| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is insJ [H]
Identifier: 91785701
GI number: 91785701
Start: 4762863
End: 4763390
Strand: Reverse
Name: insJ [H]
Synonym: Bxe_A0073
Alternate gene names: 91785701
Gene position: 4763390-4762863 (Counterclockwise)
Preceding gene: 91785702
Following gene: 91785700
Centisome position: 97.29
GC content: 53.98
Gene sequence:
>528_bases GTGAGGAAATTCGATGTAAAGTTTAAGGGGAAGGTGGTTCGCGAGTATCTCGCTGGCAAAGGGGGCTATAAGCTCCTTGC GGCGAAGTTCGGTATTGCTGAAAGCATGGTGAGGCGATGGGTCGCGGCATATCGTCACCATGGTAACGCTGGGCTCATCC GCCAGCGTGGCGCTTACACCCTTGAGTTCAAGCTTGAGGTGGTGCACCGGGGCGTGGCTGAGAACCTTTCCTGTCGAGAG CTGGCTGCCATTTACAATATCGGCAATCCGCACAGCATCACGATGTGGCAACAACAGAAAGCACGGGGAGAGCTCCGTTC GCTAAAGGGCATGCACCCGTCGGGACAGGATGTTTCGGTGCCAGCAAAGAAAAAGACCTCGAACCAGTCGTTAGAAGCTC CGCGATCTGAGGAGTCAGACCAACTGCTTCGTGAGAATCAGCAGTTACGCGCGGAGGTCGCGTACCTAAAAAAATTCAAT GCCTTGGTTCTAGCAAAGAAGTTGGCGCGGCAGAAAGAGCCAAAATAG
Upstream 100 bases:
>100_bases AGAGGGGCGCAGGTTGGAGCGAGTGCATGAGCCTTACTCGTTCTGAACCGCCCCGGATTTGAATTGACCCCCGAGAGTTG GACACAACCTTGGAGGCTCC
Downstream 100 bases:
>100_bases TGCTTGAACTGAGGCAGGAATTCCCCTTGGCCGACCTTCTCCGGGCTGCGGGGTTGCCACGCAGTACGTACTACTATCGG GCCAAGACGTTGGCCGCCCC
Product: putative ISRSO11-transposase orfA protein
Products: NA
Alternate protein names: ORFA [H]
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MRKFDVKFKGKVVREYLAGKGGYKLLAAKFGIAESMVRRWVAAYRHHGNAGLIRQRGAYTLEFKLEVVHRGVAENLSCRE LAAIYNIGNPHSITMWQQQKARGELRSLKGMHPSGQDVSVPAKKKTSNQSLEAPRSEESDQLLRENQQLRAEVAYLKKFN ALVLAKKLARQKEPK
Sequences:
>Translated_175_residues MRKFDVKFKGKVVREYLAGKGGYKLLAAKFGIAESMVRRWVAAYRHHGNAGLIRQRGAYTLEFKLEVVHRGVAENLSCRE LAAIYNIGNPHSITMWQQQKARGELRSLKGMHPSGQDVSVPAKKKTSNQSLEAPRSEESDQLLRENQQLRAEVAYLKKFN ALVLAKKLARQKEPK >Mature_175_residues MRKFDVKFKGKVVREYLAGKGGYKLLAAKFGIAESMVRRWVAAYRHHGNAGLIRQRGAYTLEFKLEVVHRGVAENLSCRE LAAIYNIGNPHSITMWQQQKARGELRSLKGMHPSGQDVSVPAKKKTSNQSLEAPRSEESDQLLRENQQLRAEVAYLKKFN ALVLAKKLARQKEPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IS150/IS1296 orfA family [H]
Homologues:
Organism=Escherichia coli, GI1789980, Length=165, Percent_Identity=30.3030303030303, Blast_Score=71, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011991 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19845; Mature: 19845
Theoretical pI: Translated: 10.89; Mature: 10.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKFDVKFKGKVVREYLAGKGGYKLLAAKFGIAESMVRRWVAAYRHHGNAGLIRQRGAYT CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEE LEFKLEVVHRGVAENLSCRELAAIYNIGNPHSITMWQQQKARGELRSLKGMHPSGQDVSV EEEEHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCC PAKKKTSNQSLEAPRSEESDQLLRENQQLRAEVAYLKKFNALVLAKKLARQKEPK CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRKFDVKFKGKVVREYLAGKGGYKLLAAKFGIAESMVRRWVAAYRHHGNAGLIRQRGAYT CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEE LEFKLEVVHRGVAENLSCRELAAIYNIGNPHSITMWQQQKARGELRSLKGMHPSGQDVSV EEEEHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCC PAKKKTSNQSLEAPRSEESDQLLRENQQLRAEVAYLKKFNALVLAKKLARQKEPK CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2841644; 2541046; 8041620; 9278503 [H]