| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91785770
Identifier: 91785770
GI number: 91785770
Start: 4843234
End: 4843872
Strand: Reverse
Name: 91785770
Synonym: Bxe_A0003
Alternate gene names: NA
Gene position: 4843872-4843234 (Counterclockwise)
Preceding gene: 91785771
Following gene: 91785769
Centisome position: 98.94
GC content: 63.22
Gene sequence:
>639_bases ATGAGCGAAGGCGTATACGGAGAACAGGCGACCGGGCGGGTGACCCACAGCCTATTGCGATTGAGCACGGCAATGCGGAG CCAGGCTTGGGAATGGGCGGAAGGCGCTGGCCTGACACCGACTCAGGGCGAAATTCTGGTTTTGTTGATGCAGCGCAAAG GCCCGATGCGTCTCGGCGAAATTGCGCGTGAAACGGCGCTCACCGCCGCGACGACCAGCGACGCAGTCAGCACGCTCGAG ACCAAGGGACTGGTCGAAAAGCGCCGTGCCCTCGACGACGGCCGCGCCCTCGCGGTCCGCCTGACGGCACGCGGCCGCAC GGCTGCGAAGCGCGCTGCACAGTGGCCGGACTTTCTGGCCAAGGCGGTCGGCACGCTGCGTGACGAGGAACAGGCCGTGT TCTATCGCACGCTGCTCAAGACCGTTCACCAGCTGGAAGCGCAAGGCACGATTCCGCCGCATCGCATGTGTCTGAGCTGC ACGCACTTCGAGCCGAGCAGGAACCCGAAGAAGACGCCGCATCATTGCGCGTTGCTCGATCTGAAGATGTCGGATACGGA TCTGCGCCTGGATTGCTCGGTGTATGAGACGGCCGACGTTGCCACCCAGAAGAAGACCTGGAAGATCTTCGCCCAATAA
Upstream 100 bases:
>100_bases GTCCGCAGTTGGGCGAGGCTACCCCACACAGGCTACGGGCGCGGTCGGTGAACGGTTCGCCGGCATCGTACGAAAGCTGT AAATAAACCAATCGAAGATT
Downstream 100 bases:
>100_bases GGCGGTTTCTTCCGGGACAATCCGCTACACTGCCGGGCCGGTTCCGGCGGACGGCACATGCCGCCTGTCAGCCGGCCGGT GCCGCGTGGCGGCAAGTCTT
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MSEGVYGEQATGRVTHSLLRLSTAMRSQAWEWAEGAGLTPTQGEILVLLMQRKGPMRLGEIARETALTAATTSDAVSTLE TKGLVEKRRALDDGRALAVRLTARGRTAAKRAAQWPDFLAKAVGTLRDEEQAVFYRTLLKTVHQLEAQGTIPPHRMCLSC THFEPSRNPKKTPHHCALLDLKMSDTDLRLDCSVYETADVATQKKTWKIFAQ
Sequences:
>Translated_212_residues MSEGVYGEQATGRVTHSLLRLSTAMRSQAWEWAEGAGLTPTQGEILVLLMQRKGPMRLGEIARETALTAATTSDAVSTLE TKGLVEKRRALDDGRALAVRLTARGRTAAKRAAQWPDFLAKAVGTLRDEEQAVFYRTLLKTVHQLEAQGTIPPHRMCLSC THFEPSRNPKKTPHHCALLDLKMSDTDLRLDCSVYETADVATQKKTWKIFAQ >Mature_211_residues SEGVYGEQATGRVTHSLLRLSTAMRSQAWEWAEGAGLTPTQGEILVLLMQRKGPMRLGEIARETALTAATTSDAVSTLET KGLVEKRRALDDGRALAVRLTARGRTAAKRAAQWPDFLAKAVGTLRDEEQAVFYRTLLKTVHQLEAQGTIPPHRMCLSCT HFEPSRNPKKTPHHCALLDLKMSDTDLRLDCSVYETADVATQKKTWKIFAQ
Specific function: Unknown
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23502; Mature: 23371
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEGVYGEQATGRVTHSLLRLSTAMRSQAWEWAEGAGLTPTQGEILVLLMQRKGPMRLGE CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHH IARETALTAATTSDAVSTLETKGLVEKRRALDDGRALAVRLTARGRTAAKRAAQWPDFLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHCCHHHHH KAVGTLRDEEQAVFYRTLLKTVHQLEAQGTIPPHRMCLSCTHFEPSRNPKKTPHHCALLD HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEECCCCCCCCCCCCCCCEEEEE LKMSDTDLRLDCSVYETADVATQKKTWKIFAQ EEECCCCEEEEEEHHHHHHHHHCCCCEEEECC >Mature Secondary Structure SEGVYGEQATGRVTHSLLRLSTAMRSQAWEWAEGAGLTPTQGEILVLLMQRKGPMRLGE CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHH IARETALTAATTSDAVSTLETKGLVEKRRALDDGRALAVRLTARGRTAAKRAAQWPDFLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHCCHHHHH KAVGTLRDEEQAVFYRTLLKTVHQLEAQGTIPPHRMCLSCTHFEPSRNPKKTPHHCALLD HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEECCCCCCCCCCCCCCCEEEEE LKMSDTDLRLDCSVYETADVATQKKTWKIFAQ EEECCCCEEEEEEHHHHHHHHHCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA