Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is frc [H]

Identifier: 91784998

GI number: 91784998

Start: 4015164

End: 4016555

Strand: Reverse

Name: frc [H]

Synonym: Bxe_A0782

Alternate gene names: 91784998

Gene position: 4016555-4015164 (Counterclockwise)

Preceding gene: 91785003

Following gene: 91784996

Centisome position: 82.04

GC content: 68.75

Gene sequence:

>1392_bases
ATGACGCCTGAACTCGCTCTCAAACATATCTGGACGCTTGCCGGGTGCGACCCGAGCGCGCTGAGGTCTGTCACGCTCAC
GGGCGCGGATCCCGGTTTGCCGTCCGTCTACCGGGTGGGCACCCTCGCTTCGGCAAGCATCGCCGCGACCGGACTCGCGG
CCGCCGAATACCACCGTCTGCGCACAGGTCGCAGGCAACACGTGACGGTGGCGATGCGGCGAGCGCTGGCGTCGTTTCGC
AGCGAACGCTATTTGCGTATCAACGACGGCCCGCCGCCCGCGTTGCGCGATCCGGTGATGGGCTTCTACGAGACGCGCGA
CGGCCGCTGGATTCAACTGCACACGAACTTCCCGCATCATCTGCAGGGCGTATTGAACGTACTTGGCTGCGCGAACGGTC
GGGATGCGGTGGCCGCCGCGATTCGCGGCTGGGACGGCGCGACGCTCGACCAGACGCTCGCCGACGCGGGCCTGTGCGCG
GCGTTGATTCGCACGCCGGATGAGTGGGCCGCGCTCGATCAGGCCAAAGCGATTGCGGGCTTGCCGCTCTTCGAGATCGA
GCGCATCGGCGACGCGCCCACGGAATCGCCCGGTCAGCGTGGCGCGGACCGGCCGCTGGCGGGTGTGCGCGTGCTGGATC
TGTCGCGCATCATCGCCGGGCCCGTCGCCGGCCGTGCGCTCGCGCAGCATGGCGCGCAGGTGCTGATGATCAACGGGCCG
CATCTGCCGAACATTGCGCCGCTGGTGATCGACAACGGTCGCGGCAAGCGCTCGGCGCTCGTCGATCTGCGCGAAGCGCA
GGGGCGCGAGGTTCTGCGCGGCCTTGCCGGCGCCGCCGATGTATTTCTGCAGGCATATCGCCCGGGAGCATTGGCCGCGC
GCGGTTTCGGTCCCGAGGAGCTGGCGCGTATGCGGCCGGGGATCGTCTACGTTTCGGTGTCGGCCTATGGGCACGAGGGA
CCTTGGGCTCAGCGGCGCGGTTTCGACAGTCTGGTGCAGTCGGCAAGCGGAATCGCGTTTACCGAACGCCAGGCGGCGGG
GTGGAACGAGCCGAAGCATCTGCCGTGTCAGGCGCTGGATCATGCGACCGGGTATCTGGCGGCCTTCGGTGCGATGGCCG
CGCTGGCACGGCGGGCAACCGAAGGCGGAAGCTGGCATGTGCGCGTTTCGCTCGCGCAAACGGGCCGGTGGCTGCAGTCG
TTCGGGCAGATTCCCGAGGGCTGGAAAGCGCCCGAGGTCGCGCTCGATGATGTGCGCGATTGCCTCGCGAGCGTGGAGTC
GGAGTTTGGCCGCGTGCTGGGAGTGCAACCGGCCGAGGTGCTGGACGAGACGCCTGCGTTTTTCGCGCTGCCGCCAAGCC
GCGTGGGCGCGCACGAGGCCAGGTGGGAGTGA

Upstream 100 bases:

>100_bases
CGAAGAAATCAATATATGTTGATTATCATAATCAAGATTGATTGCGGCGTGGCGGACTTCTAGACTCGGTGCACTTCCTC
CTGCTCTGTTATGGAACGCC

Downstream 100 bases:

>100_bases
GGTGCCCTTACTTCCTCAATTCCGCCACGAAGTCGTAGTAATCGTTGCGGCAGTACGTGTCGGTCAACTCGATCGCCCGC
TGATCGGCGGTGTAGCCCAC

Product: putative CoA transferase family protein

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 463; Mature: 462

Protein sequence:

>463_residues
MTPELALKHIWTLAGCDPSALRSVTLTGADPGLPSVYRVGTLASASIAATGLAAAEYHRLRTGRRQHVTVAMRRALASFR
SERYLRINDGPPPALRDPVMGFYETRDGRWIQLHTNFPHHLQGVLNVLGCANGRDAVAAAIRGWDGATLDQTLADAGLCA
ALIRTPDEWAALDQAKAIAGLPLFEIERIGDAPTESPGQRGADRPLAGVRVLDLSRIIAGPVAGRALAQHGAQVLMINGP
HLPNIAPLVIDNGRGKRSALVDLREAQGREVLRGLAGAADVFLQAYRPGALAARGFGPEELARMRPGIVYVSVSAYGHEG
PWAQRRGFDSLVQSASGIAFTERQAAGWNEPKHLPCQALDHATGYLAAFGAMAALARRATEGGSWHVRVSLAQTGRWLQS
FGQIPEGWKAPEVALDDVRDCLASVESEFGRVLGVQPAEVLDETPAFFALPPSRVGAHEARWE

Sequences:

>Translated_463_residues
MTPELALKHIWTLAGCDPSALRSVTLTGADPGLPSVYRVGTLASASIAATGLAAAEYHRLRTGRRQHVTVAMRRALASFR
SERYLRINDGPPPALRDPVMGFYETRDGRWIQLHTNFPHHLQGVLNVLGCANGRDAVAAAIRGWDGATLDQTLADAGLCA
ALIRTPDEWAALDQAKAIAGLPLFEIERIGDAPTESPGQRGADRPLAGVRVLDLSRIIAGPVAGRALAQHGAQVLMINGP
HLPNIAPLVIDNGRGKRSALVDLREAQGREVLRGLAGAADVFLQAYRPGALAARGFGPEELARMRPGIVYVSVSAYGHEG
PWAQRRGFDSLVQSASGIAFTERQAAGWNEPKHLPCQALDHATGYLAAFGAMAALARRATEGGSWHVRVSLAQTGRWLQS
FGQIPEGWKAPEVALDDVRDCLASVESEFGRVLGVQPAEVLDETPAFFALPPSRVGAHEARWE
>Mature_462_residues
TPELALKHIWTLAGCDPSALRSVTLTGADPGLPSVYRVGTLASASIAATGLAAAEYHRLRTGRRQHVTVAMRRALASFRS
ERYLRINDGPPPALRDPVMGFYETRDGRWIQLHTNFPHHLQGVLNVLGCANGRDAVAAAIRGWDGATLDQTLADAGLCAA
LIRTPDEWAALDQAKAIAGLPLFEIERIGDAPTESPGQRGADRPLAGVRVLDLSRIIAGPVAGRALAQHGAQVLMINGPH
LPNIAPLVIDNGRGKRSALVDLREAQGREVLRGLAGAADVFLQAYRPGALAARGFGPEELARMRPGIVYVSVSAYGHEGP
WAQRRGFDSLVQSASGIAFTERQAAGWNEPKHLPCQALDHATGYLAAFGAMAALARRATEGGSWHVRVSLAQTGRWLQSF
GQIPEGWKAPEVALDDVRDCLASVESEFGRVLGVQPAEVLDETPAFFALPPSRVGAHEARWE

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=200, Percent_Identity=30.5, Blast_Score=108, Evalue=7e-24,
Organism=Homo sapiens, GI300863124, Length=200, Percent_Identity=30.5, Blast_Score=108, Evalue=8e-24,
Organism=Homo sapiens, GI300863126, Length=147, Percent_Identity=33.3333333333333, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI42794625, Length=210, Percent_Identity=30.4761904761905, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI266456254, Length=210, Percent_Identity=30.4761904761905, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI266458397, Length=210, Percent_Identity=30.4761904761905, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI266458393, Length=210, Percent_Identity=30.4761904761905, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI42822893, Length=133, Percent_Identity=34.5864661654135, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI266458395, Length=133, Percent_Identity=34.5864661654135, Blast_Score=75, Evalue=1e-13,
Organism=Escherichia coli, GI87082093, Length=145, Percent_Identity=27.5862068965517, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1788717, Length=200, Percent_Identity=28.5, Blast_Score=80, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI32564160, Length=204, Percent_Identity=30.8823529411765, Blast_Score=79, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI115535051, Length=204, Percent_Identity=31.3725490196078, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24648431, Length=189, Percent_Identity=34.3915343915344, Blast_Score=108, Evalue=6e-24,
Organism=Drosophila melanogaster, GI24585488, Length=263, Percent_Identity=26.9961977186312, Blast_Score=80, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 49540; Mature: 49409

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPELALKHIWTLAGCDPSALRSVTLTGADPGLPSVYRVGTLASASIAATGLAAAEYHRL
CCHHHHHHHHHHHCCCCHHHHCEEEEECCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHH
RTGRRQHVTVAMRRALASFRSERYLRINDGPPPALRDPVMGFYETRDGRWIQLHTNFPHH
HCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHCCCCHHEECCCCCEEEEECCCCHH
LQGVLNVLGCANGRDAVAAAIRGWDGATLDQTLADAGLCAALIRTPDEWAALDQAKAIAG
HHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
LPLFEIERIGDAPTESPGQRGADRPLAGVRVLDLSRIIAGPVAGRALAQHGAQVLMINGP
CCHHHHHHCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCHHHHHHHHHCCCEEEEECCC
HLPNIAPLVIDNGRGKRSALVDLREAQGREVLRGLAGAADVFLQAYRPGALAARGFGPEE
CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHH
LARMRPGIVYVSVSAYGHEGPWAQRRGFDSLVQSASGIAFTERQAAGWNEPKHLPCQALD
HHHHCCCEEEEEEEECCCCCCCHHHCCHHHHHHHCCCCEEECHHCCCCCCCCCCCHHHHH
HATGYLAAFGAMAALARRATEGGSWHVRVSLAQTGRWLQSFGQIPEGWKAPEVALDDVRD
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
CLASVESEFGRVLGVQPAEVLDETPAFFALPPSRVGAHEARWE
HHHHHHHHHHHCCCCCHHHHHHCCCCEEECCCHHCCCCCCCCC
>Mature Secondary Structure 
TPELALKHIWTLAGCDPSALRSVTLTGADPGLPSVYRVGTLASASIAATGLAAAEYHRL
CHHHHHHHHHHHCCCCHHHHCEEEEECCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHH
RTGRRQHVTVAMRRALASFRSERYLRINDGPPPALRDPVMGFYETRDGRWIQLHTNFPHH
HCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHCCCCHHEECCCCCEEEEECCCCHH
LQGVLNVLGCANGRDAVAAAIRGWDGATLDQTLADAGLCAALIRTPDEWAALDQAKAIAG
HHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
LPLFEIERIGDAPTESPGQRGADRPLAGVRVLDLSRIIAGPVAGRALAQHGAQVLMINGP
CCHHHHHHCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCHHHHHHHHHCCCEEEEECCC
HLPNIAPLVIDNGRGKRSALVDLREAQGREVLRGLAGAADVFLQAYRPGALAARGFGPEE
CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHH
LARMRPGIVYVSVSAYGHEGPWAQRRGFDSLVQSASGIAFTERQAAGWNEPKHLPCQALD
HHHHCCCEEEEEEEECCCCCCCHHHCCHHHHHHHCCCCEEECHHCCCCCCCCCCCHHHHH
HATGYLAAFGAMAALARRATEGGSWHVRVSLAQTGRWLQSFGQIPEGWKAPEVALDDVRD
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
CLASVESEFGRVLGVQPAEVLDETPAFFALPPSRVGAHEARWE
HHHHHHHHHHHCCCCCHHHHHHCCCCEEECCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]