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The map label for this gene is yadH [H]

Identifier: 91785385

GI number: 91785385

Start: 4442268

End: 4443032

Strand: Reverse

Name: yadH [H]

Synonym: Bxe_A0394

Alternate gene names: 91785385

Gene position: 4443032-4442268 (Counterclockwise)

Preceding gene: 91785386

Following gene: 91785384

Centisome position: 90.75

GC content: 58.04

Gene sequence:

>765_bases
ATGAGCGGTTACAGTGGATTCACCACGCTGTTTTATAAAGAACTCCTGCGGTTCTGGAAGGTGGCGTTCCAGACCGTGCT
GGCGCCGATCATTACCGCGCTCCTGTATCTGACGATTTTCGGCCACGCTTTGCGCGGTCATGTGCAGGTCTATCCGGGCG
TCGAATACACGAGTTTCCTGATTCCGGGTCTCGTGATGATGAGCGTGCTGCAAAATGCATTCGCCAACAGTTCGTCCTCG
CTGATCCAGTCCAAGATTACCGGCAACCTGGTGTTCGTCCTGTTGCCGCCGCTGTCGCACTACGAGATGTTCGGCGCCTA
TGTGCTCGCGGCCGTGGCGCGAGGGCTGGCGGTCGGCTTCGGCGTGTTCATCGTGACGATCTGGTTCGTGCCGGTCAGTT
TCAGCGCGCCGCTCTACATCGTTCTCTTCGCGATTTTCGGCGCGGCGATTCTCGGCACGCTCGGTTTGATCGCCGGTATC
TGGGCCGAAAAATTCGATCAGCTGGCGGCGTTTCAAAATTTTCTGATCATGCCGCTCACGTTCCTCTCGGGCGTGTTCTA
CTCCACGCATACGCTGCCACCGGTGTGGCGCGAAGTATCGCGGCTCAATCCCTTTTTCTACATGATCGACGGCTTTCGCT
ACGGTTTCTTCGGGATGTCGGATATCAATCCGCTCGCGAGCCTCGCGATCGTCGCCGGTTTCTTTGTGGTGCTGGCCGTG
GTGGCGATGCGCATGCTCGCTTCCGGCTACAAACTGCGCCACTGA

Upstream 100 bases:

>100_bases
CAGCGGGCTGCACATTCGAAGAAATCGAGGTCCGCAAGGCCGACCTCGAAGATGTGTTCGTTCAGGTGATGAACGGTCCG
GAAGTGATCGAGGGGCTTGC

Downstream 100 bases:

>100_bases
TCAGGAGCTTCTCTCATGTTGCCGACTCCCGAACAGGTCAAGCAATACATCGCGGCTGGGCTTGCCTGCCAGCATCTCGA
AGTCGAAGGCGACGGCCAGC

Product: ABC multidrug efflux pump, inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MSGYSGFTTLFYKELLRFWKVAFQTVLAPIITALLYLTIFGHALRGHVQVYPGVEYTSFLIPGLVMMSVLQNAFANSSSS
LIQSKITGNLVFVLLPPLSHYEMFGAYVLAAVARGLAVGFGVFIVTIWFVPVSFSAPLYIVLFAIFGAAILGTLGLIAGI
WAEKFDQLAAFQNFLIMPLTFLSGVFYSTHTLPPVWREVSRLNPFFYMIDGFRYGFFGMSDINPLASLAIVAGFFVVLAV
VAMRMLASGYKLRH

Sequences:

>Translated_254_residues
MSGYSGFTTLFYKELLRFWKVAFQTVLAPIITALLYLTIFGHALRGHVQVYPGVEYTSFLIPGLVMMSVLQNAFANSSSS
LIQSKITGNLVFVLLPPLSHYEMFGAYVLAAVARGLAVGFGVFIVTIWFVPVSFSAPLYIVLFAIFGAAILGTLGLIAGI
WAEKFDQLAAFQNFLIMPLTFLSGVFYSTHTLPPVWREVSRLNPFFYMIDGFRYGFFGMSDINPLASLAIVAGFFVVLAV
VAMRMLASGYKLRH
>Mature_253_residues
SGYSGFTTLFYKELLRFWKVAFQTVLAPIITALLYLTIFGHALRGHVQVYPGVEYTSFLIPGLVMMSVLQNAFANSSSSL
IQSKITGNLVFVLLPPLSHYEMFGAYVLAAVARGLAVGFGVFIVTIWFVPVSFSAPLYIVLFAIFGAAILGTLGLIAGIW
AEKFDQLAAFQNFLIMPLTFLSGVFYSTHTLPPVWREVSRLNPFFYMIDGFRYGFFGMSDINPLASLAIVAGFFVVLAVV
AMRMLASGYKLRH

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=245, Percent_Identity=36.3265306122449, Blast_Score=171, Evalue=4e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 28067; Mature: 27936

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGYSGFTTLFYKELLRFWKVAFQTVLAPIITALLYLTIFGHALRGHVQVYPGVEYTSFL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHH
IPGLVMMSVLQNAFANSSSSLIQSKITGNLVFVLLPPLSHYEMFGAYVLAAVARGLAVGF
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
GVFIVTIWFVPVSFSAPLYIVLFAIFGAAILGTLGLIAGIWAEKFDQLAAFQNFLIMPLT
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLSGVFYSTHTLPPVWREVSRLNPFFYMIDGFRYGFFGMSDINPLASLAIVAGFFVVLAV
HHHHHHHHHCCCCHHHHHHHHCCCHHEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
VAMRMLASGYKLRH
HHHHHHHCCCCCCC
>Mature Secondary Structure 
SGYSGFTTLFYKELLRFWKVAFQTVLAPIITALLYLTIFGHALRGHVQVYPGVEYTSFL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHH
IPGLVMMSVLQNAFANSSSSLIQSKITGNLVFVLLPPLSHYEMFGAYVLAAVARGLAVGF
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
GVFIVTIWFVPVSFSAPLYIVLFAIFGAAILGTLGLIAGIWAEKFDQLAAFQNFLIMPLT
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLSGVFYSTHTLPPVWREVSRLNPFFYMIDGFRYGFFGMSDINPLASLAIVAGFFVVLAV
HHHHHHHHHCCCCHHHHHHHHCCCHHEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
VAMRMLASGYKLRH
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]