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The map label for this gene is opsX [H]

Identifier: 92112152

GI number: 92112152

Start: 19848

End: 20921

Strand: Direct

Name: opsX [H]

Synonym: Csal_0016

Alternate gene names: 92112152

Gene position: 19848-20921 (Clockwise)

Preceding gene: 92112149

Following gene: 92112153

Centisome position: 0.54

GC content: 67.32

Gene sequence:

>1074_bases
GTGCTGCGACTCTCCGCGCTGGGCGATGTCTGCAACCTCGTCCCGACCATTCGCGTGTTGCAGCGCCTATGGCCCGATGC
CCGCATTACCTGGATCATCGGCAAGGGGGAGCACAGTCTACTGGCCGGCCTCTCGGGGGTCGAGTTCATCGTCTACGACA
AGGCCACGGGCCTGGCCGGCATGCGCGAGGTGTGGCGCCAGCTGGGCGACACGCGCTTCGATGTGCTGCTGCACATGCAA
CAGGCGCTGCGCGCGAGCGTGCTCTCGCTGGGGCTCAAGGCCGATCTGCGCATCGGCTATGACAAGGCGCGTGCCAAGGA
CTGGCAGCACTGGTTCACGCACCGCCAACTTACACCTCACCCCCGTGCGCACGTGCTCGACTCCTTCCTCGATTTCGCCC
GTCTGCTGGGCGGTGCCGAGCGAGTCGATGCCGAGCCGCTGCGCTGGGACCTGGCGATTCCCGACACCGCCTACCAGGAA
GCGGCACGCGTGACCGGCGACGCGCCGTATATCGTCATCAGCCCGTGCGCCAATCCACGCTTGCGCAATTTCCGCAACTG
GTCCGCCGAAGGCTACGCCGCCGTGATCTCGCATGCCTGGCAAGAGCATGGCCTGCGCACGGTCATGACCGGAGGCGGCA
GTACCCAGGAGCAGGAAATGGGCGCGCGCATTCGCGCCCTGTGCGCTGAGGAGGCGGTTATCGATGCCATCGGCGCGACC
TCGCTCAAGGGCCTGCTGGCAATGCTCGACCGCGCGCGCATGGTGATCGCCCCGGATTCCGGCCCCGTGCACATGGCCAA
TGCGCTGCGCACCCCCACGTTGGGGCTTTACGCCACGACCAATCCCGAGCGCGCCGCGCCTTATTGCTGGCGCGACTTCG
TGGTCGACCGTTACCCCGATGCCGTGCGTCGCTACCTGCACAAATCGCCGGAGGCCATCACCTGGGGGGCGCGCGTGCGC
CACCCCGATGCCATGAGCCTGATCCACGCCGACGACGTCATCGCGCAGTTCGATGCCTTGCTGAACGCCGCGCCGTCCGC
CTCGTCCCGCCCGGAGCCCGACCATGAAACTTGA

Upstream 100 bases:

>100_bases
ACATAGAATGTCGGCATCATATAGAATGAATGCCTTTCCCGTTTGGAATGTTGCCAACCGCATGAAGCATCCTCTGCCCG
TCCGTCCCGCGCATATCGGC

Downstream 100 bases:

>100_bases
TCTGACCGTCCTCGAACAGGCCCGCTTGCTGGTAGTGGGCGATGTCATGCTCGACCGCTATTGGCATGGCGGCACCTCGC
GCATCTCGCCGGAAGCGCCG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MLRLSALGDVCNLVPTIRVLQRLWPDARITWIIGKGEHSLLAGLSGVEFIVYDKATGLAGMREVWRQLGDTRFDVLLHMQ
QALRASVLSLGLKADLRIGYDKARAKDWQHWFTHRQLTPHPRAHVLDSFLDFARLLGGAERVDAEPLRWDLAIPDTAYQE
AARVTGDAPYIVISPCANPRLRNFRNWSAEGYAAVISHAWQEHGLRTVMTGGGSTQEQEMGARIRALCAEEAVIDAIGAT
SLKGLLAMLDRARMVIAPDSGPVHMANALRTPTLGLYATTNPERAAPYCWRDFVVDRYPDAVRRYLHKSPEAITWGARVR
HPDAMSLIHADDVIAQFDALLNAAPSASSRPEPDHET

Sequences:

>Translated_357_residues
MLRLSALGDVCNLVPTIRVLQRLWPDARITWIIGKGEHSLLAGLSGVEFIVYDKATGLAGMREVWRQLGDTRFDVLLHMQ
QALRASVLSLGLKADLRIGYDKARAKDWQHWFTHRQLTPHPRAHVLDSFLDFARLLGGAERVDAEPLRWDLAIPDTAYQE
AARVTGDAPYIVISPCANPRLRNFRNWSAEGYAAVISHAWQEHGLRTVMTGGGSTQEQEMGARIRALCAEEAVIDAIGAT
SLKGLLAMLDRARMVIAPDSGPVHMANALRTPTLGLYATTNPERAAPYCWRDFVVDRYPDAVRRYLHKSPEAITWGARVR
HPDAMSLIHADDVIAQFDALLNAAPSASSRPEPDHET
>Mature_357_residues
MLRLSALGDVCNLVPTIRVLQRLWPDARITWIIGKGEHSLLAGLSGVEFIVYDKATGLAGMREVWRQLGDTRFDVLLHMQ
QALRASVLSLGLKADLRIGYDKARAKDWQHWFTHRQLTPHPRAHVLDSFLDFARLLGGAERVDAEPLRWDLAIPDTAYQE
AARVTGDAPYIVISPCANPRLRNFRNWSAEGYAAVISHAWQEHGLRTVMTGGGSTQEQEMGARIRALCAEEAVIDAIGAT
SLKGLLAMLDRARMVIAPDSGPVHMANALRTPTLGLYATTNPERAAPYCWRDFVVDRYPDAVRRYLHKSPEAITWGARVR
HPDAMSLIHADDVIAQFDALLNAAPSASSRPEPDHET

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790062, Length=352, Percent_Identity=24.7159090909091, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 39647; Mature: 39647

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRLSALGDVCNLVPTIRVLQRLWPDARITWIIGKGEHSLLAGLSGVEFIVYDKATGLAG
CEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHCCCCCEEEEEECCCCHHH
MREVWRQLGDTRFDVLLHMQQALRASVLSLGLKADLRIGYDKARAKDWQHWFTHRQLTPH
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHCCCCCCC
PRAHVLDSFLDFARLLGGAERVDAEPLRWDLAIPDTAYQEAARVTGDAPYIVISPCANPR
CHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCEEEEECCCCCH
LRNFRNWSAEGYAAVISHAWQEHGLRTVMTGGGSTQEQEMGARIRALCAEEAVIDAIGAT
HHCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SLKGLLAMLDRARMVIAPDSGPVHMANALRTPTLGLYATTNPERAAPYCWRDFVVDRYPD
HHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCHH
AVRRYLHKSPEAITWGARVRHPDAMSLIHADDVIAQFDALLNAAPSASSRPEPDHET
HHHHHHHCCCCEEECCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLRLSALGDVCNLVPTIRVLQRLWPDARITWIIGKGEHSLLAGLSGVEFIVYDKATGLAG
CEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHCCCCCEEEEEECCCCHHH
MREVWRQLGDTRFDVLLHMQQALRASVLSLGLKADLRIGYDKARAKDWQHWFTHRQLTPH
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHCCCCCCC
PRAHVLDSFLDFARLLGGAERVDAEPLRWDLAIPDTAYQEAARVTGDAPYIVISPCANPR
CHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCEEEEECCCCCH
LRNFRNWSAEGYAAVISHAWQEHGLRTVMTGGGSTQEQEMGARIRALCAEEAVIDAIGAT
HHCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SLKGLLAMLDRARMVIAPDSGPVHMANALRTPTLGLYATTNPERAAPYCWRDFVVDRYPD
HHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCHH
AVRRYLHKSPEAITWGARVRHPDAMSLIHADDVIAQFDALLNAAPSASSRPEPDHET
HHHHHHHCCCCEEECCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Transferring other glycosyl groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]