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The map label for this gene is flgD [H]

Identifier: 91785635

GI number: 91785635

Start: 4693960

End: 4694682

Strand: Reverse

Name: flgD [H]

Synonym: Bxe_A0142

Alternate gene names: 91785635

Gene position: 4694682-4693960 (Counterclockwise)

Preceding gene: 91785636

Following gene: 91785634

Centisome position: 95.89

GC content: 66.25

Gene sequence:

>723_bases
TTGACCACCAACACCACCATCGGCAGCAACGGCACGAATGTGTCGCAAACGCTGCTCGATACGATGAACGGTACGAACAG
TGCCTCGAGCTCCACCAGCTCGACGGGCAGCACTTCGGGCACGTCGGCGACCGATCTGCAGAACACCTTCCTGCAACTGC
TCGTCGCACAGTTGAAGAACCAGGATCCGACCAATCCGATGGACAGCTCGCAGATGACCTCGCAGCTGGCGCAGATCAAC
ACGGTCTCGGGCATCAGTCAGCTGAACACGACGCTCACCTCGCTCGCCACGCAGATGTCGGCGGGCCAGCAGTCGCAGGC
CGCGCTGCTGATCGGCTCGACCGTGCTGGCGCCGGGCAGTTCGGTTTCGGTCGCGAGCGGCAAGGCCGGCGCGTTCGGCG
TGCAGCTCGCCAACCCGGTGGGCGACCTGCAGGTGGTGGTGAAGAACTCGTCGGGCCAGATCGTCAGCACGCTCGACCTC
GGCAAGCAGTCGGCGGGCACGATTCCGGTGGGCTGGACGCCGACCGATTCGGCCGGCAACGCGCTGCCCGACGGCACGTA
CACGATCAGCGCGGTCGGCACGATCAACGGTCAGCAGGCCACGGCCACCACGCTCACGGGCGCAACGGTGCAAAGCGTCG
TCATGCAGGCCAACGGCACGCCGGGCCTCGTGCTGTCGAACGGCTCGACGGTCGGCTTGACCAGCGTCGCCGCCATCCTC
TGA

Upstream 100 bases:

>100_bases
ATCTCGGCCTCGCGCTCGTATCAGGCCAACGTGGAGACCTTGAACACCGCCAAGACCCTGATGCTGAAAACGCTCACGAT
CGGAACCTGAGGAGAGCTCC

Downstream 100 bases:

>100_bases
TTCAGATTCAGTCAGTCACGACTTTCCAGATACGGAGACCGTCATGGGTTACCAACAAGGTTTGAGCGGTTTGTCGGCAT
CGTCGAGCGATCTCGATGTG

Product: flagellar basal body rod modification protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MTTNTTIGSNGTNVSQTLLDTMNGTNSASSSTSSTGSTSGTSATDLQNTFLQLLVAQLKNQDPTNPMDSSQMTSQLAQIN
TVSGISQLNTTLTSLATQMSAGQQSQAALLIGSTVLAPGSSVSVASGKAGAFGVQLANPVGDLQVVVKNSSGQIVSTLDL
GKQSAGTIPVGWTPTDSAGNALPDGTYTISAVGTINGQQATATTLTGATVQSVVMQANGTPGLVLSNGSTVGLTSVAAIL

Sequences:

>Translated_240_residues
MTTNTTIGSNGTNVSQTLLDTMNGTNSASSSTSSTGSTSGTSATDLQNTFLQLLVAQLKNQDPTNPMDSSQMTSQLAQIN
TVSGISQLNTTLTSLATQMSAGQQSQAALLIGSTVLAPGSSVSVASGKAGAFGVQLANPVGDLQVVVKNSSGQIVSTLDL
GKQSAGTIPVGWTPTDSAGNALPDGTYTISAVGTINGQQATATTLTGATVQSVVMQANGTPGLVLSNGSTVGLTSVAAIL
>Mature_239_residues
TTNTTIGSNGTNVSQTLLDTMNGTNSASSSTSSTGSTSGTSATDLQNTFLQLLVAQLKNQDPTNPMDSSQMTSQLAQINT
VSGISQLNTTLTSLATQMSAGQQSQAALLIGSTVLAPGSSVSVASGKAGAFGVQLANPVGDLQVVVKNSSGQIVSTLDLG
KQSAGTIPVGWTPTDSAGNALPDGTYTISAVGTINGQQATATTLTGATVQSVVMQANGTPGLVLSNGSTVGLTSVAAIL

Specific function: Required for flagellar hook formation. May act as a scaffolding protein [H]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgD family [H]

Homologues:

Organism=Escherichia coli, GI1787315, Length=179, Percent_Identity=43.5754189944134, Blast_Score=132, Evalue=2e-32,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005648 [H]

Pfam domain/function: PF03963 FlgD [H]

EC number: NA

Molecular weight: Translated: 23713; Mature: 23581

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTNTTIGSNGTNVSQTLLDTMNGTNSASSSTSSTGSTSGTSATDLQNTFLQLLVAQLKN
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
QDPTNPMDSSQMTSQLAQINTVSGISQLNTTLTSLATQMSAGQQSQAALLIGSTVLAPGS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEECCCC
SVSVASGKAGAFGVQLANPVGDLQVVVKNSSGQIVSTLDLGKQSAGTIPVGWTPTDSAGN
CEEECCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCEECCCCCCCCCCC
ALPDGTYTISAVGTINGQQATATTLTGATVQSVVMQANGTPGLVLSNGSTVGLTSVAAIL
CCCCCCEEEEEEEECCCCCCEEEEECHHHHHHHHHHCCCCCCEEEECCCEECHHHHHHHC
>Mature Secondary Structure 
TTNTTIGSNGTNVSQTLLDTMNGTNSASSSTSSTGSTSGTSATDLQNTFLQLLVAQLKN
CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
QDPTNPMDSSQMTSQLAQINTVSGISQLNTTLTSLATQMSAGQQSQAALLIGSTVLAPGS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEECCCC
SVSVASGKAGAFGVQLANPVGDLQVVVKNSSGQIVSTLDLGKQSAGTIPVGWTPTDSAGN
CEEECCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCEECCCCCCCCCCC
ALPDGTYTISAVGTINGQQATATTLTGATVQSVVMQANGTPGLVLSNGSTVGLTSVAAIL
CCCCCCEEEEEEEECCCCCCEEEEECHHHHHHHHHHCCCCCCEEEECCCEECHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]