| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91785689
Identifier: 91785689
GI number: 91785689
Start: 4748153
End: 4748674
Strand: Reverse
Name: 91785689
Synonym: Bxe_A0088
Alternate gene names: NA
Gene position: 4748674-4748153 (Counterclockwise)
Preceding gene: 91785690
Following gene: 91785688
Centisome position: 96.99
GC content: 51.92
Gene sequence:
>522_bases ATGTACAAAACAATCCGATTGATTTTAACTGCATCAGTCATGATGCTGTCCAACCTTGTGCACGCGCAATCAGTGCCGCC TCTCATGGGCGCAAGCCAGTTTGCCGGCCCATATCTCGGCTTCAAGGTAGGTGTGAATAGCTCCAACGCTTCCGGTGTCA TCAGCAAAGCATCGCACACTACAGTTTTCCCCGGCTTCACGGCCGGATATAACTTCGACGTCAACCGGTTCGTGGTGGGC GCCGAGGCCTTTGCCGATTTACATCACGGCTCGACAACCTGTAAGGACGGCGGAATCGATGCAAAATTCGGCATGCCGTT CAATCAGGTATTGCCTTATGTCCGCATCGGATTCACCGGAGACGATCCAGACACGCGCTTCCATTGGGGCCTGGGCGTCG AATATAAATTTGCCAGACACATAAGCGCCGTAGGCGAATGGACAACTGACACCAGCAACCACGACGGCACCAAAAGAACA AATAACAGTTTCACAATCGGTCTGCAGTATCACTTCAATTGA
Upstream 100 bases:
>100_bases AGCGTGGACATTCCCGGAGCGGCATTTCAGCAATCGCTTCCCCAATTAATAAAAAGGCTTTCGCGAAACCATCCGCACGC CAGTGTTTTATTTGCAGGTC
Downstream 100 bases:
>100_bases TCTGCCCGATTAGCGGCGGGGCGGCGAGTTTCCAAGGCCCCCGCCGCCCCGCCGCTATTTCACCCTGCCAAGGTTGTTGA AAGCGTCCCATGCCGTTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: OmpA Domain-Containing Protein
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MYKTIRLILTASVMMLSNLVHAQSVPPLMGASQFAGPYLGFKVGVNSSNASGVISKASHTTVFPGFTAGYNFDVNRFVVG AEAFADLHHGSTTCKDGGIDAKFGMPFNQVLPYVRIGFTGDDPDTRFHWGLGVEYKFARHISAVGEWTTDTSNHDGTKRT NNSFTIGLQYHFN
Sequences:
>Translated_173_residues MYKTIRLILTASVMMLSNLVHAQSVPPLMGASQFAGPYLGFKVGVNSSNASGVISKASHTTVFPGFTAGYNFDVNRFVVG AEAFADLHHGSTTCKDGGIDAKFGMPFNQVLPYVRIGFTGDDPDTRFHWGLGVEYKFARHISAVGEWTTDTSNHDGTKRT NNSFTIGLQYHFN >Mature_173_residues MYKTIRLILTASVMMLSNLVHAQSVPPLMGASQFAGPYLGFKVGVNSSNASGVISKASHTTVFPGFTAGYNFDVNRFVVG AEAFADLHHGSTTCKDGGIDAKFGMPFNQVLPYVRIGFTGDDPDTRFHWGLGVEYKFARHISAVGEWTTDTSNHDGTKRT NNSFTIGLQYHFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18845; Mature: 18845
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKTIRLILTASVMMLSNLVHAQSVPPLMGASQFAGPYLGFKVGVNSSNASGVISKASHT CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEEEEECCCCCCCCEEECCCCC TVFPGFTAGYNFDVNRFVVGAEAFADLHHGSTTCKDGGIDAKFGMPFNQVLPYVRIGFTG EECCCCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCEEEEEECC DDPDTRFHWGLGVEYKFARHISAVGEWTTDTSNHDGTKRTNNSFTIGLQYHFN CCCCCEEEECCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECC >Mature Secondary Structure MYKTIRLILTASVMMLSNLVHAQSVPPLMGASQFAGPYLGFKVGVNSSNASGVISKASHT CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEEEEECCCCCCCCEEECCCCC TVFPGFTAGYNFDVNRFVVGAEAFADLHHGSTTCKDGGIDAKFGMPFNQVLPYVRIGFTG EECCCCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCEEEEEECC DDPDTRFHWGLGVEYKFARHISAVGEWTTDTSNHDGTKRTNNSFTIGLQYHFN CCCCCEEEECCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA