| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is gpmB [H]
Identifier: 91785167
GI number: 91785167
Start: 4203195
End: 4203866
Strand: Reverse
Name: gpmB [H]
Synonym: Bxe_A0613
Alternate gene names: 91785167
Gene position: 4203866-4203195 (Counterclockwise)
Preceding gene: 91785168
Following gene: 91785162
Centisome position: 85.87
GC content: 65.03
Gene sequence:
>672_bases ATGACTACGCAGATTCTGTTCATCCGGCACGGCGAGACCGACTGGAATCGCATCAAGCGCATTCAAGGTCACGTCGACAT TCCGCTTGCCACGACGGGGCTGGCCCAGGCGCAGCGGCTTGCGCGCCGCATGGCCGAAGAGGCGAAGCAGGGCGCACGGC TCGACGCGATCTATTCGAGCGACCTGCAACGCGCGCAACAAACCGCCCAGCCGGTCGCCGACGCGCTCGGCTTGCCGCTG CAGTTGCGCGAAAATCTGCGCGAGCGTTCATATGGCGCCTTCCAGGGCCATGACAACGACGAGATCGCCCAGCGCTTCCC CGACGAATACGCGCACTGGCAAACTCGCGATCCTGGCTTCTCGCCGCCGGACGGTGAGTCGCAACGCGCGCTCTACCACC GTGTGCTGCACGCGATCGAACCGCTGGTCGCCGCGCATCCCGGCGGGCGGATTGCCTGCGTCGCGCATGGCGGCGTGCTC GATTGCGTGCGGCGCTTCGCCTGCGGTTTGCCGCTCGATGCGCCGCGTGACTATCCGCTGCTGAACACGAGTGTGAACAC GGTGGATTTCGATAATGGCAAGGCGACGATTGTGACGTGGGCGGACGTCTCGCATCTCGATGCGCCGAGCGAAGACGATA GTTTCAAGAAGGCGGCAGAGCCGGGCCGTTGA
Upstream 100 bases:
>100_bases TCGTTCCGGCATGCGCGCCGCGGCGCGCATCTACCCTCCAGCCGCTTTTTGCGACAATAGCGGCTCGGCATAACCGGCTG ATGGCGCCCACTTTCATCCC
Downstream 100 bases:
>100_bases TCGGCACGTGCCCGGTTGGGCGGCGTGAGCGTGAGTTCGTGCTCGGCGGCCGACCTGGACCGTTCGCGAACCTTCCGCGC ATTGGCGCAGCCAAACGTTC
Product: phosphoglycerate mutase
Products: NA
Alternate protein names: PGAM; Phosphoglyceromutase [H]
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MTTQILFIRHGETDWNRIKRIQGHVDIPLATTGLAQAQRLARRMAEEAKQGARLDAIYSSDLQRAQQTAQPVADALGLPL QLRENLRERSYGAFQGHDNDEIAQRFPDEYAHWQTRDPGFSPPDGESQRALYHRVLHAIEPLVAAHPGGRIACVAHGGVL DCVRRFACGLPLDAPRDYPLLNTSVNTVDFDNGKATIVTWADVSHLDAPSEDDSFKKAAEPGR
Sequences:
>Translated_223_residues MTTQILFIRHGETDWNRIKRIQGHVDIPLATTGLAQAQRLARRMAEEAKQGARLDAIYSSDLQRAQQTAQPVADALGLPL QLRENLRERSYGAFQGHDNDEIAQRFPDEYAHWQTRDPGFSPPDGESQRALYHRVLHAIEPLVAAHPGGRIACVAHGGVL DCVRRFACGLPLDAPRDYPLLNTSVNTVDFDNGKATIVTWADVSHLDAPSEDDSFKKAAEPGR >Mature_222_residues TTQILFIRHGETDWNRIKRIQGHVDIPLATTGLAQAQRLARRMAEEAKQGARLDAIYSSDLQRAQQTAQPVADALGLPLQ LRENLRERSYGAFQGHDNDEIAQRFPDEYAHWQTRDPGFSPPDGESQRALYHRVLHAIEPLVAAHPGGRIACVAHGGVLD CVRRFACGLPLDAPRDYPLLNTSVNTVDFDNGKATIVTWADVSHLDAPSEDDSFKKAAEPGR
Specific function: Unknown
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. GpmB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790856, Length=219, Percent_Identity=33.7899543378995, Blast_Score=105, Evalue=2e-24, Organism=Escherichia coli, GI1786970, Length=126, Percent_Identity=34.1269841269841, Blast_Score=78, Evalue=4e-16, Organism=Escherichia coli, GI1786857, Length=195, Percent_Identity=28.2051282051282, Blast_Score=76, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6324857, Length=195, Percent_Identity=28.7179487179487, Blast_Score=70, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6322697, Length=123, Percent_Identity=32.520325203252, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR023086 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 24723; Mature: 24592
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQILFIRHGETDWNRIKRIQGHVDIPLATTGLAQAQRLARRMAEEAKQGARLDAIYSS CCCEEEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHH DLQRAQQTAQPVADALGLPLQLRENLRERSYGAFQGHDNDEIAQRFPDEYAHWQTRDPGF HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHCCCCCCCCC SPPDGESQRALYHRVLHAIEPLVAAHPGGRIACVAHGGVLDCVRRFACGLPLDAPRDYPL CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCE LNTSVNTVDFDNGKATIVTWADVSHLDAPSEDDSFKKAAEPGR ECCCCCEEEECCCCEEEEEECCHHHCCCCCCCCHHHHHCCCCC >Mature Secondary Structure TTQILFIRHGETDWNRIKRIQGHVDIPLATTGLAQAQRLARRMAEEAKQGARLDAIYSS CCEEEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHH DLQRAQQTAQPVADALGLPLQLRENLRERSYGAFQGHDNDEIAQRFPDEYAHWQTRDPGF HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHCCCCCCCCC SPPDGESQRALYHRVLHAIEPLVAAHPGGRIACVAHGGVLDCVRRFACGLPLDAPRDYPL CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCE LNTSVNTVDFDNGKATIVTWADVSHLDAPSEDDSFKKAAEPGR ECCCCCEEEECCCCEEEEEECCHHHCCCCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA