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The map label for this gene is dppC [H]

Identifier: 91785593

GI number: 91785593

Start: 4648552

End: 4649469

Strand: Reverse

Name: dppC [H]

Synonym: Bxe_A0184

Alternate gene names: 91785593

Gene position: 4649469-4648552 (Counterclockwise)

Preceding gene: 91785594

Following gene: 91785592

Centisome position: 94.97

GC content: 64.38

Gene sequence:

>918_bases
ATGGCAGACATACAAAACACAGTCCCCCAGTCGGTCACGCCCCCAAGCGGCCGCGCTATCGCCGCCCGTGAATTCTGGGC
GAATTTCTCGCGTAACCGTGGCGCGGTCGGCGCCGGCATCGTCGTACTGGTGTTGATCTTCGTCGCGATCTTCGCGCCGT
TGATCGCGCCGCACAGCCCGATCGAGCAATACCGCGACTTCGTGAAGATTCCGCCCGCATGGCTCGACGGCGGCAACTGG
AAGTTCATTCTCGGCACCGACGAAGCGGGCCGCGACATCCTCTCGCGTCTGATGTACGGTGCACGGCTGTCGTTCTGGAT
CGGTTTCGTCTCGGTGGTGCTCGCGCTGATTCCGGGCATCGTGCTCGGGCTGATCGCGGCATTCTTCGAGAAGTGGGCCG
ACACGCCGATCATGCGCATCATGGACGTGCTGCTCGCGCTGCCGTCGCTGCTGCTCGCCGTGGCGGTGGTGGCGATCATC
GGGCCGGGTCTCGTCAATACCATGCTCGCCATCGCGATCGTCGCGCTGCCGGGCTATGTGCGTTTGACGCGCGCGTCGGC
GCAAGGCGAGTTGCAGAAGGAGTACGTAACGGCTTCGCGTGTGGCGGGTGCGAGCACCTTGCGTCTGATGTTCTCGCAAG
TGCTGCCGAACTGCACCGCGCCGCTGATCGTGCAGGCTACGCTGGGCTTTTCGTCGGCGATTCTCGACGCCGCGGCGCTC
GGCTTTCTCGGCCTCGGCGTGCAACCGCCTTCGGCGGAGTGGGGCGCGATGCTGGCTTCGGCGCGCGACTACATCGACAG
CGCTTGGTGGATCGTTACCATGCCGGGTCTGTCCATCCTGATCTCGGTGCTCGCAATCAATCTGCTCGGCGACGGGCTGC
GCGACGCACTCGACCCGAAACTGAAAAGGATGGCGTAA

Upstream 100 bases:

>100_bases
TCCTGATGATCGCCACGCTGGTCATTGTCGTGAACCTCGTCGTCGATCTGCTGTACGGCGTGCTCAACCCGCGCATCCGC
CATACGAGGTAATCACGATC

Downstream 100 bases:

>100_bases
TGACCAGCTTATTAACCATCCGCAATCTCGCGGTGGACTTCAACGGACTGCCCGCCGTCGACCGGATCAGCCTCGATATC
GCGCCGGGCGAAGTGGTCGG

Product: dipeptide/oligopeptide/nickel ABC transporter inner membrane protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MADIQNTVPQSVTPPSGRAIAAREFWANFSRNRGAVGAGIVVLVLIFVAIFAPLIAPHSPIEQYRDFVKIPPAWLDGGNW
KFILGTDEAGRDILSRLMYGARLSFWIGFVSVVLALIPGIVLGLIAAFFEKWADTPIMRIMDVLLALPSLLLAVAVVAII
GPGLVNTMLAIAIVALPGYVRLTRASAQGELQKEYVTASRVAGASTLRLMFSQVLPNCTAPLIVQATLGFSSAILDAAAL
GFLGLGVQPPSAEWGAMLASARDYIDSAWWIVTMPGLSILISVLAINLLGDGLRDALDPKLKRMA

Sequences:

>Translated_305_residues
MADIQNTVPQSVTPPSGRAIAAREFWANFSRNRGAVGAGIVVLVLIFVAIFAPLIAPHSPIEQYRDFVKIPPAWLDGGNW
KFILGTDEAGRDILSRLMYGARLSFWIGFVSVVLALIPGIVLGLIAAFFEKWADTPIMRIMDVLLALPSLLLAVAVVAII
GPGLVNTMLAIAIVALPGYVRLTRASAQGELQKEYVTASRVAGASTLRLMFSQVLPNCTAPLIVQATLGFSSAILDAAAL
GFLGLGVQPPSAEWGAMLASARDYIDSAWWIVTMPGLSILISVLAINLLGDGLRDALDPKLKRMA
>Mature_304_residues
ADIQNTVPQSVTPPSGRAIAAREFWANFSRNRGAVGAGIVVLVLIFVAIFAPLIAPHSPIEQYRDFVKIPPAWLDGGNWK
FILGTDEAGRDILSRLMYGARLSFWIGFVSVVLALIPGIVLGLIAAFFEKWADTPIMRIMDVLLALPSLLLAVAVVAIIG
PGLVNTMLAIAIVALPGYVRLTRASAQGELQKEYVTASRVAGASTLRLMFSQVLPNCTAPLIVQATLGFSSAILDAAALG
FLGLGVQPPSAEWGAMLASARDYIDSAWWIVTMPGLSILISVLAINLLGDGLRDALDPKLKRMA

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789964, Length=281, Percent_Identity=60.4982206405694, Blast_Score=304, Evalue=4e-84,
Organism=Escherichia coli, GI1787054, Length=280, Percent_Identity=42.8571428571429, Blast_Score=222, Evalue=3e-59,
Organism=Escherichia coli, GI1787760, Length=265, Percent_Identity=44.9056603773585, Blast_Score=215, Evalue=3e-57,
Organism=Escherichia coli, GI1787549, Length=293, Percent_Identity=44.3686006825939, Blast_Score=209, Evalue=2e-55,
Organism=Escherichia coli, GI1789889, Length=226, Percent_Identity=39.3805309734513, Blast_Score=144, Evalue=8e-36,
Organism=Escherichia coli, GI1787498, Length=285, Percent_Identity=28.7719298245614, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1788505, Length=226, Percent_Identity=26.9911504424779, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32517; Mature: 32386

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADIQNTVPQSVTPPSGRAIAAREFWANFSRNRGAVGAGIVVLVLIFVAIFAPLIAPHSP
CCCCCHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH
IEQYRDFVKIPPAWLDGGNWKFILGTDEAGRDILSRLMYGARLSFWIGFVSVVLALIPGI
HHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGLIAAFFEKWADTPIMRIMDVLLALPSLLLAVAVVAIIGPGLVNTMLAIAIVALPGYV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHH
RLTRASAQGELQKEYVTASRVAGASTLRLMFSQVLPNCTAPLIVQATLGFSSAILDAAAL
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHH
GFLGLGVQPPSAEWGAMLASARDYIDSAWWIVTMPGLSILISVLAINLLGDGLRDALDPK
HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCHH
LKRMA
HHHCC
>Mature Secondary Structure 
ADIQNTVPQSVTPPSGRAIAAREFWANFSRNRGAVGAGIVVLVLIFVAIFAPLIAPHSP
CCCCHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH
IEQYRDFVKIPPAWLDGGNWKFILGTDEAGRDILSRLMYGARLSFWIGFVSVVLALIPGI
HHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGLIAAFFEKWADTPIMRIMDVLLALPSLLLAVAVVAIIGPGLVNTMLAIAIVALPGYV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHH
RLTRASAQGELQKEYVTASRVAGASTLRLMFSQVLPNCTAPLIVQATLGFSSAILDAAAL
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHH
GFLGLGVQPPSAEWGAMLASARDYIDSAWWIVTMPGLSILISVLAINLLGDGLRDALDPK
HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCHH
LKRMA
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 8550458 [H]