| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is fliE [H]
Identifier: 91785610
GI number: 91785610
Start: 4669720
End: 4670127
Strand: Reverse
Name: fliE [H]
Synonym: Bxe_A0167
Alternate gene names: 91785610
Gene position: 4670127-4669720 (Counterclockwise)
Preceding gene: 91785617
Following gene: 91785609
Centisome position: 95.39
GC content: 62.25
Gene sequence:
>408_bases ATGACCCGCTGCTATGCTTTCGTCCAGATCGGTACGGTTCCGGCATGCCGGTCGTCATTCCCTGGAGAAAACATGACTTT CCCCGTGAACGCGCTCTCGTCGGCGCTGCAACAGATGCAGTCGATGGCGGCGCAAGCGGCCGGCGGCAGCACGGCCGTCG CCGATACGTCCGGCGCGGCAACGCCCACCGGCTTTGCCTCCGCGCTCAAAGCATCGCTCGACAAGATCAGCGGCGATCAG ACCAAGGCGATCGGTGAATCGCAGGCGTTCGAACTCGGCGCGTCGAACGTGTCGCTGAACGACGTGATGGTCGACATGCA GAAGGCCAACGTGGGCTTCCAGTTCGGCCTGCAGGTGCGCAACAAGCTCGTGTCCGCCTATAACGACATCATGCAGATGT CGGTGTGA
Upstream 100 bases:
>100_bases CACGGACAGAGACTTTCACCCTTGAAATTATCCGCAGCGCGGCTCAACCCGATTGCTTGAATAGAGCCGGGTTTTCCCCC TAGTTTCGGGGCTTTCCCGT
Downstream 100 bases:
>100_bases ACGCGACCCGGGCGGCAAGGCTCACCCGCCCGCCCGAACGCGTGCATGCCGTGCGGCCTTCGTGGGCCGCGTCAATTGGC CCCTTAATCCTCCTTACACC
Product: flagellar hook-basal body complex protein FliE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MTRCYAFVQIGTVPACRSSFPGENMTFPVNALSSALQQMQSMAAQAAGGSTAVADTSGAATPTGFASALKASLDKISGDQ TKAIGESQAFELGASNVSLNDVMVDMQKANVGFQFGLQVRNKLVSAYNDIMQMSV
Sequences:
>Translated_135_residues MTRCYAFVQIGTVPACRSSFPGENMTFPVNALSSALQQMQSMAAQAAGGSTAVADTSGAATPTGFASALKASLDKISGDQ TKAIGESQAFELGASNVSLNDVMVDMQKANVGFQFGLQVRNKLVSAYNDIMQMSV >Mature_134_residues TRCYAFVQIGTVPACRSSFPGENMTFPVNALSSALQQMQSMAAQAAGGSTAVADTSGAATPTGFASALKASLDKISGDQT KAIGESQAFELGASNVSLNDVMVDMQKANVGFQFGLQVRNKLVSAYNDIMQMSV
Specific function: Unknown
COG id: COG1677
COG function: function code NU; Flagellar hook-basal body protein
Gene ontology:
Cell location: Bacterial flagellum basal body (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fliE family [H]
Homologues:
Organism=Escherichia coli, GI1788247, Length=75, Percent_Identity=56, Blast_Score=85, Evalue=2e-18,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001624 [H]
Pfam domain/function: PF02049 FliE [H]
EC number: NA
Molecular weight: Translated: 14027; Mature: 13896
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRCYAFVQIGTVPACRSSFPGENMTFPVNALSSALQQMQSMAAQAAGGSTAVADTSGAA CCCEEEEEEECCCCHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC TPTGFASALKASLDKISGDQTKAIGESQAFELGASNVSLNDVMVDMQKANVGFQFGLQVR CCHHHHHHHHHHHHHCCCCHHHHCCCCHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHH NKLVSAYNDIMQMSV HHHHHHHHHHHHHCC >Mature Secondary Structure TRCYAFVQIGTVPACRSSFPGENMTFPVNALSSALQQMQSMAAQAAGGSTAVADTSGAA CCEEEEEEECCCCHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC TPTGFASALKASLDKISGDQTKAIGESQAFELGASNVSLNDVMVDMQKANVGFQFGLQVR CCHHHHHHHHHHHHHCCCCHHHHCCCCHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHH NKLVSAYNDIMQMSV HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA