Click here to switch to the map view.

The map label for this gene is flgH [H]

Identifier: 91785631

GI number: 91785631

Start: 4689991

End: 4690695

Strand: Reverse

Name: flgH [H]

Synonym: Bxe_A0146

Alternate gene names: 91785631

Gene position: 4690695-4689991 (Counterclockwise)

Preceding gene: 91785632

Following gene: 91785630

Centisome position: 95.81

GC content: 62.98

Gene sequence:

>705_bases
ATGATGATGTCGCACCTCACTCGCAATCCGGTTCATTCGCGCACCGCGCAGGCGCTCGTGCAGCTCACGCTGCTCGCGGC
CCTGGGTGGCTGCGGCCTCGTGCCCAAGCAGCCGATCACGCAGCAGCCGATGACGGCGCTGCCGCCGATGCCGCCGCAGG
CGCAGTCGCCGGGCTCGATCTTCAACCCCGGTTACGCAGGCCGGCCGTTGTTCGAAGACCAGCGCCCGCGCAATGTCGGC
GACATCCTGACCATCGTGATTCAGGAAAACGTTAACGCAACCAAGTCGTCGGGCGCCAACGCGAACCGCTCGGGCAACAC
CAACTTCAACGTGCCGACGGCGGGCTTCCTTGGCGGCCTGTTCGGCAAGACCAATCTGAGCGCCACGGGCGCCAATGTAT
TCAGCGGCACCGGCGGCGCGAACGCGTCGAATACGTTCAACGGCACGATCACCGTGACGGTGACGGGCGTGCTGCCGAAC
GGCAACCTGATGGTGAGCGGCGAAAAGCAGATGCTGATCAATCAGGGCGATGAGTTCGTGCGCTTCTCCGGCGTGGTGAA
TCCGAACACGATCTCCAATCTGAACGCCGTCTACTCGACCCAGGTGGCCGACGCGAAGATCGAATATTCCGCGAAGGGTT
ATCTCAACGAAGCCGAGAATATGGGCTGGTTGCAGCGCTTCTTCCTCAACGTGTCGCCGTGGTGA

Upstream 100 bases:

>100_bases
TGGCAATGAATAGCGCCCCCCACCCTGCTGCTTCGCGCCAGGCCCTCCAAGGGCGGGCGAGAAAACTTGGGGTGGCCCGG
CGTTTTCTCGAAAGGCAGTA

Downstream 100 bases:

>100_bases
TCATGCGTACCGTCTTCTTTCGCTCCGGCCGCCTCAACCGCTTCGCGCGAGTCGTTCAGCTCGGCCGCGCGGTGGCGCTA
CTCGTGCTCGCCTGCGCGGC

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MMMSHLTRNPVHSRTAQALVQLTLLAALGGCGLVPKQPITQQPMTALPPMPPQAQSPGSIFNPGYAGRPLFEDQRPRNVG
DILTIVIQENVNATKSSGANANRSGNTNFNVPTAGFLGGLFGKTNLSATGANVFSGTGGANASNTFNGTITVTVTGVLPN
GNLMVSGEKQMLINQGDEFVRFSGVVNPNTISNLNAVYSTQVADAKIEYSAKGYLNEAENMGWLQRFFLNVSPW

Sequences:

>Translated_234_residues
MMMSHLTRNPVHSRTAQALVQLTLLAALGGCGLVPKQPITQQPMTALPPMPPQAQSPGSIFNPGYAGRPLFEDQRPRNVG
DILTIVIQENVNATKSSGANANRSGNTNFNVPTAGFLGGLFGKTNLSATGANVFSGTGGANASNTFNGTITVTVTGVLPN
GNLMVSGEKQMLINQGDEFVRFSGVVNPNTISNLNAVYSTQVADAKIEYSAKGYLNEAENMGWLQRFFLNVSPW
>Mature_234_residues
MMMSHLTRNPVHSRTAQALVQLTLLAALGGCGLVPKQPITQQPMTALPPMPPQAQSPGSIFNPGYAGRPLFEDQRPRNVG
DILTIVIQENVNATKSSGANANRSGNTNFNVPTAGFLGGLFGKTNLSATGANVFSGTGGANASNTFNGTITVTVTGVLPN
GNLMVSGEKQMLINQGDEFVRFSGVVNPNTISNLNAVYSTQVADAKIEYSAKGYLNEAENMGWLQRFFLNVSPW

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=235, Percent_Identity=56.5957446808511, Blast_Score=230, Evalue=5e-62,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 24772; Mature: 24772

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMSHLTRNPVHSRTAQALVQLTLLAALGGCGLVPKQPITQQPMTALPPMPPQAQSPGSI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCC
FNPGYAGRPLFEDQRPRNVGDILTIVIQENVNATKSSGANANRSGNTNFNVPTAGFLGGL
CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
FGKTNLSATGANVFSGTGGANASNTFNGTITVTVTGVLPNGNLMVSGEKQMLINQGDEFV
CCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEEEECCCCEEECCCCEEEECCCCCEE
RFSGVVNPNTISNLNAVYSTQVADAKIEYSAKGYLNEAENMGWLQRFFLNVSPW
EEECCCCCCCCCCCHHHHEEECCCCEEEECCCCCCCCHHCHHHHHHHHHCCCCC
>Mature Secondary Structure
MMMSHLTRNPVHSRTAQALVQLTLLAALGGCGLVPKQPITQQPMTALPPMPPQAQSPGSI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCC
FNPGYAGRPLFEDQRPRNVGDILTIVIQENVNATKSSGANANRSGNTNFNVPTAGFLGGL
CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
FGKTNLSATGANVFSGTGGANASNTFNGTITVTVTGVLPNGNLMVSGEKQMLINQGDEFV
CCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEEEECCCCEEECCCCEEEECCCCCEE
RFSGVVNPNTISNLNAVYSTQVADAKIEYSAKGYLNEAENMGWLQRFFLNVSPW
EEECCCCCCCCCCCHHHHEEECCCCEEEECCCCCCCCHHCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA