Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is dtd [H]

Identifier: 91785168

GI number: 91785168

Start: 4203976

End: 4204434

Strand: Reverse

Name: dtd [H]

Synonym: Bxe_A0612

Alternate gene names: 91785168

Gene position: 4204434-4203976 (Counterclockwise)

Preceding gene: 91785169

Following gene: 91785167

Centisome position: 85.88

GC content: 67.1

Gene sequence:

>459_bases
ATGATCGCGCTGATTCAACGTGTGCGGCGCGCGGAGGTGCGCGTGGCCGACCGCGTAACGGGCGCGATCGAGGCGGGTCT
GCTCGCGCTCGTCTGCGCCGAACGCGGCGATACGGAGGCGGCGGCCGACCGGCTGCTCGCCAAAGTGCTCGGCTACCGCG
TATTCAGCGATGCGGCCGGCAAAATGAATCTCTCCGTACAAAATCTCGACGGCGCCGGGCGCGCGGGCGGCCTGCTGCTC
GTTTCGCAGTTCACGCTGGCCGCGGACACCAACAGCGGTCTGCGTCCGAGCTTTACGCCAGCCGCGCCGCCCGATGAAGG
CAAGCGCCTCTTCGATTATTTTGTCGCAGCGGCGCGGGCGAAACATCCGGTCGTCGAGACCGGCGAATTCGGCGCCGATA
TGCAGGTGTCGCTCGTCAATGACGGGCCGGTCACGTTCTGGCTGCAGACGCACGCCTGA

Upstream 100 bases:

>100_bases
GTCGAAGCCGGCGAGTACGTCGTGCAGGTCGGCAAGCGCCGTTTTGCACGCGTCACGCTGACGGCCTGATGGGCCCGACG
TCGCATCTGGAGTCGAACCG

Downstream 100 bases:

>100_bases
TCCCGGCGGTCGTTCCGGCATGCGCGCCGCGGCGCGCATCTACCCTCCAGCCGCTTTTTGCGACAATAGCGGCTCGGCAT
AACCGGCTGATGGCGCCCAC

Product: D-tyrosyl-tRNA(Tyr) deacylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MIALIQRVRRAEVRVADRVTGAIEAGLLALVCAERGDTEAAADRLLAKVLGYRVFSDAAGKMNLSVQNLDGAGRAGGLLL
VSQFTLAADTNSGLRPSFTPAAPPDEGKRLFDYFVAAARAKHPVVETGEFGADMQVSLVNDGPVTFWLQTHA

Sequences:

>Translated_152_residues
MIALIQRVRRAEVRVADRVTGAIEAGLLALVCAERGDTEAAADRLLAKVLGYRVFSDAAGKMNLSVQNLDGAGRAGGLLL
VSQFTLAADTNSGLRPSFTPAAPPDEGKRLFDYFVAAARAKHPVVETGEFGADMQVSLVNDGPVTFWLQTHA
>Mature_152_residues
MIALIQRVRRAEVRVADRVTGAIEAGLLALVCAERGDTEAAADRLLAKVLGYRVFSDAAGKMNLSVQNLDGAGRAGGLLL
VSQFTLAADTNSGLRPSFTPAAPPDEGKRLFDYFVAAARAKHPVVETGEFGADMQVSLVNDGPVTFWLQTHA

Specific function: Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine [H]

COG id: COG1490

COG function: function code J; D-Tyr-tRNAtyr deacylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DTD family [H]

Homologues:

Organism=Homo sapiens, GI30795227, Length=154, Percent_Identity=35.0649350649351, Blast_Score=84, Evalue=7e-17,
Organism=Escherichia coli, GI1790320, Length=149, Percent_Identity=61.744966442953, Blast_Score=176, Evalue=5e-46,
Organism=Caenorhabditis elegans, GI115533292, Length=148, Percent_Identity=37.8378378378378, Blast_Score=81, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6319982, Length=152, Percent_Identity=38.1578947368421, Blast_Score=92, Evalue=4e-20,
Organism=Drosophila melanogaster, GI281361569, Length=152, Percent_Identity=35.5263157894737, Blast_Score=82, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003732 [H]

Pfam domain/function: PF02580 Tyr_Deacylase [H]

EC number: NA

Molecular weight: Translated: 16111; Mature: 16111

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIALIQRVRRAEVRVADRVTGAIEAGLLALVCAERGDTEAAADRLLAKVLGYRVFSDAAG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC
KMNLSVQNLDGAGRAGGLLLVSQFTLAADTNSGLRPSFTPAAPPDEGKRLFDYFVAAARA
EEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
KHPVVETGEFGADMQVSLVNDGPVTFWLQTHA
CCCCEECCCCCCCEEEEEECCCCEEEEEEECC
>Mature Secondary Structure
MIALIQRVRRAEVRVADRVTGAIEAGLLALVCAERGDTEAAADRLLAKVLGYRVFSDAAG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC
KMNLSVQNLDGAGRAGGLLLVSQFTLAADTNSGLRPSFTPAAPPDEGKRLFDYFVAAARA
EEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
KHPVVETGEFGADMQVSLVNDGPVTFWLQTHA
CCCCEECCCCCCCEEEEEECCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA