Click here to switch to the map view.

The map label for this gene is bkdR [H]

Identifier: 91785761

GI number: 91785761

Start: 4835560

End: 4836066

Strand: Reverse

Name: bkdR [H]

Synonym: Bxe_A0012

Alternate gene names: 91785761

Gene position: 4836066-4835560 (Counterclockwise)

Preceding gene: 91785764

Following gene: 91785758

Centisome position: 98.78

GC content: 60.16

Gene sequence:

>507_bases
ATGCGGAAATTCGACATGTTAGAACTGGATCACTTCGATCTTGCACTGCTGGAGGTGCTTCAGCGCTTCGGCCGGGCAAC
CCATCAGCAACTGGCCGAGCAGGTCCCGCTGTCGCCGTCGCAGATTGGACGGCGCTTGCAGCGTCTCGAACAGATGGGCG
TGGTGGACGGCTATCGCGTCGTGTTGCGGCCGGAAAAGCTCGGGCTCGGCGTGACTGCGTTCACCAGTCTGAAATTGAAG
CACCACGGCGATTCGATCATCGAGCAATTCCAGCAACAGATCGACGTGCTGCCAGAAGTGCTCGAATGTCATGCCGTGGT
GGGCGACGCCGACTATCTGCTGCGCATCGTCGCGCCCGATCTGAATTATCTGTCGACGTTCGTGATGAAGAAGCTGATGC
GTGTGCCGGGCGTGGATAGCGTGCGTTCGAATATCGTGCTCACCACCTTCAAGCGCAACGGGCCGCTGCCGCTTGGCCAC
TTGTCGCCGGGCACAGCCGCCGCTTGA

Upstream 100 bases:

>100_bases
ATCGGTGATGCAAGTGTAGAGCGTCGCGTATGCGGAAAGGACGCAAAGACGGCGTTTGAGCGCATGATTATGCAATAATC
GTGCATCAAATGGCTATTCA

Downstream 100 bases:

>100_bases
TGCAGCGGCGGCATGAGGGCAGCGCCGCCCGCGCGGAGTTCGCCACGCGACGCACCGCGCCCAGGTCCTACGCCACCTGT
TTCGGCTCGCTATCGGGACT

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MRKFDMLELDHFDLALLEVLQRFGRATHQQLAEQVPLSPSQIGRRLQRLEQMGVVDGYRVVLRPEKLGLGVTAFTSLKLK
HHGDSIIEQFQQQIDVLPEVLECHAVVGDADYLLRIVAPDLNYLSTFVMKKLMRVPGVDSVRSNIVLTTFKRNGPLPLGH
LSPGTAAA

Sequences:

>Translated_168_residues
MRKFDMLELDHFDLALLEVLQRFGRATHQQLAEQVPLSPSQIGRRLQRLEQMGVVDGYRVVLRPEKLGLGVTAFTSLKLK
HHGDSIIEQFQQQIDVLPEVLECHAVVGDADYLLRIVAPDLNYLSTFVMKKLMRVPGVDSVRSNIVLTTFKRNGPLPLGH
LSPGTAAA
>Mature_168_residues
MRKFDMLELDHFDLALLEVLQRFGRATHQQLAEQVPLSPSQIGRRLQRLEQMGVVDGYRVVLRPEKLGLGVTAFTSLKLK
HHGDSIIEQFQQQIDVLPEVLECHAVVGDADYLLRIVAPDLNYLSTFVMKKLMRVPGVDSVRSNIVLTTFKRNGPLPLGH
LSPGTAAA

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=149, Percent_Identity=34.2281879194631, Blast_Score=102, Evalue=1e-23,
Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=35.3333333333333, Blast_Score=96, Evalue=1e-21,
Organism=Escherichia coli, GI1790182, Length=139, Percent_Identity=25.8992805755396, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 18807; Mature: 18807

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKFDMLELDHFDLALLEVLQRFGRATHQQLAEQVPLSPSQIGRRLQRLEQMGVVDGYRV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEE
VLRPEKLGLGVTAFTSLKLKHHGDSIIEQFQQQIDVLPEVLECHAVVGDADYLLRIVAPD
EEEHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC
LNYLSTFVMKKLMRVPGVDSVRSNIVLTTFKRNGPLPLGHLSPGTAAA
HHHHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRKFDMLELDHFDLALLEVLQRFGRATHQQLAEQVPLSPSQIGRRLQRLEQMGVVDGYRV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEE
VLRPEKLGLGVTAFTSLKLKHHGDSIIEQFQQQIDVLPEVLECHAVVGDADYLLRIVAPD
EEEHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC
LNYLSTFVMKKLMRVPGVDSVRSNIVLTTFKRNGPLPLGHLSPGTAAA
HHHHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]