| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is livK [C]
Identifier: 91784959
GI number: 91784959
Start: 3969679
End: 3970878
Strand: Reverse
Name: livK [C]
Synonym: Bxe_A0821
Alternate gene names: 91784959
Gene position: 3970878-3969679 (Counterclockwise)
Preceding gene: 91784960
Following gene: 91784958
Centisome position: 81.11
GC content: 61.0
Gene sequence:
>1200_bases ATGCGAGTCAAGTTTGCTTACGCCGTGTCCATCGCGGCCGCGGTTGCGATGCTGACCGCGTGCGGCAAGAAACAGGATGG CGAGGCGGGAGCGGGTGCATCCGCGGCTGTGGCCGCAGCGGCACCGGCGAGTGAAGCGACTATCGTGAAGATCGGTCATG CGGCCCCTTTGACGGGCGGCATAGCGCATCTGGGCAAGGACAACGAAAACGGCGCGCGTCTGGCGGTCGAGGAAATCAAT ACGCAGGGTTTGACCATCGACGGTCACAAGATCCAGTTGGAGCTGGATGCGCAAGACGACGCAGCGGACCCGAAAACGGG CACGGCGGTCGCGCAGAAGCTGGTCGACGATCATGTGGTGGCGGTGGTGGGGCACCTGAATTCGGGCGTGTCGATTCCGG CTTCGAAGATCTATAGCGATGCGAGCATCGTGCAGATCTCGCCGTCGTCGACGAATCCGGCGTACACGCTGCAGGGTTTC AAGACGACCTACCGGGTCGTCGCCACCGACGCGCAACAAGGTCCGGCGCTCGCCGATTACGCCACGAAGGCGTTGGGCGC CAAACGCATCGCCATAGTGGACGATGCAACCGCCTACGGTAAGGGGCTCGCGGACGAATTCGCGAAGACCGTACAGGCGA GCGGAGCGAAGATCGTCGCGCGGGAAGCGACGAACGACAGGGCCACGGATTTCCGGGCCATCCTCACGAAGATCAAGAGT GTTCAGCCGGACGTGATCATGTTCGGCGGCATGGACGCGACGGGCGGGCCGTTTACCAAACAGGCGGCGGCGCTCGGTAT CAGGGCAAAAATCCTTGGCGGCGACGGTGTGTGTACCGACAAGGTGGGTGAGCTGGCAGGAACCGCCGTGCAAAACCTGG TCTGTTCGGAGGCGGGACTCGCGCTTTCGAAAATGGACAAGGGAGCGGACTTCGAAAAGAAGTACGTGGACCGCTTCCAC ACACCGGTGCAGATTTACGCGCCGTTCACGTATGACGCTGTGTACGTGATTGTCGATGCAATGAAGCGCGCTAATTCGAT CGAGGCGCCCAAGGTGCTGGCTGCGATGCCGTCGACCGATTACAACGGGGTAATCGGTCACATCGCGTTCGACGACAAGG GTGATTTGAAAGAGGGCGCCATTACGCTTTACGACTTCAAGGACGGCAAGAAAGCGGTCCTCGACGTCGTAAAGATGTGA
Upstream 100 bases:
>100_bases ACAATATTGCCCGTCGCAAAATTGGAGTTACAATGCGCGCGTTCTCAAGGCCTCAGGGTCTCCGAACAATAGATTTTGCA AGGCGCAGGAGACCTATTTA
Downstream 100 bases:
>100_bases TGACGGGACGTTCAGCCTGACGGCACCGAAACCACCCAACGGTGCCGTTTTTGCATCCGCCCAAGGCGAGCCCGCGACTG TCATCCAGTCGCCAAGGCGA
Product: branched chain amino acid ABC transporter periplasmic ligand-binding protein
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MRVKFAYAVSIAAAVAMLTACGKKQDGEAGAGASAAVAAAAPASEATIVKIGHAAPLTGGIAHLGKDNENGARLAVEEIN TQGLTIDGHKIQLELDAQDDAADPKTGTAVAQKLVDDHVVAVVGHLNSGVSIPASKIYSDASIVQISPSSTNPAYTLQGF KTTYRVVATDAQQGPALADYATKALGAKRIAIVDDATAYGKGLADEFAKTVQASGAKIVAREATNDRATDFRAILTKIKS VQPDVIMFGGMDATGGPFTKQAAALGIRAKILGGDGVCTDKVGELAGTAVQNLVCSEAGLALSKMDKGADFEKKYVDRFH TPVQIYAPFTYDAVYVIVDAMKRANSIEAPKVLAAMPSTDYNGVIGHIAFDDKGDLKEGAITLYDFKDGKKAVLDVVKM
Sequences:
>Translated_399_residues MRVKFAYAVSIAAAVAMLTACGKKQDGEAGAGASAAVAAAAPASEATIVKIGHAAPLTGGIAHLGKDNENGARLAVEEIN TQGLTIDGHKIQLELDAQDDAADPKTGTAVAQKLVDDHVVAVVGHLNSGVSIPASKIYSDASIVQISPSSTNPAYTLQGF KTTYRVVATDAQQGPALADYATKALGAKRIAIVDDATAYGKGLADEFAKTVQASGAKIVAREATNDRATDFRAILTKIKS VQPDVIMFGGMDATGGPFTKQAAALGIRAKILGGDGVCTDKVGELAGTAVQNLVCSEAGLALSKMDKGADFEKKYVDRFH TPVQIYAPFTYDAVYVIVDAMKRANSIEAPKVLAAMPSTDYNGVIGHIAFDDKGDLKEGAITLYDFKDGKKAVLDVVKM >Mature_399_residues MRVKFAYAVSIAAAVAMLTACGKKQDGEAGAGASAAVAAAAPASEATIVKIGHAAPLTGGIAHLGKDNENGARLAVEEIN TQGLTIDGHKIQLELDAQDDAADPKTGTAVAQKLVDDHVVAVVGHLNSGVSIPASKIYSDASIVQISPSSTNPAYTLQGF KTTYRVVATDAQQGPALADYATKALGAKRIAIVDDATAYGKGLADEFAKTVQASGAKIVAREATNDRATDFRAILTKIKS VQPDVIMFGGMDATGGPFTKQAAALGIRAKILGGDGVCTDKVGELAGTAVQNLVCSEAGLALSKMDKGADFEKKYVDRFH TPVQIYAPFTYDAVYVIVDAMKRANSIEAPKVLAAMPSTDYNGVIGHIAFDDKGDLKEGAITLYDFKDGKKAVLDVVKM
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=334, Percent_Identity=32.6347305389222, Blast_Score=170, Evalue=2e-43, Organism=Escherichia coli, GI48994941, Length=342, Percent_Identity=28.9473684210526, Blast_Score=151, Evalue=8e-38,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 41347; Mature: 41347
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVKFAYAVSIAAAVAMLTACGKKQDGEAGAGASAAVAAAAPASEATIVKIGHAAPLTGG CEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEECCCCCCCEEEEECCCCCCCCC IAHLGKDNENGARLAVEEINTQGLTIDGHKIQLELDAQDDAADPKTGTAVAQKLVDDHVV HHHCCCCCCCCCEEEEEECCCCCEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHE AVVGHLNSGVSIPASKIYSDASIVQISPSSTNPAYTLQGFKTTYRVVATDAQQGPALADY EEEECCCCCCCCCHHHHCCCCEEEEECCCCCCCCEEEECCCEEEEEEEECCCCCCCHHHH ATKALGAKRIAIVDDATAYGKGLADEFAKTVQASGAKIVAREATNDRATDFRAILTKIKS HHHHCCCCEEEEEECCHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHC VQPDVIMFGGMDATGGPFTKQAAALGIRAKILGGDGVCTDKVGELAGTAVQNLVCSEAGL CCCCEEEEECCCCCCCCCHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC ALSKMDKGADFEKKYVDRFHTPVQIYAPFTYDAVYVIVDAMKRANSIEAPKVLAAMPSTD CHHHHCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCC YNGVIGHIAFDDKGDLKEGAITLYDFKDGKKAVLDVVKM CCCEEEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHCC >Mature Secondary Structure MRVKFAYAVSIAAAVAMLTACGKKQDGEAGAGASAAVAAAAPASEATIVKIGHAAPLTGG CEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEECCCCCCCEEEEECCCCCCCCC IAHLGKDNENGARLAVEEINTQGLTIDGHKIQLELDAQDDAADPKTGTAVAQKLVDDHVV HHHCCCCCCCCCEEEEEECCCCCEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHE AVVGHLNSGVSIPASKIYSDASIVQISPSSTNPAYTLQGFKTTYRVVATDAQQGPALADY EEEECCCCCCCCCHHHHCCCCEEEEECCCCCCCCEEEECCCEEEEEEEECCCCCCCHHHH ATKALGAKRIAIVDDATAYGKGLADEFAKTVQASGAKIVAREATNDRATDFRAILTKIKS HHHHCCCCEEEEEECCHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHC VQPDVIMFGGMDATGGPFTKQAAALGIRAKILGGDGVCTDKVGELAGTAVQNLVCSEAGL CCCCEEEEECCCCCCCCCHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC ALSKMDKGADFEKKYVDRFHTPVQIYAPFTYDAVYVIVDAMKRANSIEAPKVLAAMPSTD CHHHHCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCC YNGVIGHIAFDDKGDLKEGAITLYDFKDGKKAVLDVVKM CCCEEEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA