| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is cyaY [H]
Identifier: 91785426
GI number: 91785426
Start: 4487035
End: 4487352
Strand: Reverse
Name: cyaY [H]
Synonym: Bxe_A0353
Alternate gene names: 91785426
Gene position: 4487352-4487035 (Counterclockwise)
Preceding gene: 91785429
Following gene: 91785424
Centisome position: 91.66
GC content: 62.26
Gene sequence:
>318_bases ATGTCCGATAGTGAATACCTGACCCGCGCGGAAGCCGCGCTAGCCGCCATCGAACGCGCGCTGGACGACACGGATGCCGA CATCGAACTCGAGCGCAGCGGCAACGTCCTGACCCTCGAATTCGAGAATCGCTCGAAGATTATCGTCAACCTCCAGCCGC CCATGAGCGAGATCTGGATTGCCGCGAAAGCGGGCGGTTTCCACTTCCGTTTCGTCGATGGCGAGTGGCGTGACACGCGC AGCGGCACGGAGTTTTTCGCCGCGCTGTCGGAGTACGCGACGCAGCAAGCCGGCGAGCCGGTTCACTTCGAAGCGTAA
Upstream 100 bases:
>100_bases ATGGCCAAAACCGCTACAATCGCGCGGCCGGGCGCCGCCGCGCGCATCCGAGATACGACTCGCATGACTGTCCCTGAATA AATAATCGATGGAGTTTAGC
Downstream 100 bases:
>100_bases AACGCGCAGTCTGGAGGAGCGCCGCAAACGCGGCTCCCGCGATCCCGATCATCCCGACTGCACAGGCAGAATGGCCGCGC ATTCAGCGCGGCCATTCTGC
Product: frataxin-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MSDSEYLTRAEAALAAIERALDDTDADIELERSGNVLTLEFENRSKIIVNLQPPMSEIWIAAKAGGFHFRFVDGEWRDTR SGTEFFAALSEYATQQAGEPVHFEA
Sequences:
>Translated_105_residues MSDSEYLTRAEAALAAIERALDDTDADIELERSGNVLTLEFENRSKIIVNLQPPMSEIWIAAKAGGFHFRFVDGEWRDTR SGTEFFAALSEYATQQAGEPVHFEA >Mature_104_residues SDSEYLTRAEAALAAIERALDDTDADIELERSGNVLTLEFENRSKIIVNLQPPMSEIWIAAKAGGFHFRFVDGEWRDTRS GTEFFAALSEYATQQAGEPVHFEA
Specific function: Not Known; Its Knock Out Does Not Affect Cellular Iron Content. [C]
COG id: COG1965
COG function: function code P; Protein implicated in iron transport, frataxin homolog
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the frataxin family [H]
Homologues:
Organism=Escherichia coli, GI1790239, Length=105, Percent_Identity=47.6190476190476, Blast_Score=84, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002908 - InterPro: IPR020895 [H]
Pfam domain/function: PF01491 Frataxin_Cyay [H]
EC number: NA
Molecular weight: Translated: 11741; Mature: 11610
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: PS50810 FRATAXIN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSEYLTRAEAALAAIERALDDTDADIELERSGNVLTLEFENRSKIIVNLQPPMSEIWI CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCCEEEEEECCCHHHEEE AAKAGGFHFRFVDGEWRDTRSGTEFFAALSEYATQQAGEPVHFEA EEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECC >Mature Secondary Structure SDSEYLTRAEAALAAIERALDDTDADIELERSGNVLTLEFENRSKIIVNLQPPMSEIWI CCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCCEEEEEECCCHHHEEE AAKAGGFHFRFVDGEWRDTRSGTEFFAALSEYATQQAGEPVHFEA EEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA