| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yjbE [H]
Identifier: 91785104
GI number: 91785104
Start: 4136980
End: 4137684
Strand: Reverse
Name: yjbE [H]
Synonym: Bxe_A0676
Alternate gene names: 91785104
Gene position: 4137684-4136980 (Counterclockwise)
Preceding gene: 91785105
Following gene: 91785103
Centisome position: 84.51
GC content: 64.96
Gene sequence:
>705_bases ATGCTCGAGTTCTTCGCCACGCTCCATTGGGGCGCCGTCATTCAGATTATCGTCATCGACATTCTGCTGGGTGGCGATAA CGCCGTCGTGATCGCGCTGGCCTGCCGCAATTTGCCGCCGTCGCAGCGCACGAAGGGTGTGCTGTGGGGTACGGCCGGCG CAATTGTGCTGCGCGTGGCGTTGATCGCGTTCGCGGTCGTGCTGCTCGACGTGCCGTTGCTGAAGTTCGCGGGTGGCTTG CTGCTGCTGTGGATCGGCGTGCGCCTGATGGCGCCCGCGCACGACGCGCACGAGAACGTGAAGCCGGCCGACAAGCTGGT GTCGGCAATCAAGACCATCATCGTCGCGGACGCGGTGATGAGCCTCGACAACGTGATCGCGATTGCGGGCGCGGCCGAGG CCGCCGATCCCGAACACCGTCTCGCGCTGGTGATTTTCGGCCTGCTGGTGAGCATTCCGTTGATCGTGTGGGGCAGCCAG CTGGTTCTCAAGCTGCTCGACCGCTTCCCGATCGTGATCACGCTCGGCGCCGCATTGCTGGGCTGGATCGCGGGCGGGCT GATCATCAACGACCCGGCCGGCGACCGTTGGCCGATCCTCGATACGCCGTTGGCCGAATATGGCATGAGCATCGCGGGCG CGCTGTTCGTCGTGATACTCGGGTATCTGCTCAAGCGCCGCAATGCCAGTCGCGCGGCGGCTTGA
Upstream 100 bases:
>100_bases CGAGACCCTTTCGTGAGCGTGCGGTTCAAAAAGCGGGGGAGTGCAGACTCCTCCGCTTTTTTATTGGCCGCGCGCCGGAC TTCTTCTTATTCTTTCCATC
Downstream 100 bases:
>100_bases GACTGCGGTTGGTGCCGACACGATTGAATTTCAGCTGGTGTGAACCTGAGCCGACCCATGCTGCAACGTTAGCCATTCGG CTGACTGTCCGACACGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MLEFFATLHWGAVIQIIVIDILLGGDNAVVIALACRNLPPSQRTKGVLWGTAGAIVLRVALIAFAVVLLDVPLLKFAGGL LLLWIGVRLMAPAHDAHENVKPADKLVSAIKTIIVADAVMSLDNVIAIAGAAEAADPEHRLALVIFGLLVSIPLIVWGSQ LVLKLLDRFPIVITLGAALLGWIAGGLIINDPAGDRWPILDTPLAEYGMSIAGALFVVILGYLLKRRNASRAAA
Sequences:
>Translated_234_residues MLEFFATLHWGAVIQIIVIDILLGGDNAVVIALACRNLPPSQRTKGVLWGTAGAIVLRVALIAFAVVLLDVPLLKFAGGL LLLWIGVRLMAPAHDAHENVKPADKLVSAIKTIIVADAVMSLDNVIAIAGAAEAADPEHRLALVIFGLLVSIPLIVWGSQ LVLKLLDRFPIVITLGAALLGWIAGGLIINDPAGDRWPILDTPLAEYGMSIAGALFVVILGYLLKRRNASRAAA >Mature_234_residues MLEFFATLHWGAVIQIIVIDILLGGDNAVVIALACRNLPPSQRTKGVLWGTAGAIVLRVALIAFAVVLLDVPLLKFAGGL LLLWIGVRLMAPAHDAHENVKPADKLVSAIKTIIVADAVMSLDNVIAIAGAAEAADPEHRLALVIFGLLVSIPLIVWGSQ LVLKLLDRFPIVITLGAALLGWIAGGLIINDPAGDRWPILDTPLAEYGMSIAGALFVVILGYLLKRRNASRAAA
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
Organism=Escherichia coli, GI1788119, Length=190, Percent_Identity=26.8421052631579, Blast_Score=61, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005496 - InterPro: IPR022301 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 24730; Mature: 24730
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEFFATLHWGAVIQIIVIDILLGGDNAVVIALACRNLPPSQRTKGVLWGTAGAIVLRVA CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHCCEEEEEHHHHHHHHHH LIAFAVVLLDVPLLKFAGGLLLLWIGVRLMAPAHDAHENVKPADKLVSAIKTIIVADAVM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHH SLDNVIAIAGAAEAADPEHRLALVIFGLLVSIPLIVWGSQLVLKLLDRFPIVITLGAALL HHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH GWIAGGLIINDPAGDRWPILDTPLAEYGMSIAGALFVVILGYLLKRRNASRAAA HHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLEFFATLHWGAVIQIIVIDILLGGDNAVVIALACRNLPPSQRTKGVLWGTAGAIVLRVA CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHCCEEEEEHHHHHHHHHH LIAFAVVLLDVPLLKFAGGLLLLWIGVRLMAPAHDAHENVKPADKLVSAIKTIIVADAVM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHH SLDNVIAIAGAAEAADPEHRLALVIFGLLVSIPLIVWGSQLVLKLLDRFPIVITLGAALL HHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH GWIAGGLIINDPAGDRWPILDTPLAEYGMSIAGALFVVILGYLLKRRNASRAAA HHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]