| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91785688
Identifier: 91785688
GI number: 91785688
Start: 4746767
End: 4747777
Strand: Reverse
Name: 91785688
Synonym: Bxe_A0089
Alternate gene names: NA
Gene position: 4747777-4746767 (Counterclockwise)
Preceding gene: 91785689
Following gene: 91785685
Centisome position: 96.98
GC content: 65.38
Gene sequence:
>1011_bases ATGACCGGTCTCCTGCTCGAACTCGCCGTCATGCTGGTGGTCATTCTGGTGGCCGCCGAACTCTTCACCAACGCACTCGA ACACCTGGGCGAGCGTCTCAGGATTTCCGAGGGCGTGACGGGCTCGTTATTCGCCGCGGTCGGCACCGCTTTGCCCGAGA CCCTCGTGCCGCTGCTGGCAATCGCCGGCGGCACGACCGATAGCGCGGTCAATCAGGAGATCGGCGTGGGCGCGATTCTC GGCGCGCCGCTGATGCTCTCCACGCTCTCCACCTTCCTCATGACACTCGCGATCCTCGGTTCGCGCGGCGCGAGCGGCTG GGTCGCGCCGGAACGCACGGGCTTTACGCGCGACCTCAACTACTTCCTGTGCGCGTTCGTACTGGCCGCGGCGGCAATGT ACGTGCCGCACGAGCAGATGCTCGTGCGTGCCCTCTTCAGCGCGGCGCTGGTCGGCGTATACGTCACGTATGTGGTGATG ACCTTCCGGGCATCGAATCAATTGGTCGATGCCGGTCACGGCACCGAAGCGCCGGGCAAGATGCTGATCTCGCGTCTCGG CGTGCCGACCAACCTCGTGACGATCGTGGCGCAACTGGCGCTCGCCGTGGCACTGCTGGTGTGGGGCGCGGAGGGCTTCA TCCACGGTGTTCGCGGCGTGTCGCAGGCGCTCGGTATCTCGCCGCTGCTGCTCTCGCTGCTGATCATACCGATCGCCACC GAACTGCCGGAGAAGGTCAACAGCATTCTGTGGATTCGCCGCGGCAAGGATACGCTGGCGTTCGGCAACATCACCGGTGC GATGGTGTTCCAGGGCACCTTGCTGCCCGCGATCGGCATTCTGCTGACGCCGTGGACGCCGCGTATCGAAGTGGTGACCG GCATCGTGATCACGCTCGCTGCCGCGGCCTGGCTGCGGATCAATGTGCGCGCGCGCGGTGTGCCGGTGTGGGCGCTGCTG GTTTGCGGCGTGCTGTATGCGACCTATCTGGTCATTACGCTGACTCGCTAG
Upstream 100 bases:
>100_bases GACCGTGGAGTTGCCTCGTGATACATCGTTGTGCCCTGCCAGTCTTCCCCGCTCGCCGTCTGCCACGCCGCCACCTTTCC GTGCTTGCGGGGAGCAGCGT
Downstream 100 bases:
>100_bases ACGCGCCGCTCAACGAGCCGCCTGGCGGCAAGCGGAACGATCGCAGAAGGCAGCCCACTGGCAGACCTTCTGCGCTTCTC GCTCACTTGACCGTTGCACC
Product: sodium/calcium antiporter
Products: NA
Alternate protein names: Ca2+/Na+ Antiporter; Sodium/Calcium Antiporter; Sodium/Calcium Exchanger Protein; Sodium/Calcium Exchanger; Cation Antiporter; Inner Membrane Protein; Na+/Ca+ Exchanger Protein; Ca2+Cation Antiporter CaCA Family; Sodium/Calcium Exchanger Family Protein; Ca2+/H+ Antiporter
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MTGLLLELAVMLVVILVAAELFTNALEHLGERLRISEGVTGSLFAAVGTALPETLVPLLAIAGGTTDSAVNQEIGVGAIL GAPLMLSTLSTFLMTLAILGSRGASGWVAPERTGFTRDLNYFLCAFVLAAAAMYVPHEQMLVRALFSAALVGVYVTYVVM TFRASNQLVDAGHGTEAPGKMLISRLGVPTNLVTIVAQLALAVALLVWGAEGFIHGVRGVSQALGISPLLLSLLIIPIAT ELPEKVNSILWIRRGKDTLAFGNITGAMVFQGTLLPAIGILLTPWTPRIEVVTGIVITLAAAAWLRINVRARGVPVWALL VCGVLYATYLVITLTR
Sequences:
>Translated_336_residues MTGLLLELAVMLVVILVAAELFTNALEHLGERLRISEGVTGSLFAAVGTALPETLVPLLAIAGGTTDSAVNQEIGVGAIL GAPLMLSTLSTFLMTLAILGSRGASGWVAPERTGFTRDLNYFLCAFVLAAAAMYVPHEQMLVRALFSAALVGVYVTYVVM TFRASNQLVDAGHGTEAPGKMLISRLGVPTNLVTIVAQLALAVALLVWGAEGFIHGVRGVSQALGISPLLLSLLIIPIAT ELPEKVNSILWIRRGKDTLAFGNITGAMVFQGTLLPAIGILLTPWTPRIEVVTGIVITLAAAAWLRINVRARGVPVWALL VCGVLYATYLVITLTR >Mature_335_residues TGLLLELAVMLVVILVAAELFTNALEHLGERLRISEGVTGSLFAAVGTALPETLVPLLAIAGGTTDSAVNQEIGVGAILG APLMLSTLSTFLMTLAILGSRGASGWVAPERTGFTRDLNYFLCAFVLAAAAMYVPHEQMLVRALFSAALVGVYVTYVVMT FRASNQLVDAGHGTEAPGKMLISRLGVPTNLVTIVAQLALAVALLVWGAEGFIHGVRGVSQALGISPLLLSLLIIPIATE LPEKVNSILWIRRGKDTLAFGNITGAMVFQGTLLPAIGILLTPWTPRIEVVTGIVITLAAAAWLRINVRARGVPVWALLV CGVLYATYLVITLTR
Specific function: Unknown
COG id: COG0530
COG function: function code P; Ca2+/Na+ antiporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35402; Mature: 35271
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGLLLELAVMLVVILVAAELFTNALEHLGERLRISEGVTGSLFAAVGTALPETLVPLLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH IAGGTTDSAVNQEIGVGAILGAPLMLSTLSTFLMTLAILGSRGASGWVAPERTGFTRDLN HCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH YFLCAFVLAAAAMYVPHEQMLVRALFSAALVGVYVTYVVMTFRASNQLVDAGHGTEAPGK HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHH MLISRLGVPTNLVTIVAQLALAVALLVWGAEGFIHGVRGVSQALGISPLLLSLLIIPIAT HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH ELPEKVNSILWIRRGKDTLAFGNITGAMVFQGTLLPAIGILLTPWTPRIEVVTGIVITLA HHHHHHHHHEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH AAAWLRINVRARGVPVWALLVCGVLYATYLVITLTR HHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TGLLLELAVMLVVILVAAELFTNALEHLGERLRISEGVTGSLFAAVGTALPETLVPLLA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH IAGGTTDSAVNQEIGVGAILGAPLMLSTLSTFLMTLAILGSRGASGWVAPERTGFTRDLN HCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH YFLCAFVLAAAAMYVPHEQMLVRALFSAALVGVYVTYVVMTFRASNQLVDAGHGTEAPGK HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHH MLISRLGVPTNLVTIVAQLALAVALLVWGAEGFIHGVRGVSQALGISPLLLSLLIIPIAT HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH ELPEKVNSILWIRRGKDTLAFGNITGAMVFQGTLLPAIGILLTPWTPRIEVVTGIVITLA HHHHHHHHHEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH AAAWLRINVRARGVPVWALLVCGVLYATYLVITLTR HHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA