| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91785007
Identifier: 91785007
GI number: 91785007
Start: 4028883
End: 4029440
Strand: Reverse
Name: 91785007
Synonym: Bxe_A0773
Alternate gene names: NA
Gene position: 4029440-4028883 (Counterclockwise)
Preceding gene: 91785008
Following gene: 91785006
Centisome position: 82.3
GC content: 67.56
Gene sequence:
>558_bases ATGATCTCAAGTCTCAAATCGATACGCGTCGCGCTGCCTGCAGGCGCGGTCGCACTGGCGCTCCTTGGCGGCTGTGCGGT CGTGCCGCCGAGCGGTCCTTCCATTGTCGCGCTGCCGCGCAGCGGCGAGCCGCTTAATCAGTTCCAGCAGGACGACTACT CGTGCCGCGACTACGCTTACCGTTCGTCGGACGCGGCCGGCGCCGCGCAGAGTTCGACTACGAACAGCGTCAATAGCGCT GCCGTCGGCACGCTGGGTGGTGCAGCTGTCGGTGCGCTCATCGGCGCGGCGGCGGGCAACGCCGGCGCGGGTGCGGCAAT TGGCGCGGGCAGCGGCTTGCTGCTCGGCGGCGCGGCCGGCGCAAACGGCGCGCAGTATTCGGCCAACAGCATGCAGGCGC GATACGACGCGGCGTACGCGCAATGCATGACGTCGAAGGGCAATACGATCTCGCAGCCGCAGATGCCGGTGTATGCGCCG CAGCCGGTATATGTTGCGCCGCCGCCCCGTTACTACGGGCCGCCGCCGGTAATCTATGCCCCTTATCCGTACTACTGA
Upstream 100 bases:
>100_bases GGTCTGGATATATAAGAAAAAATACGGTAACTGTCTCGTAAACAAGGCGGACGCAAATTGGCCTAACGTATGTTTCTCCC ATGAAGAAACGTGCGCCCCC
Downstream 100 bases:
>100_bases CCGAGTTCGATCGAGCGCCCGCTGAAGCAAGGCCGCGTCGCCCTCATGTATTGCCCGGTATGGCGGGGGGAGGCGAAACG ATGGCGGCAAACGCCTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MISSLKSIRVALPAGAVALALLGGCAVVPPSGPSIVALPRSGEPLNQFQQDDYSCRDYAYRSSDAAGAAQSSTTNSVNSA AVGTLGGAAVGALIGAAAGNAGAGAAIGAGSGLLLGGAAGANGAQYSANSMQARYDAAYAQCMTSKGNTISQPQMPVYAP QPVYVAPPPRYYGPPPVIYAPYPYY
Sequences:
>Translated_185_residues MISSLKSIRVALPAGAVALALLGGCAVVPPSGPSIVALPRSGEPLNQFQQDDYSCRDYAYRSSDAAGAAQSSTTNSVNSA AVGTLGGAAVGALIGAAAGNAGAGAAIGAGSGLLLGGAAGANGAQYSANSMQARYDAAYAQCMTSKGNTISQPQMPVYAP QPVYVAPPPRYYGPPPVIYAPYPYY >Mature_185_residues MISSLKSIRVALPAGAVALALLGGCAVVPPSGPSIVALPRSGEPLNQFQQDDYSCRDYAYRSSDAAGAAQSSTTNSVNSA AVGTLGGAAVGALIGAAAGNAGAGAAIGAGSGLLLGGAAGANGAQYSANSMQARYDAAYAQCMTSKGNTISQPQMPVYAP QPVYVAPPPRYYGPPPVIYAPYPYY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18365; Mature: 18365
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISSLKSIRVALPAGAVALALLGGCAVVPPSGPSIVALPRSGEPLNQFQQDDYSCRDYAY CCCCCCCEEEECCHHHHHHHHHCCCEEECCCCCCEEEECCCCCHHHHHHCCCCCCHHHHC RSSDAAGAAQSSTTNSVNSAAVGTLGGAAVGALIGAAAGNAGAGAAIGAGSGLLLGGAAG CCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCCCEECCCCCEEEECCCC ANGAQYSANSMQARYDAAYAQCMTSKGNTISQPQMPVYAPQPVYVAPPPRYYGPPPVIYA CCCCEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEC PYPYY CCCCC >Mature Secondary Structure MISSLKSIRVALPAGAVALALLGGCAVVPPSGPSIVALPRSGEPLNQFQQDDYSCRDYAY CCCCCCCEEEECCHHHHHHHHHCCCEEECCCCCCEEEECCCCCHHHHHHCCCCCCHHHHC RSSDAAGAAQSSTTNSVNSAAVGTLGGAAVGALIGAAAGNAGAGAAIGAGSGLLLGGAAG CCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCCCEECCCCCEEEECCCC ANGAQYSANSMQARYDAAYAQCMTSKGNTISQPQMPVYAPQPVYVAPPPRYYGPPPVIYA CCCCEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEC PYPYY CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA