| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is fabG [H]
Identifier: 91785573
GI number: 91785573
Start: 4629363
End: 4630181
Strand: Reverse
Name: fabG [H]
Synonym: Bxe_A0204
Alternate gene names: 91785573
Gene position: 4630181-4629363 (Counterclockwise)
Preceding gene: 161621311
Following gene: 91785572
Centisome position: 94.57
GC content: 68.01
Gene sequence:
>819_bases ATGACCGCCTCTCTGGACACCGCCGCCGCCCGCGCGCCTGACACGCCGCGTGTCGTGCTGATTACCGGCGCCGCCCGCCG TATCGGGCGCTCGCTCGCGCTCGGTTTTGCCGCGCGTGGCTGGGACGTGGCCGTTCATTACGGCGCCTCGGGGGCGCAAG CCGACGAACTGGTCGCTGAAATCACCGCTCTGGGTCGCCGGGCGGTCGCGCTGCACGCCGAATTGGCCGACGAGGCGCAA GTCCAACGGCTTTTGCCGGCGTGTATCGAGGCCTTGGGCCTGCCGTCGTGTATCGTCAACAATGCGTCGCGCTTCGAGGA GGACACGGCGTGCACCGTCGGTTACGAGCTGCTGCTGAAGCTGACCGCGATGAATCTCGGCGCGCCGCTGGTGCTGGCGC GCGGCCTGTACGAGTTGACGCCGGAGGCCGCGCGCACCGACGAAAGCCTGCGCAGCGTGGTGATCAACGTGCTGGACCAG AAGCTGTACAACATGAACCCGGACTACCTGTCGTACACGCTCACCAAGGCGGCGTTGCAGACAGCCACGGTTGCGCTCGC CCAGGCGCTGGCGCCGAAAGTGCGCGTGGTCGGGCTCGCGCCCGGTTTGACGATGCAATCCGGCGATCAGACGCCGGAGG GTTTTGAAGCCGCTCACCGTACTACGCCTTTGGGCCGCGCGTCGCGGGCCGAGGATATTGTCGCCGCCGCGCTGTATCTC GCGGACGCAGCGGGCGTGACCGGAACGACGCTGGTGGTCGACGGCGGGCAGCACCTCGTGCCGCTGCCGCGCGACGTTAT GTTTTTGACGGGCGCTTAA
Upstream 100 bases:
>100_bases GATCTGCGCGACCAGCGCTTCGGACTGCGCCAGCGCGCTCGGGCCGGGAGCAGGTAAACTGTCGGGTTGGTGAGCTTTCG GATTCATCCCCGCATTGTAA
Downstream 100 bases:
>100_bases AGCGTGCGGCCAGCCGCCACGCTGGCGGCCGCCGTCGTTTGACGCGCCCCTTTGCGTGCTCCGCACGCTTTTTTCGACTG GAACGAACATGTTTGCCGCT
Product: short chain dehydrogenase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MTASLDTAAARAPDTPRVVLITGAARRIGRSLALGFAARGWDVAVHYGASGAQADELVAEITALGRRAVALHAELADEAQ VQRLLPACIEALGLPSCIVNNASRFEEDTACTVGYELLLKLTAMNLGAPLVLARGLYELTPEAARTDESLRSVVINVLDQ KLYNMNPDYLSYTLTKAALQTATVALAQALAPKVRVVGLAPGLTMQSGDQTPEGFEAAHRTTPLGRASRAEDIVAAALYL ADAAGVTGTTLVVDGGQHLVPLPRDVMFLTGA
Sequences:
>Translated_272_residues MTASLDTAAARAPDTPRVVLITGAARRIGRSLALGFAARGWDVAVHYGASGAQADELVAEITALGRRAVALHAELADEAQ VQRLLPACIEALGLPSCIVNNASRFEEDTACTVGYELLLKLTAMNLGAPLVLARGLYELTPEAARTDESLRSVVINVLDQ KLYNMNPDYLSYTLTKAALQTATVALAQALAPKVRVVGLAPGLTMQSGDQTPEGFEAAHRTTPLGRASRAEDIVAAALYL ADAAGVTGTTLVVDGGQHLVPLPRDVMFLTGA >Mature_271_residues TASLDTAAARAPDTPRVVLITGAARRIGRSLALGFAARGWDVAVHYGASGAQADELVAEITALGRRAVALHAELADEAQV QRLLPACIEALGLPSCIVNNASRFEEDTACTVGYELLLKLTAMNLGAPLVLARGLYELTPEAARTDESLRSVVINVLDQK LYNMNPDYLSYTLTKAALQTATVALAQALAPKVRVVGLAPGLTMQSGDQTPEGFEAAHRTTPLGRASRAEDIVAAALYLA DAAGVTGTTLVVDGGQHLVPLPRDVMFLTGA
Specific function: Unknown
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Escherichia coli, GI2367175, Length=248, Percent_Identity=27.8225806451613, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1789378, Length=252, Percent_Identity=29.3650793650794, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI1787891, Length=244, Percent_Identity=25, Blast_Score=67, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17562904, Length=266, Percent_Identity=27.0676691729323, Blast_Score=67, Evalue=7e-12, Organism=Drosophila melanogaster, GI24644339, Length=264, Percent_Identity=30.6818181818182, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI28571526, Length=258, Percent_Identity=30.6201550387597, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI21357041, Length=258, Percent_Identity=29.0697674418605, Blast_Score=73, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 28441; Mature: 28310
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASLDTAAARAPDTPRVVLITGAARRIGRSLALGFAARGWDVAVHYGASGAQADELVAE CCCCCCCHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH ITALGRRAVALHAELADEAQVQRLLPACIEALGLPSCIVNNASRFEEDTACTVGYELLLK HHHHCHHHEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHCCCCHHHHHHHHHHH LTAMNLGAPLVLARGLYELTPEAARTDESLRSVVINVLDQKLYNMNPDYLSYTLTKAALQ HHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH TATVALAQALAPKVRVVGLAPGLTMQSGDQTPEGFEAAHRTTPLGRASRAEDIVAAALYL HHHHHHHHHHCCCEEEEEECCCCEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH ADAAGVTGTTLVVDGGQHLVPLPRDVMFLTGA HHCCCCCCEEEEEECCCEECCCCCCEEEEECC >Mature Secondary Structure TASLDTAAARAPDTPRVVLITGAARRIGRSLALGFAARGWDVAVHYGASGAQADELVAE CCCCCCHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH ITALGRRAVALHAELADEAQVQRLLPACIEALGLPSCIVNNASRFEEDTACTVGYELLLK HHHHCHHHEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHCCCCHHHHHHHHHHH LTAMNLGAPLVLARGLYELTPEAARTDESLRSVVINVLDQKLYNMNPDYLSYTLTKAALQ HHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH TATVALAQALAPKVRVVGLAPGLTMQSGDQTPEGFEAAHRTTPLGRASRAEDIVAAALYL HHHHHHHHHHCCCEEEEEECCCCEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH ADAAGVTGTTLVVDGGQHLVPLPRDVMFLTGA HHCCCCCCEEEEEECCCEECCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8759840; 9384377; 9534248; 8654983 [H]