLEASDLQGRALMVHVGGDNYSDEP
KLGGGGKRVACGTWSQ

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems [H]

COG id: COG2032

COG function: function code P; Cu/Zn superoxide dismutase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cu-Zn superoxide dismutase family [H]

Homologues:

Organism=Escherichia coli, GI1787934, Length=177, Percent_Identity=53.6723163841808, Blast_Score=186, Evalue=9e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018152
- InterPro:   IPR001424 [H]

Pfam domain/function: PF00080 Sod_Cu [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 18135; Mature: 18135

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRISQMALGLGGALLMLGSAQAAQHDIELHQVNAQGTGDSVGSVTLEDTDYGLLLTPDL
CEECHHHHHCCCCEEEEECCCCHHHCCEEEEEEECCCCCCCCCEEEECCCCCEEEECCCC
SGLEPGMHGFHVHMNPSCQPSEQDGETVPGGAAGGHYDPEDTGTHQGPYGDGHLGDLPVL
CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
MVDDDGNATTPVLAPRLEASDLQGRALMVHVGGDNYSDEPKLGGGGKRVACGTWSQ
EEECCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCC
>Mature Secondary Structure
MLRISQMALGLGGALLMLGSAQAAQHDIELHQVNAQGTGDSVGSVTLEDTDYGLLLTPDL
CEECHHHHHCCCCEEEEECCCCHHHCCEEEEEEECCCCCCCCCEEEECCCCCEEEECCCC
SGLEPGMHGFHVHMNPSCQPSEQDGETVPGGAAGGHYDPEDTGTHQGPYGDGHLGDLPVL
CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
MVDDDGNATTPVLAPRLEASDLQGRALMVHVGGDNYSDEPKLGGGGKRVACGTWSQ
EEECCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]