Click here to switch to the map view.

The map label for this gene is glxA [H]

Identifier: 91785802

GI number: 91785802

Start: 4881749

End: 4882684

Strand: Reverse

Name: glxA [H]

Synonym: Bxe_A4475

Alternate gene names: 91785802

Gene position: 4882684-4881749 (Counterclockwise)

Preceding gene: 91785804

Following gene: 91785801

Centisome position: 99.73

GC content: 65.38

Gene sequence:

>936_bases
ATGAGACATATCGGCGTGGTGGTTTTCCCCGGCTTCCAGATTCTCGATATGGTGGCGATCTCGGTGTTCGAACTGGCGAA
CCTGGAGGCCGGCCAGCCGGAGTACGAAGTGGAAGTCATTTCCGAGCATGGCGGAATGGTGCGCAGCTCGGCCGGCGTCG
AGATCGCCACCCGGCCGTTCAGCGATCCGGCGTACGACACCGTGGTGGTCACCGGCGCGATGCAGATCGCGCCGTCGTCG
TCGGGATTGCTGGCGTTTCTGAACGACGCCCTCGCCGCCTCGCGGCGTACCGCCAGCATCTGCACCGGCGCGTTCGTGCT
GGCGGAAGCCGGGATTCTCGACGGCCGCCACGCCACGACCCACTGGATCCACGCGCGCGATCTGCAACGGCGCTTCCCGC
AGGCGCGCGTGGACGAAGACCGCATTTTTATCGTCGACGGTTCGGTGTGGACATCGGCCGGCATGACCGCCTGCATCGAC
CTGTGTCTCGCGCTCGTCGAAAACGATCTCGGCGTGGAAGTTTCGCGCGCTATCGCCAGGAAGCTCGTGGTCTATCACCG
CCGGGCTGGCGGCCAGTCGCAGTTCTCGGCCATGCTGGAACTGGAGCCGAAATCCGATCGCATCCAGAACGCGCTCTCGT
ACGCCAAAAGCCATCTGCGCGAGCCGTTGACGGTCGAACAACTCGCCGACGTCGCGCATCTCAGTCCGCGCCAGTTCAGC
CGCGCCTTTCGCGACGAAACCCGCCAATCCCCAGCCAAAGCCATCGAGGCATTGCGCGTAGAAGCCGCGCGCGCCATGCT
GGAAGCGGGCCGCCACTCTATGGAAGTGGTGGCGGCGGAAACCGGCTTCGTGGATACAGAACGGATGCGCCGCGCGTTTC
TGCGCGCGTTCGGCCAGCCGCCGCAGGCGATCAAACGCGCCGCGCGCGTGATGTAA

Upstream 100 bases:

>100_bases
GCCGCGCGGTTTGCGTGGACATTGCGGTGTTGACGAGGCAAGTGTAGGCGCGTACTCTTTCGTCTCAAATGTCGTATTTA
CCTCGTTTTAGGACATCGCG

Downstream 100 bases:

>100_bases
CACAGGTGATGGACAATACGGGGAACCGCAGCAACATCCGATATGACCTTCCACCATGAGAGGAACGCGATGAACTACGA
CGACAGCAATCCCTTCGCGA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MRHIGVVVFPGFQILDMVAISVFELANLEAGQPEYEVEVISEHGGMVRSSAGVEIATRPFSDPAYDTVVVTGAMQIAPSS
SGLLAFLNDALAASRRTASICTGAFVLAEAGILDGRHATTHWIHARDLQRRFPQARVDEDRIFIVDGSVWTSAGMTACID
LCLALVENDLGVEVSRAIARKLVVYHRRAGGQSQFSAMLELEPKSDRIQNALSYAKSHLREPLTVEQLADVAHLSPRQFS
RAFRDETRQSPAKAIEALRVEAARAMLEAGRHSMEVVAAETGFVDTERMRRAFLRAFGQPPQAIKRAARVM

Sequences:

>Translated_311_residues
MRHIGVVVFPGFQILDMVAISVFELANLEAGQPEYEVEVISEHGGMVRSSAGVEIATRPFSDPAYDTVVVTGAMQIAPSS
SGLLAFLNDALAASRRTASICTGAFVLAEAGILDGRHATTHWIHARDLQRRFPQARVDEDRIFIVDGSVWTSAGMTACID
LCLALVENDLGVEVSRAIARKLVVYHRRAGGQSQFSAMLELEPKSDRIQNALSYAKSHLREPLTVEQLADVAHLSPRQFS
RAFRDETRQSPAKAIEALRVEAARAMLEAGRHSMEVVAAETGFVDTERMRRAFLRAFGQPPQAIKRAARVM
>Mature_311_residues
MRHIGVVVFPGFQILDMVAISVFELANLEAGQPEYEVEVISEHGGMVRSSAGVEIATRPFSDPAYDTVVVTGAMQIAPSS
SGLLAFLNDALAASRRTASICTGAFVLAEAGILDGRHATTHWIHARDLQRRFPQARVDEDRIFIVDGSVWTSAGMTACID
LCLALVENDLGVEVSRAIARKLVVYHRRAGGQSQFSAMLELEPKSDRIQNALSYAKSHLREPLTVEQLADVAHLSPRQFS
RAFRDETRQSPAKAIEALRVEAARAMLEAGRHSMEVVAAETGFVDTERMRRAFLRAFGQPPQAIKRAARVM

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 34068; Mature: 34068

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: PS01124 HTH_ARAC_FAMILY_2 ; PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHIGVVVFPGFQILDMVAISVFELANLEAGQPEYEVEVISEHGGMVRSSAGVEIATRPF
CCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEECCCCCEEEECCC
SDPAYDTVVVTGAMQIAPSSSGLLAFLNDALAASRRTASICTGAFVLAEAGILDGRHATT
CCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCHH
HWIHARDLQRRFPQARVDEDRIFIVDGSVWTSAGMTACIDLCLALVENDLGVEVSRAIAR
HHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
KLVVYHRRAGGQSQFSAMLELEPKSDRIQNALSYAKSHLREPLTVEQLADVAHLSPRQFS
HHHHHHHCCCCHHHHHHHEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHH
RAFRDETRQSPAKAIEALRVEAARAMLEAGRHSMEVVAAETGFVDTERMRRAFLRAFGQP
HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCC
PQAIKRAARVM
HHHHHHHHHCC
>Mature Secondary Structure
MRHIGVVVFPGFQILDMVAISVFELANLEAGQPEYEVEVISEHGGMVRSSAGVEIATRPF
CCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEECCCCCEEEECCC
SDPAYDTVVVTGAMQIAPSSSGLLAFLNDALAASRRTASICTGAFVLAEAGILDGRHATT
CCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCHH
HWIHARDLQRRFPQARVDEDRIFIVDGSVWTSAGMTACIDLCLALVENDLGVEVSRAIAR
HHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
KLVVYHRRAGGQSQFSAMLELEPKSDRIQNALSYAKSHLREPLTVEQLADVAHLSPRQFS
HHHHHHHCCCCHHHHHHHEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHH
RAFRDETRQSPAKAIEALRVEAARAMLEAGRHSMEVVAAETGFVDTERMRRAFLRAFGQP
HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCC
PQAIKRAARVM
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]