The gene/protein map for NC_007951 is currently unavailable.
Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

Click here to switch to the map view.

The map label for this gene is 91784935

Identifier: 91784935

GI number: 91784935

Start: 3945034

End: 3946668

Strand: Reverse

Name: 91784935

Synonym: Bxe_A0845

Alternate gene names: NA

Gene position: 3946668-3945034 (Counterclockwise)

Preceding gene: 91784936

Following gene: 91784934

Centisome position: 80.61

GC content: 63.06

Gene sequence:

>1635_bases
ATGGCGCAGATTTACCCGGCCGGCTGGCGTGATGCGATCGTGAGCGGCGCAGCGAAGCGCGAGATCGAAACGCTCGGCGT
TCTTCATCGCGACCTGCCCGACACTTACGCCGTCTATCATGGCGTGCACTGGACGCAGCTGAACAAAGGCTTTTCCATTT
TCGGCGAGGCCGACTTCGTCGTGGTCAGCCCGGCTGGGCGTGTGCTCGTGATCGAGCAGAAGTCGGGGGCCCTCGAAGAG
ACGCCGGACGGTCTCGTGAAGCTTTATGCCGGCAGGGGCAAGAGCGTGCATTCGCAGATTGCGCGCACCATCGGTGGTAT
GCACAAGCGCTTTTCCAGCGCGTTCGGCGCACGGAACTATAAGCTCGAAGAAATGCTGTACTGCCCGGACTATCGGGTGA
ACGATCCGGCAATCTCCGGTGTCAATCCCGAGCGGATCGTCGACGCGACGCGCAGCGATCAACTCGCGCAGATCGTCGAA
CGCATTCTGCCTGCCGACGAGCCGGCGCAGCCTTGCCTGCCACGCCTGCATGCGTTTCTTGCCGACGAACTCTCGCTGAC
ACCGGATGTCCGCTCGATGATTGGCGAGATCAACAGGCACGTTACGCGCGTGTCTGGCGGCCTGGCCACCTGGGCGCGTT
CGATCGAATTCGAGCCTTTCAGGCTGCGCGTGATCGGCACCGCGGGCTCGGGCAAGACGCAACTCGCGGTGCGGGTGCTC
GACGACGCTGTCAAGGCAGGCCGGCGCGCGCTCTACCTGTGCTTCAACCGGCCGCTTGCCGATCATCTCCGGCGTATCGC
GTCCGAGGGCGCAACCGTTCTCACGTACCACCAGCTTTGCCAACTGGCGGCCGCGCGCCAAGGGCATGCAATCGACTTTG
GCGACGCCGGTGTGTTCGGGTTGCTCGAGCGGGCACTCCTCGACATGCATTTCGACGAATCCGAGCGTTTCGATACGGTG
ATCGTCGACGAAGGGCAGGACTTCCGCCAGGCGTGGGTGGCGCCGATCGAACGATTGTTGCGCCAGGACGGCCGCTTCTG
GTGGCTGGAAGATCCGATGCAGAATCTGTACTTGCGCAAGAGCGTCGAACTGCCGGGTTGGGTCGAAGTGCGTGCAATGG
CCAATCACCGTAGCCCGCATGACGTCGTGCAGTTTATCGACATGCTCTCGGACGCGCCCATGAAGATCGAGGTGGCCGGA
CCGTTCACCCGATCGGATCTCCGCACGATGACCTACGCGGGCAGCAATGCGACGCAGGCCACCCTGGAAGCGCTCGACGA
AGCGATGTCGGCCGGCTTTTCGCCATCGGACATCGCGCTGCTGACGTTCAGCGGCCGTGACAAGTCGCTGTTGCTGGCGC
TCGACCGGCTCGGCCGTCATCGGTTGCGCAGTTTCTCCGGCGCGTATGACGGACAAGGGTCGCCACGCTATCGCGACGGC
GACATCACGGCAGAAACTGTCTATCGCTTCAAAGGGCAGAGCGCGCCTTGCGTGATCCTGACCGAGGTCGACTTCGAACA
GTTCGACGACGCGGTGTTCCGGCGTCTGTTCGTCGGTGCCACGCGTGCGACGATGAAGCTGATCGTCGTGATGTCCGAAC
GCGCGGAGGCGCAACTGATTCGGCGATTGTCGTAG

Upstream 100 bases:

>100_bases
TCGCTGTCGAAAGAGGTGGTCTCGCGCTGCACTATCCGGTGCTCAGGCCCGACAGCGCGAACATCTACAGTAAATAACGG
TCAGCGGGAGACAGCGACAT

Downstream 100 bases:

>100_bases
CGCATGCGGTAGGGGCCTGTCCGGTATCGTGCGGCGGCGCGATCATGCGCGGCAGCTCGCGACTCACGTGGCCCTGTATC
GCGTCGCGAGTCGGGACACA

Product: hypothetical protein

Products: NA

Alternate protein names: NERD Domain-Containing Protein; Nerd Domain Protein; AAA ATPase; Helicase; Nuclease-Related Domain Family

Number of amino acids: Translated: 544; Mature: 543

Protein sequence:

>544_residues
MAQIYPAGWRDAIVSGAAKREIETLGVLHRDLPDTYAVYHGVHWTQLNKGFSIFGEADFVVVSPAGRVLVIEQKSGALEE
TPDGLVKLYAGRGKSVHSQIARTIGGMHKRFSSAFGARNYKLEEMLYCPDYRVNDPAISGVNPERIVDATRSDQLAQIVE
RILPADEPAQPCLPRLHAFLADELSLTPDVRSMIGEINRHVTRVSGGLATWARSIEFEPFRLRVIGTAGSGKTQLAVRVL
DDAVKAGRRALYLCFNRPLADHLRRIASEGATVLTYHQLCQLAAARQGHAIDFGDAGVFGLLERALLDMHFDESERFDTV
IVDEGQDFRQAWVAPIERLLRQDGRFWWLEDPMQNLYLRKSVELPGWVEVRAMANHRSPHDVVQFIDMLSDAPMKIEVAG
PFTRSDLRTMTYAGSNATQATLEALDEAMSAGFSPSDIALLTFSGRDKSLLLALDRLGRHRLRSFSGAYDGQGSPRYRDG
DITAETVYRFKGQSAPCVILTEVDFEQFDDAVFRRLFVGATRATMKLIVVMSERAEAQLIRRLS

Sequences:

>Translated_544_residues
MAQIYPAGWRDAIVSGAAKREIETLGVLHRDLPDTYAVYHGVHWTQLNKGFSIFGEADFVVVSPAGRVLVIEQKSGALEE
TPDGLVKLYAGRGKSVHSQIARTIGGMHKRFSSAFGARNYKLEEMLYCPDYRVNDPAISGVNPERIVDATRSDQLAQIVE
RILPADEPAQPCLPRLHAFLADELSLTPDVRSMIGEINRHVTRVSGGLATWARSIEFEPFRLRVIGTAGSGKTQLAVRVL
DDAVKAGRRALYLCFNRPLADHLRRIASEGATVLTYHQLCQLAAARQGHAIDFGDAGVFGLLERALLDMHFDESERFDTV
IVDEGQDFRQAWVAPIERLLRQDGRFWWLEDPMQNLYLRKSVELPGWVEVRAMANHRSPHDVVQFIDMLSDAPMKIEVAG
PFTRSDLRTMTYAGSNATQATLEALDEAMSAGFSPSDIALLTFSGRDKSLLLALDRLGRHRLRSFSGAYDGQGSPRYRDG
DITAETVYRFKGQSAPCVILTEVDFEQFDDAVFRRLFVGATRATMKLIVVMSERAEAQLIRRLS
>Mature_543_residues
AQIYPAGWRDAIVSGAAKREIETLGVLHRDLPDTYAVYHGVHWTQLNKGFSIFGEADFVVVSPAGRVLVIEQKSGALEET
PDGLVKLYAGRGKSVHSQIARTIGGMHKRFSSAFGARNYKLEEMLYCPDYRVNDPAISGVNPERIVDATRSDQLAQIVER
ILPADEPAQPCLPRLHAFLADELSLTPDVRSMIGEINRHVTRVSGGLATWARSIEFEPFRLRVIGTAGSGKTQLAVRVLD
DAVKAGRRALYLCFNRPLADHLRRIASEGATVLTYHQLCQLAAARQGHAIDFGDAGVFGLLERALLDMHFDESERFDTVI
VDEGQDFRQAWVAPIERLLRQDGRFWWLEDPMQNLYLRKSVELPGWVEVRAMANHRSPHDVVQFIDMLSDAPMKIEVAGP
FTRSDLRTMTYAGSNATQATLEALDEAMSAGFSPSDIALLTFSGRDKSLLLALDRLGRHRLRSFSGAYDGQGSPRYRDGD
ITAETVYRFKGQSAPCVILTEVDFEQFDDAVFRRLFVGATRATMKLIVVMSERAEAQLIRRLS

Specific function: Unknown

COG id: COG0210

COG function: function code L; Superfamily I DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60638; Mature: 60507

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQIYPAGWRDAIVSGAAKREIETLGVLHRDLPDTYAVYHGVHWTQLNKGFSIFGEADFV
CCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHCCCEEEECCCCCEEECCCCEE
VVSPAGRVLVIEQKSGALEETPDGLVKLYAGRGKSVHSQIARTIGGMHKRFSSAFGARNY
EECCCCCEEEEECCCCCCCCCCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
KLEEMLYCPDYRVNDPAISGVNPERIVDATRSDQLAQIVERILPADEPAQPCLPRLHAFL
CHHHEEECCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHH
ADELSLTPDVRSMIGEINRHVTRVSGGLATWARSIEFEPFRLRVIGTAGSGKTQLAVRVL
HHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHH
DDAVKAGRRALYLCFNRPLADHLRRIASEGATVLTYHQLCQLAAARQGHAIDFGDAGVFG
HHHHHCCCEEEEEEECCCHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCEEECCCCCHHH
LLERALLDMHFDESERFDTVIVDEGQDFRQAWVAPIERLLRQDGRFWWLEDPMQNLYLRK
HHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHH
SVELPGWVEVRAMANHRSPHDVVQFIDMLSDAPMKIEVAGPFTRSDLRTMTYAGSNATQA
CCCCCCCEEEEEHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHEEEECCCCHHHH
TLEALDEAMSAGFSPSDIALLTFSGRDKSLLLALDRLGRHRLRSFSGAYDGQGSPRYRDG
HHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
DITAETVYRFKGQSAPCVILTEVDFEQFDDAVFRRLFVGATRATMKLIVVMSERAEAQLI
CCCHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHHEEEEEEECCHHHHHHH
RRLS
HHCC
>Mature Secondary Structure 
AQIYPAGWRDAIVSGAAKREIETLGVLHRDLPDTYAVYHGVHWTQLNKGFSIFGEADFV
CCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHCCCEEEECCCCCEEECCCCEE
VVSPAGRVLVIEQKSGALEETPDGLVKLYAGRGKSVHSQIARTIGGMHKRFSSAFGARNY
EECCCCCEEEEECCCCCCCCCCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
KLEEMLYCPDYRVNDPAISGVNPERIVDATRSDQLAQIVERILPADEPAQPCLPRLHAFL
CHHHEEECCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHH
ADELSLTPDVRSMIGEINRHVTRVSGGLATWARSIEFEPFRLRVIGTAGSGKTQLAVRVL
HHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHH
DDAVKAGRRALYLCFNRPLADHLRRIASEGATVLTYHQLCQLAAARQGHAIDFGDAGVFG
HHHHHCCCEEEEEEECCCHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCEEECCCCCHHH
LLERALLDMHFDESERFDTVIVDEGQDFRQAWVAPIERLLRQDGRFWWLEDPMQNLYLRK
HHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHH
SVELPGWVEVRAMANHRSPHDVVQFIDMLSDAPMKIEVAGPFTRSDLRTMTYAGSNATQA
CCCCCCCEEEEEHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHEEEECCCCHHHH
TLEALDEAMSAGFSPSDIALLTFSGRDKSLLLALDRLGRHRLRSFSGAYDGQGSPRYRDG
HHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
DITAETVYRFKGQSAPCVILTEVDFEQFDDAVFRRLFVGATRATMKLIVVMSERAEAQLI
CCCHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHHEEEEEEECCHHHHHHH
RRLS
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA