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The map label for this gene is rcsB [H]

Identifier: 91785499

GI number: 91785499

Start: 4562625

End: 4563314

Strand: Reverse

Name: rcsB [H]

Synonym: Bxe_A0280

Alternate gene names: 91785499

Gene position: 4563314-4562625 (Counterclockwise)

Preceding gene: 91785503

Following gene: 91785497

Centisome position: 93.21

GC content: 58.26

Gene sequence:

>690_bases
ATGCAAGATCCAGTCAGGGTCGTGGTCGCTGACGACCATCCGGTTATTCTGTTCGGCGCCGAGCAGGCTTTGCTCAAGTT
TCCTGGTCTGCAAGTGGTCGCCCGTGCACGACAGTCAACCGAATTGATCAAGGTGCTGCAAACCATTGCCTGCGACGTGC
TCGTCACGGATCTGGCAATGCCGGGCGGCCAATATGGCGACGGCTTGCCGCTGATCGGCTATCTACGCCGCAATTTCCCC
AACCTTCCCATCGTCGTATTGACGATGCTCGAGAACGCCGCGTTGCTCAAGCGGCTGAGCGAACTCGGCGTAACGTCGGT
CGTCAACAAGTCGGACGATCTGAGCCATATCGGGCTCGCGGTGCAGCACGTCAGCCGCAACCTCGAATACATGAGCCCGT
CGGTCAAGGCGTCGCTAGATGCATTGCGCATGAACGCCGGCGGCAAGAACGACGAAGTCATGTTGTCCAAACGTGAGCTG
GAAGTGGTGCGCCTGTTCGTGTCCGGCATGACGATCAAGGAAATCTCGGAGCAACTCAACCGCAGCATCAAAACGATCAG
CACGCAGAAGAACACGGCCATGCGCAAACTCGGCATCGAGCGGGATTCCGAGTTGTTCCAGTACGCGCAGAGCAACGGCT
TGCTGAACCTGTCGTCGCATTCAACGGACGCAACCGGCGGCGTGTCTTAA

Upstream 100 bases:

>100_bases
TCCGCGCGAGACTCAAGCCGCGTCCTCATTCGTTTGAGTACTAGAGCACAAAGGCATGTCAGAAGTTTTGGAGAGTGGTT
TATCTGCCGAAGGGAGGGCA

Downstream 100 bases:

>100_bases
CGTCGCGCACGTTTTGTAGGGCGAAGATAGAAAAAGGGCGCCTGTCGATAAGACAGGCGCCCTTTTTTATCCGATCCGCG
TCAGGCGGCGACGCTTATTG

Product: two component LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MQDPVRVVVADDHPVILFGAEQALLKFPGLQVVARARQSTELIKVLQTIACDVLVTDLAMPGGQYGDGLPLIGYLRRNFP
NLPIVVLTMLENAALLKRLSELGVTSVVNKSDDLSHIGLAVQHVSRNLEYMSPSVKASLDALRMNAGGKNDEVMLSKREL
EVVRLFVSGMTIKEISEQLNRSIKTISTQKNTAMRKLGIERDSELFQYAQSNGLLNLSSHSTDATGGVS

Sequences:

>Translated_229_residues
MQDPVRVVVADDHPVILFGAEQALLKFPGLQVVARARQSTELIKVLQTIACDVLVTDLAMPGGQYGDGLPLIGYLRRNFP
NLPIVVLTMLENAALLKRLSELGVTSVVNKSDDLSHIGLAVQHVSRNLEYMSPSVKASLDALRMNAGGKNDEVMLSKREL
EVVRLFVSGMTIKEISEQLNRSIKTISTQKNTAMRKLGIERDSELFQYAQSNGLLNLSSHSTDATGGVS
>Mature_229_residues
MQDPVRVVVADDHPVILFGAEQALLKFPGLQVVARARQSTELIKVLQTIACDVLVTDLAMPGGQYGDGLPLIGYLRRNFP
NLPIVVLTMLENAALLKRLSELGVTSVVNKSDDLSHIGLAVQHVSRNLEYMSPSVKASLDALRMNAGGKNDEVMLSKREL
EVVRLFVSGMTIKEISEQLNRSIKTISTQKNTAMRKLGIERDSELFQYAQSNGLLNLSSHSTDATGGVS

Specific function: Also stimulates ftsZ expression. This suggests that rcsB is a regulator implicated in the regulation of more than one cellular function [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788546, Length=207, Percent_Identity=42.0289855072464, Blast_Score=162, Evalue=2e-41,
Organism=Escherichia coli, GI1786747, Length=209, Percent_Identity=28.7081339712919, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1788222, Length=220, Percent_Identity=27.7272727272727, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1790102, Length=201, Percent_Identity=28.8557213930348, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1788521, Length=196, Percent_Identity=27.5510204081633, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788712, Length=207, Percent_Identity=22.7053140096618, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 24970; Mature: 24970

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDPVRVVVADDHPVILFGAEQALLKFPGLQVVARARQSTELIKVLQTIACDVLVTDLAM
CCCCEEEEEECCCCEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PGGQYGDGLPLIGYLRRNFPNLPIVVLTMLENAALLKRLSELGVTSVVNKSDDLSHIGLA
CCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHH
VQHVSRNLEYMSPSVKASLDALRMNAGGKNDEVMLSKRELEVVRLFVSGMTIKEISEQLN
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHH
RSIKTISTQKNTAMRKLGIERDSELFQYAQSNGLLNLSSHSTDATGGVS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCC
>Mature Secondary Structure
MQDPVRVVVADDHPVILFGAEQALLKFPGLQVVARARQSTELIKVLQTIACDVLVTDLAM
CCCCEEEEEECCCCEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PGGQYGDGLPLIGYLRRNFPNLPIVVLTMLENAALLKRLSELGVTSVVNKSDDLSHIGLA
CCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHH
VQHVSRNLEYMSPSVKASLDALRMNAGGKNDEVMLSKRELEVVRLFVSGMTIKEISEQLN
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHH
RSIKTISTQKNTAMRKLGIERDSELFQYAQSNGLLNLSSHSTDATGGVS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]