Click here to switch to the map view.

The map label for this gene is allA [H]

Identifier: 92112215

GI number: 92112215

Start: 100011

End: 100499

Strand: Direct

Name: allA [H]

Synonym: Csal_0080

Alternate gene names: 92112215

Gene position: 100011-100499 (Clockwise)

Preceding gene: 92112214

Following gene: 92112218

Centisome position: 2.71

GC content: 67.69

Gene sequence:

>489_bases
ATGCTCGAACTTACCGCCCAGCCCCTGACTGCCGAAGCCTTCGCGCCGTTCGGCGATGTCATCGACCGCCGGGACGCCGA
CGGCTTTCCCATCAACGGCGGTCGCACCCAGCGCTATCACGACCTGGCGCGGATCGAAACGCTCGGCGAGGGGGCTCGGC
CGCTGATCAGCCTCTTCGTCAGCCAGCCCGTGACACTGCCGCTGACGCTGGACTTTCTCGAACGTCATCCGCTGGGCAGT
CAGGCGTTCATGCCGCTGCACGGGGAGCGCTTCATCGTCGTCGTCGCGCCACCGGGAGAGGCCGTGGACCCGGCACGGGT
ACGGGCCTTCGTCACCGATGGTCGCCAGGGGGTCAACTACCGCGCCGGCACCTGGCATGCCATTCACTCGGTGCTCGACG
TGGAAGGCGAGTTTCTGGTGGTCGACCGTGGCGGAGCGGGCGACAACTGCGACGAGTTCCCGCTGGCGATGCGCGTGAGC
CTGCCTTGA

Upstream 100 bases:

>100_bases
TACGCCGCCGGGCCGGGGCCGTTTCGCTATCTGCTCTACAAGGATGTGAACCGGCACATGAAGCTGCGCTTGAGCTGAGA
CAATCCTCCGAGGAGAACGC

Downstream 100 bases:

>100_bases
GGCTCTCGTCGTAGACAGTCGCCGACATTCATCCCGCGGGCAGCGGCTTCCCGCGTGCGGCGCGTTGCCGTTCGCGCAAC
CATTGCTGCATCAACGCCAC

Product: ureidoglycolate hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MLELTAQPLTAEAFAPFGDVIDRRDADGFPINGGRTQRYHDLARIETLGEGARPLISLFVSQPVTLPLTLDFLERHPLGS
QAFMPLHGERFIVVVAPPGEAVDPARVRAFVTDGRQGVNYRAGTWHAIHSVLDVEGEFLVVDRGGAGDNCDEFPLAMRVS
LP

Sequences:

>Translated_162_residues
MLELTAQPLTAEAFAPFGDVIDRRDADGFPINGGRTQRYHDLARIETLGEGARPLISLFVSQPVTLPLTLDFLERHPLGS
QAFMPLHGERFIVVVAPPGEAVDPARVRAFVTDGRQGVNYRAGTWHAIHSVLDVEGEFLVVDRGGAGDNCDEFPLAMRVS
LP
>Mature_162_residues
MLELTAQPLTAEAFAPFGDVIDRRDADGFPINGGRTQRYHDLARIETLGEGARPLISLFVSQPVTLPLTLDFLERHPLGS
QAFMPLHGERFIVVVAPPGEAVDPARVRAFVTDGRQGVNYRAGTWHAIHSVLDVEGEFLVVDRGGAGDNCDEFPLAMRVS
LP

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Reinforces The Induction Of Genes Involved In The Degradation Of Allantoin And Glyoxylate By Producing Glyoxylate. [C]

COG id: COG3194

COG function: function code F; Ureidoglycolate hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureidoglycolate hydrolase family [H]

Homologues:

Organism=Escherichia coli, GI1786714, Length=150, Percent_Identity=48.6666666666667, Blast_Score=142, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR007247 [H]

Pfam domain/function: PF04115 Ureidogly_hydro [H]

EC number: =3.5.3.19 [H]

Molecular weight: Translated: 17673; Mature: 17673

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELTAQPLTAEAFAPFGDVIDRRDADGFPINGGRTQRYHDLARIETLGEGARPLISLFV
CCCCCCCCCCHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
SQPVTLPLTLDFLERHPLGSQAFMPLHGERFIVVVAPPGEAVDPARVRAFVTDGRQGVNY
CCCCEEEEEEEHHHCCCCCCCCCCEECCCEEEEEEECCCCCCCHHHEEEEEECCCCCCCC
RAGTWHAIHSVLDVEGEFLVVDRGGAGDNCDEFPLAMRVSLP
CCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MLELTAQPLTAEAFAPFGDVIDRRDADGFPINGGRTQRYHDLARIETLGEGARPLISLFV
CCCCCCCCCCHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
SQPVTLPLTLDFLERHPLGSQAFMPLHGERFIVVVAPPGEAVDPARVRAFVTDGRQGVNY
CCCCEEEEEEEHHHCCCCCCCCCCEECCCEEEEEEECCCCCCCHHHEEEEEECCCCCCCC
RAGTWHAIHSVLDVEGEFLVVDRGGAGDNCDEFPLAMRVSLP
CCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA