Click here to switch to the map view.

The map label for this gene is secY [H]

Identifier: 91785445

GI number: 91785445

Start: 4503693

End: 4505039

Strand: Reverse

Name: secY [H]

Synonym: Bxe_A0334

Alternate gene names: 91785445

Gene position: 4505039-4503693 (Counterclockwise)

Preceding gene: 91785446

Following gene: 91785444

Centisome position: 92.02

GC content: 56.12

Gene sequence:

>1347_bases
TTGGCTAACAGCCCGAGTCTCGCAAAACCCGGTCGCAGCGCGGCGAAGTTCGGCGATCTGCGTCGGCGTGCAGTGTTCCT
GCTGCTGGCGTTGATCGTCTATCGCATCGGCGCGCATATTCCGGTGCCGGGTATCGACCCGGACCAGCTGGCAAAGTTGT
TCCAAAGCCAGTCGGGCGGCATCCTTGGCATGTTCAACATGTTTTCGGGTGGCGCACTTTCGCGGTTCACGATTTTCGCG
CTGGGGATCATGCCGTATATTTCGGCGTCGATCATCATGCAGTTGCTGGCAATTGTCTCGCCGCAGCTCGAAGCGCTTAA
AAAAGAAGGGCAGGCGGGGCAGCGCAAGATCACGCAGTACACGCGTATCTTTACGGTCCTGTTGGCGACGTTCCAGGCGT
TCGGCATTGCCGTCGCGTTGGAAAATCAGCCGGGCCTGGTGATTGATCCGGGGATGGTTTTTCGGTTGACGACGGTCGTG
ACGCTGGTGACCGGCACGATGTTCCTGATGTGGCTGGGTGAGCAGATCACGGAGCGTGGGCTTGGTAACGGTATTTCGAT
CATTATTTTCGGCGGGATTGCAGCGGGTTTCCCGAATGCGATTGGCGGACTTGTTTCGCTGGTGCAAACCGGCTCGATGA
GCCCGATATCCGCGATTATCGTCGTCGCACTGATTGCTGCTGTGACGTATCTGGTGGTGTTCATCGAACGCGGCCAGCGC
AAGATTCTTGTGAACTACGCGAAGCGGCAAGTCGGTAACAAGATTTACGGTGGACAGTCTTCGCATCTGCCGTTGAAGTT
GAACATGTCGGGCGTGATTCCGCCGATCTTTGCGTCGTCGATCATTCTCTTCCCGGCAACCATCCTGAACTGGTTTAGTT
CGGGATCGCGTACCGGTTGGTTCGCAGACACGTTGCACAACGTAGCCGAAGCCCTTAAGCCCGGTCAACCCGTGTACGTG
TTGCTGTACGCGTTGGCGATCGTTTTCTTCTGCTTCTTCTACACCGCGCTGGTGTTCAACAGCAGAGAGACGGCCGACAA
CCTGAAAAAGAGTGGCGCTTTCGTCCCAGGTATTCGCCCGGGCGATCAAACGGCGCGATACATCGACCGCATCCTGACGC
GTTTGACGCTGGCCGGTGCGATCTACATCGTGTTTGTTTGTCTGCTGCCCGAGTTTCTGGTGCTGCGCTGGAACGTACCG
TTTTATTTTGGTGGAACGTCGCTGCTGATCATTGTCGTCGTCACAATGGATTTCATGGCACAGGTGCAGTCGTACGTTAT
GTCGCAACAGTATGAATCGCTGCTGAAGAAAGCTAATTTCAAAGGCGGCGGCGTCCCGATGCGTTGA

Upstream 100 bases:

>100_bases
ACGAAGGGTGCGCGCGCTGCTATTGAAGCAGCTGGCGGCTCTTTTGCCGAGTAACGCGCAAGTTATTTGCCGTCACTAGC
ATTTGCATCGGAGAAGGTAC

Downstream 100 bases:

>100_bases
AAGGACTTATGGCCAAAGACGATGTTATCCAGATGCAGGGTGAAGTCATCGAAAACCTGCCTAATGCTACCTTCAGGGTG
AAGCTGGAAAACGGCCATGT

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MANSPSLAKPGRSAAKFGDLRRRAVFLLLALIVYRIGAHIPVPGIDPDQLAKLFQSQSGGILGMFNMFSGGALSRFTIFA
LGIMPYISASIIMQLLAIVSPQLEALKKEGQAGQRKITQYTRIFTVLLATFQAFGIAVALENQPGLVIDPGMVFRLTTVV
TLVTGTMFLMWLGEQITERGLGNGISIIIFGGIAAGFPNAIGGLVSLVQTGSMSPISAIIVVALIAAVTYLVVFIERGQR
KILVNYAKRQVGNKIYGGQSSHLPLKLNMSGVIPPIFASSIILFPATILNWFSSGSRTGWFADTLHNVAEALKPGQPVYV
LLYALAIVFFCFFYTALVFNSRETADNLKKSGAFVPGIRPGDQTARYIDRILTRLTLAGAIYIVFVCLLPEFLVLRWNVP
FYFGGTSLLIIVVVTMDFMAQVQSYVMSQQYESLLKKANFKGGGVPMR

Sequences:

>Translated_448_residues
MANSPSLAKPGRSAAKFGDLRRRAVFLLLALIVYRIGAHIPVPGIDPDQLAKLFQSQSGGILGMFNMFSGGALSRFTIFA
LGIMPYISASIIMQLLAIVSPQLEALKKEGQAGQRKITQYTRIFTVLLATFQAFGIAVALENQPGLVIDPGMVFRLTTVV
TLVTGTMFLMWLGEQITERGLGNGISIIIFGGIAAGFPNAIGGLVSLVQTGSMSPISAIIVVALIAAVTYLVVFIERGQR
KILVNYAKRQVGNKIYGGQSSHLPLKLNMSGVIPPIFASSIILFPATILNWFSSGSRTGWFADTLHNVAEALKPGQPVYV
LLYALAIVFFCFFYTALVFNSRETADNLKKSGAFVPGIRPGDQTARYIDRILTRLTLAGAIYIVFVCLLPEFLVLRWNVP
FYFGGTSLLIIVVVTMDFMAQVQSYVMSQQYESLLKKANFKGGGVPMR
>Mature_447_residues
ANSPSLAKPGRSAAKFGDLRRRAVFLLLALIVYRIGAHIPVPGIDPDQLAKLFQSQSGGILGMFNMFSGGALSRFTIFAL
GIMPYISASIIMQLLAIVSPQLEALKKEGQAGQRKITQYTRIFTVLLATFQAFGIAVALENQPGLVIDPGMVFRLTTVVT
LVTGTMFLMWLGEQITERGLGNGISIIIFGGIAAGFPNAIGGLVSLVQTGSMSPISAIIVVALIAAVTYLVVFIERGQRK
ILVNYAKRQVGNKIYGGQSSHLPLKLNMSGVIPPIFASSIILFPATILNWFSSGSRTGWFADTLHNVAEALKPGQPVYVL
LYALAIVFFCFFYTALVFNSRETADNLKKSGAFVPGIRPGDQTARYIDRILTRLTLAGAIYIVFVCLLPEFLVLRWNVPF
YFGGTSLLIIVVVTMDFMAQVQSYVMSQQYESLLKKANFKGGGVPMR

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=451, Percent_Identity=64.9667405764967, Blast_Score=531, Evalue=1e-152,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 48670; Mature: 48539

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANSPSLAKPGRSAAKFGDLRRRAVFLLLALIVYRIGAHIPVPGIDPDQLAKLFQSQSGG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC
ILGMFNMFSGGALSRFTIFALGIMPYISASIIMQLLAIVSPQLEALKKEGQAGQRKITQY
EEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHH
TRIFTVLLATFQAFGIAVALENQPGLVIDPGMVFRLTTVVTLVTGTMFLMWLGEQITERG
HHHHHHHHHHHHHHHEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LGNGISIIIFGGIAAGFPNAIGGLVSLVQTGSMSPISAIIVVALIAAVTYLVVFIERGQR
CCCCCEEEEECCHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCH
KILVNYAKRQVGNKIYGGQSSHLPLKLNMSGVIPPIFASSIILFPATILNWFSSGSRTGW
HHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCH
FADTLHNVAEALKPGQPVYVLLYALAIVFFCFFYTALVFNSRETADNLKKSGAFVPGIRP
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCC
GDQTARYIDRILTRLTLAGAIYIVFVCLLPEFLVLRWNVPFYFGGTSLLIIVVVTMDFMA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHH
QVQSYVMSQQYESLLKKANFKGGGVPMR
HHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
ANSPSLAKPGRSAAKFGDLRRRAVFLLLALIVYRIGAHIPVPGIDPDQLAKLFQSQSGG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC
ILGMFNMFSGGALSRFTIFALGIMPYISASIIMQLLAIVSPQLEALKKEGQAGQRKITQY
EEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHH
TRIFTVLLATFQAFGIAVALENQPGLVIDPGMVFRLTTVVTLVTGTMFLMWLGEQITERG
HHHHHHHHHHHHHHHEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LGNGISIIIFGGIAAGFPNAIGGLVSLVQTGSMSPISAIIVVALIAAVTYLVVFIERGQR
CCCCCEEEEECCHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCH
KILVNYAKRQVGNKIYGGQSSHLPLKLNMSGVIPPIFASSIILFPATILNWFSSGSRTGW
HHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCH
FADTLHNVAEALKPGQPVYVLLYALAIVFFCFFYTALVFNSRETADNLKKSGAFVPGIRP
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCC
GDQTARYIDRILTRLTLAGAIYIVFVCLLPEFLVLRWNVPFYFGGTSLLIIVVVTMDFMA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHH
QVQSYVMSQQYESLLKKANFKGGGVPMR
HHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9322765; 10952301 [H]