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The map label for this gene is flgF [H]

Identifier: 91785633

GI number: 91785633

Start: 4691626

End: 4692384

Strand: Reverse

Name: flgF [H]

Synonym: Bxe_A0144

Alternate gene names: 91785633

Gene position: 4692384-4691626 (Counterclockwise)

Preceding gene: 91785634

Following gene: 91785632

Centisome position: 95.84

GC content: 66.27

Gene sequence:

>759_bases
ATGGATCGGCTGATCTACACCGCGATGTCGGGCAGCACGCAGGCGCTCGAACAGCAGGCTATCGTCGCGAACAACCTGGC
CAACGCATCGACCACCGGTTTTCGCGCGCAACTGGCGACTTTCCGTGCCGTGCCGATGTCGTTCGGCGACGGCAGTTCGA
TCAACGACAACACCACCCGCACCTTCGTGCTGTCGTCGACGCCGGGCGCGGACTACACGCCCGGGCCGATCCAGCAGACG
GGCAACCCGCTCGACGTGGCGATCCAGGGGCCGGGCTGGCTCGCGGTGCAAACCGCTGACGGCGGCGAGGCTTACACGCG
CGCCGGCAATCTGCATATCGACGAAAACGGTCAACTGGTGAACGCCACCAATCAGGTGGTGCTCGGCAACGGCGGGCCGG
TCTCGGTGCCGCCGGGCGCGGAGATCACCATCGGCAAGGACGGCACGGTGTCCGCGCTGACGCCGGGCGATCCGCCCACC
GCGGTGGTGACGGTCGATCAGCTGAAGCTGGTGAATCCGGATCCGCAAACCATGACGCGCGGCGACGACGGCCTCTTTCG
TACCGGCGACGGCAACCCTGCCGATGCCGATCCGACCGTCACGCTGGCGCCGGCGTCGCTGGAGGGCAGCAACGTGAATC
CGGTGAGCGCGATGGTCTCGATGATCACCAACGCGCGCCAGTTCCAGATGCAGACCAAGCTGCTGGAAAGCGCCGACAAG
AACGACCAGTCCGCCAACCAGCTGCTCAGCTTCAGCTAA

Upstream 100 bases:

>100_bases
CCGCGCAGCGCAACTATCAGGCGAACGCGCAGACGATCAAGACCCAGCAGACCGTCGACCAGACCCTGATCAACCTGTAA
GCGACCGGGACCCACCCATC

Downstream 100 bases:

>100_bases
CGGGCGCTCAGGCGCCTTGGAGAAGAATAGTGAATCGCTCACTCTACATCGCCGCAACCGGCATGAATGCGCAGCAGGCG
CAGATGGACGTGATCTCGAA

Product: flagellar basal body rod protein FlgF

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MDRLIYTAMSGSTQALEQQAIVANNLANASTTGFRAQLATFRAVPMSFGDGSSINDNTTRTFVLSSTPGADYTPGPIQQT
GNPLDVAIQGPGWLAVQTADGGEAYTRAGNLHIDENGQLVNATNQVVLGNGGPVSVPPGAEITIGKDGTVSALTPGDPPT
AVVTVDQLKLVNPDPQTMTRGDDGLFRTGDGNPADADPTVTLAPASLEGSNVNPVSAMVSMITNARQFQMQTKLLESADK
NDQSANQLLSFS

Sequences:

>Translated_252_residues
MDRLIYTAMSGSTQALEQQAIVANNLANASTTGFRAQLATFRAVPMSFGDGSSINDNTTRTFVLSSTPGADYTPGPIQQT
GNPLDVAIQGPGWLAVQTADGGEAYTRAGNLHIDENGQLVNATNQVVLGNGGPVSVPPGAEITIGKDGTVSALTPGDPPT
AVVTVDQLKLVNPDPQTMTRGDDGLFRTGDGNPADADPTVTLAPASLEGSNVNPVSAMVSMITNARQFQMQTKLLESADK
NDQSANQLLSFS
>Mature_252_residues
MDRLIYTAMSGSTQALEQQAIVANNLANASTTGFRAQLATFRAVPMSFGDGSSINDNTTRTFVLSSTPGADYTPGPIQQT
GNPLDVAIQGPGWLAVQTADGGEAYTRAGNLHIDENGQLVNATNQVVLGNGGPVSVPPGAEITIGKDGTVSALTPGDPPT
AVVTVDQLKLVNPDPQTMTRGDDGLFRTGDGNPADADPTVTLAPASLEGSNVNPVSAMVSMITNARQFQMQTKLLESADK
NDQSANQLLSFS

Specific function: Unknown

COG id: COG4787

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787317, Length=258, Percent_Identity=53.8759689922481, Blast_Score=247, Evalue=4e-67,
Organism=Escherichia coli, GI1787318, Length=256, Percent_Identity=33.203125, Blast_Score=95, Evalue=5e-21,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 26075; Mature: 26075

Theoretical pI: Translated: 4.04; Mature: 4.04

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRLIYTAMSGSTQALEQQAIVANNLANASTTGFRAQLATFRAVPMSFGDGSSINDNTTR
CCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHEEEEEEEEEEEECCCCCCCCCCCEE
TFVLSSTPGADYTPGPIQQTGNPLDVAIQGPGWLAVQTADGGEAYTRAGNLHIDENGQLV
EEEEECCCCCCCCCCCHHHCCCEEEEEEECCCEEEEEECCCCCCEEECCCEEECCCCCEE
NATNQVVLGNGGPVSVPPGAEITIGKDGTVSALTPGDPPTAVVTVDQLKLVNPDPQTMTR
ECCCEEEECCCCCCCCCCCCEEEECCCCCEEEECCCCCCEEEEEEEEEEEECCCCHHCCC
GDDGLFRTGDGNPADADPTVTLAPASLEGSNVNPVSAMVSMITNARQFQMQTKLLESADK
CCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCC
NDQSANQLLSFS
CCCCHHHHCCCC
>Mature Secondary Structure
MDRLIYTAMSGSTQALEQQAIVANNLANASTTGFRAQLATFRAVPMSFGDGSSINDNTTR
CCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHEEEEEEEEEEEECCCCCCCCCCCEE
TFVLSSTPGADYTPGPIQQTGNPLDVAIQGPGWLAVQTADGGEAYTRAGNLHIDENGQLV
EEEEECCCCCCCCCCCHHHCCCEEEEEEECCCEEEEEECCCCCCEEECCCEEECCCCCEE
NATNQVVLGNGGPVSVPPGAEITIGKDGTVSALTPGDPPTAVVTVDQLKLVNPDPQTMTR
ECCCEEEECCCCCCCCCCCCEEEECCCCCEEEECCCCCCEEEEEEEEEEEECCCCHHCCC
GDDGLFRTGDGNPADADPTVTLAPASLEGSNVNPVSAMVSMITNARQFQMQTKLLESADK
CCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCC
NDQSANQLLSFS
CCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2129540; 11677609; 2193164; 2181149 [H]